RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 LRRC72A6NJI9 287 aa13.6□□□□□ -0.23
SSR1-208ENST00000483409 INSIG1O15503 277 aa13.6□□□□□ -0.23
SSR1-208ENST00000483409 PALMO75781 387 aa13.6□□□□□ -0.23
SSR1-208ENST00000483409 MAP3K6O95382 1288 aa13.6□□□□□ -0.23
SSR1-208ENST00000483409 KRT1P04264 644 aa13.6□□□□□ -0.23
SSR1-208ENST00000483409 UGT2B4P06133 528 aa13.6□□□□□ -0.23
SSR1-208ENST00000483409 HOXD12P35452 270 aa13.6□□□□□ -0.23
SSR1-208ENST00000483409 VAV2P52735 878 aa13.6□□□□□ -0.23
SSR1-208ENST00000483409 IRX4P78413 519 aa13.6□□□□□ -0.23
SSR1-208ENST00000483409 IL10RBQ08334 325 aa13.6□□□□□ -0.23
SSR1-208ENST00000483409 DUOXA1Q1HG43 343 aa13.6□□□□□ -0.23
SSR1-208ENST00000483409 MYLK3Q32MK0 819 aa13.6□□□□□ -0.23
SSR1-208ENST00000483409 PIP5KL1Q5T9C9 394 aa13.6□□□□□ -0.23
SSR1-208ENST00000483409 NCBP2-AS2Q69YL0 99 aa13.6□□□□□ -0.23
SSR1-208ENST00000483409 RHOT1Q8IXI2 618 aa13.6□□□□□ -0.23
SSR1-208ENST00000483409 PLPP6Q8IY26 295 aa13.6□□□□□ -0.23
SSR1-208ENST00000483409 ATPAF2Q8N5M1 289 aa13.6□□□□□ -0.23
SSR1-208ENST00000483409 OR2T34Q8NGX1 318 aa13.6□□□□□ -0.23
SSR1-208ENST00000483409 TPCN2Q8NHX9 752 aa13.6□□□□□ -0.23
SSR1-208ENST00000483409 FAM131CQ96AQ9 280 aa13.6□□□□□ -0.23
SSR1-208ENST00000483409 FAF2Q96CS3 445 aa13.6□□□□□ -0.23
SSR1-208ENST00000483409 PPP1R16AQ96I34 528 aa13.6□□□□□ -0.23
SSR1-208ENST00000483409 EDEM2Q9BV94 578 aa13.6□□□□□ -0.23
SSR1-208ENST00000483409 LACRTQ9GZZ8 138 aa13.6□□□□□ -0.23
SSR1-208ENST00000483409 ALG6Q9Y672 507 aa13.6□□□□□ -0.23
SSR1-208ENST00000483409 SLCO1B1Q9Y6L6 691 aa13.6□□□□□ -0.23
SSR1-208ENST00000483409 DUSP10Q9Y6W6 482 aa13.6□□□□□ -0.23
SSR1-208ENST00000483409 LRRK1Q38SD2 2015 aa13.59□□□□□ -0.23
SSR1-208ENST00000483409 TBC1D3DA0A087WVF3 549 aa13.59□□□□□ -0.23
SSR1-208ENST00000483409 TBC1D3IA0A087WXS9 549 aa13.59□□□□□ -0.23
SSR1-208ENST00000483409 TBC1D3EA0A087X179 549 aa13.59□□□□□ -0.23
SSR1-208ENST00000483409 TBC1D3KA0A087X1G2 549 aa13.59□□□□□ -0.23
SSR1-208ENST00000483409 TBC1D3FA6NER0 549 aaPredicted RBP13.59□□□□□ -0.23
SSR1-208ENST00000483409 TBC1D3LB9A6J9 549 aa13.59□□□□□ -0.23
SSR1-208ENST00000483409 SLC7A4O43246 635 aa13.59□□□□□ -0.23
SSR1-208ENST00000483409 PLRG1O43660 514 aaKnown RBP13.59□□□□□ -0.23
SSR1-208ENST00000483409 FOXD2O60548 495 aaPredicted RBP13.59□□□□□ -0.23
SSR1-208ENST00000483409 POP4O95707 220 aaKnown RBP13.59□□□□□ -0.23
SSR1-208ENST00000483409 IGHV4-34P06331 123 aa13.59□□□□□ -0.23
SSR1-208ENST00000483409 TBC1D3HP0C7X1 549 aa13.59□□□□□ -0.23
SSR1-208ENST00000483409 GNSP15586 552 aa13.59□□□□□ -0.23
SSR1-208ENST00000483409 ITGB7P26010 798 aa13.59□□□□□ -0.23
SSR1-208ENST00000483409 NAP1L1P55209 391 aaKnown RBP13.59□□□□□ -0.23
SSR1-208ENST00000483409 GSDMDP57764 484 aa13.59□□□□□ -0.23
SSR1-208ENST00000483409 TAS2R38P59533 333 aa13.59□□□□□ -0.23
SSR1-208ENST00000483409 PPP2CBP62714 309 aa13.59□□□□□ -0.23
SSR1-208ENST00000483409 PPP2CAP67775 309 aa13.59□□□□□ -0.23
SSR1-208ENST00000483409 ODF2Q5BJF6 829 aa13.59□□□□□ -0.23
SSR1-208ENST00000483409 LRRC38Q5VT99 294 aa13.59□□□□□ -0.23
SSR1-208ENST00000483409 TBC1D3GQ6DHY5 549 aa13.59□□□□□ -0.23
SSR1-208ENST00000483409 TBC1D3CQ6IPX1 549 aa13.59□□□□□ -0.23
SSR1-208ENST00000483409 SLC23A3Q6PIS1 610 aa13.59□□□□□ -0.23
SSR1-208ENST00000483409 ERN2Q76MJ5 926 aaKnown RBP13.59□□□□□ -0.23
SSR1-208ENST00000483409 PARS2Q7L3T8 475 aaKnown RBP13.59□□□□□ -0.23
SSR1-208ENST00000483409 DAAM2Q86T65 1068 aa13.59□□□□□ -0.23
SSR1-208ENST00000483409 TBC1D3Q8IZP1 549 aaPredicted RBP13.59□□□□□ -0.23
SSR1-208ENST00000483409 PQLC3Q8N755 202 aa13.59□□□□□ -0.23
SSR1-208ENST00000483409 TSEN2Q8NCE0 465 aaKnown RBP13.59□□□□□ -0.23
SSR1-208ENST00000483409 CEP76Q8TAP6 659 aa13.59□□□□□ -0.23
SSR1-208ENST00000483409 VOPP1Q96AW1 172 aa13.59□□□□□ -0.23
SSR1-208ENST00000483409 RNF25Q96BH1 459 aaPredicted RBP13.59□□□□□ -0.23
SSR1-208ENST00000483409 RNF157Q96PX1 679 aa13.59□□□□□ -0.23
SSR1-208ENST00000483409 CINPQ9BW66 212 aaPredicted RBP13.59□□□□□ -0.23
SSR1-208ENST00000483409 NUSAP1Q9BXS6 441 aaKnown RBP13.59□□□□□ -0.23
SSR1-208ENST00000483409 GRPEL1Q9HAV7 217 aa13.59□□□□□ -0.23
SSR1-208ENST00000483409 SUSD2Q9UGT4 822 aa13.59□□□□□ -0.23
SSR1-208ENST00000483409 A0A0U1RQJ8 604 aa13.58□□□□□ -0.24
SSR1-208ENST00000483409 C3orf70A6NLC5 250 aaPredicted RBP13.58□□□□□ -0.24
SSR1-208ENST00000483409 PRR5-ARHGAP8B1AHC4 643 aa13.58□□□□□ -0.24
SSR1-208ENST00000483409 BCAT2O15382 392 aaPredicted RBP13.58□□□□□ -0.24
SSR1-208ENST00000483409 PJA2O43164 708 aa13.58□□□□□ -0.24
SSR1-208ENST00000483409 PSTPIP1O43586 416 aa13.58□□□□□ -0.24
SSR1-208ENST00000483409 MAFKO60675 156 aa13.58□□□□□ -0.24
SSR1-208ENST00000483409 PIGNO95427 931 aa13.58□□□□□ -0.24
SSR1-208ENST00000483409 SERPINF2P08697 491 aa13.58□□□□□ -0.24
SSR1-208ENST00000483409 MAT2AP31153 395 aaKnown RBP13.58□□□□□ -0.24
SSR1-208ENST00000483409 RGRP47804 291 aa13.58□□□□□ -0.24
SSR1-208ENST00000483409 MARCKSL1P49006 195 aa13.58□□□□□ -0.24
SSR1-208ENST00000483409 NEK3P51956 506 aa13.58□□□□□ -0.24
SSR1-208ENST00000483409 ARHGAP8P85298 464 aa13.58□□□□□ -0.24
SSR1-208ENST00000483409 GBE1Q04446 702 aa13.58□□□□□ -0.24
SSR1-208ENST00000483409 RAD51Q06609 339 aa13.58□□□□□ -0.24
SSR1-208ENST00000483409 RFTN1Q14699 578 aaPredicted RBP13.58□□□□□ -0.24
SSR1-208ENST00000483409 LBRQ14739 615 aaKnown RBP13.58□□□□□ -0.24
SSR1-208ENST00000483409 PAFAH1B3Q15102 231 aaKnown RBP13.58□□□□□ -0.24
SSR1-208ENST00000483409 RSPO4Q2I0M5 234 aaPredicted RBP13.58□□□□□ -0.24
SSR1-208ENST00000483409 ZNF805Q5CZA5 627 aa13.58□□□□□ -0.24
SSR1-208ENST00000483409 TMCO4Q5TGY1 634 aa13.58□□□□□ -0.24
SSR1-208ENST00000483409 C11orf63Q6NUN7 778 aa13.58□□□□□ -0.24
SSR1-208ENST00000483409 RABEPKQ7Z6M1 372 aa13.58□□□□□ -0.24
SSR1-208ENST00000483409 PIAS4Q8N2W9 510 aaPredicted RBP13.58□□□□□ -0.24
SSR1-208ENST00000483409 LRIG1Q96JA1 1093 aa13.58□□□□□ -0.24
SSR1-208ENST00000483409 KLHL32Q96NJ5 620 aa13.58□□□□□ -0.24
SSR1-208ENST00000483409 OSBPL1AQ9BXW6 950 aa13.58□□□□□ -0.24
SSR1-208ENST00000483409 HDAC8Q9BY41 377 aa13.58□□□□□ -0.24
SSR1-208ENST00000483409 EBF2Q9HAK2 575 aa13.58□□□□□ -0.24
SSR1-208ENST00000483409 DDX56Q9NY93 547 aaKnown RBP13.58□□□□□ -0.24
SSR1-208ENST00000483409 TRIM10Q9UDY6 481 aa13.58□□□□□ -0.24
SSR1-208ENST00000483409 CDV3Q9UKY7 258 aaKnown RBP13.58□□□□□ -0.24
SSR1-208ENST00000483409 SLC6A14Q9UN76 642 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms