RNA–Protein interactions for RNA: ENST00000480836.5

PTPN7-212, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,189 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-212ENST00000480836 C16orf96A6NNT2 1141 aa13.53□□□□□ -0.24
PTPN7-212ENST00000480836 SCAMP1O15126 338 aa13.53□□□□□ -0.24
PTPN7-212ENST00000480836 GCATO75600 419 aa13.53□□□□□ -0.24
PTPN7-212ENST00000480836 GFPT2O94808 682 aa13.53□□□□□ -0.24
PTPN7-212ENST00000480836 LRIG2O94898 1065 aa13.53□□□□□ -0.24
PTPN7-212ENST00000480836 CSF2P04141 144 aa13.53□□□□□ -0.24
PTPN7-212ENST00000480836 MMP8P22894 467 aa13.53□□□□□ -0.24
PTPN7-212ENST00000480836 NEK3P51956 506 aa13.53□□□□□ -0.24
PTPN7-212ENST00000480836 HDAC4P56524 1084 aa13.53□□□□□ -0.24
PTPN7-212ENST00000480836 BPIFB4P59827 614 aa13.53□□□□□ -0.24
PTPN7-212ENST00000480836 DAB2P98082 770 aa13.53□□□□□ -0.24
PTPN7-212ENST00000480836 E2F1Q01094 437 aa13.53□□□□□ -0.24
PTPN7-212ENST00000480836 MTA1Q13330 715 aa13.53□□□□□ -0.24
PTPN7-212ENST00000480836 TBC1D25Q3MII6 688 aa13.53□□□□□ -0.24
PTPN7-212ENST00000480836 KCTD16Q68DU8 428 aa13.53□□□□□ -0.24
PTPN7-212ENST00000480836 CRTC1Q6UUV9 634 aa13.53□□□□□ -0.24
PTPN7-212ENST00000480836 PCDH20Q8N6Y1 951 aaKnown RBP13.53□□□□□ -0.24
PTPN7-212ENST00000480836 ZNF548Q8NEK5 533 aaPredicted RBP13.53□□□□□ -0.24
PTPN7-212ENST00000480836 BAP1Q92560 729 aa13.53□□□□□ -0.24
PTPN7-212ENST00000480836 CENPIQ92674 756 aaPredicted RBP13.53□□□□□ -0.24
PTPN7-212ENST00000480836 CENPTQ96BT3 561 aa13.53□□□□□ -0.24
PTPN7-212ENST00000480836 PRR11Q96HE9 360 aaPredicted RBP13.53□□□□□ -0.24
PTPN7-212ENST00000480836 HIC2Q96JB3 615 aa13.53□□□□□ -0.24
PTPN7-212ENST00000480836 FCRL3Q96P31 734 aaPredicted RBP13.53□□□□□ -0.24
PTPN7-212ENST00000480836 ZDHHC6Q9H6R6 413 aa13.53□□□□□ -0.24
PTPN7-212ENST00000480836 MBNL1Q9NR56 388 aaKnown RBP13.53□□□□□ -0.24
PTPN7-212ENST00000480836 PPARGC1AQ9UBK2 798 aaKnown RBP13.53□□□□□ -0.24
PTPN7-212ENST00000480836 FARP1Q9Y4F1 1045 aaPredicted RBP13.53□□□□□ -0.24
PTPN7-212ENST00000480836 C2CD4BA6NLJ0 364 aa13.52□□□□□ -0.25
PTPN7-212ENST00000480836 AREL1O15033 823 aa13.52□□□□□ -0.25
PTPN7-212ENST00000480836 INSIG1O15503 277 aa13.52□□□□□ -0.25
PTPN7-212ENST00000480836 CELA2BP08218 269 aaPredicted RBP13.52□□□□□ -0.25
PTPN7-212ENST00000480836 UNGP13051 313 aaPredicted RBP13.52□□□□□ -0.25
PTPN7-212ENST00000480836 NME1P15531 152 aaKnown RBP13.52□□□□□ -0.25
PTPN7-212ENST00000480836 RFC1P35251 1148 aaPredicted RBP13.52□□□□□ -0.25
PTPN7-212ENST00000480836 SNX16P57768 344 aa13.52□□□□□ -0.25
PTPN7-212ENST00000480836 PFN3P60673 137 aa13.52□□□□□ -0.25
PTPN7-212ENST00000480836 RPS21P63220 83 aaKnown RBP13.52□□□□□ -0.25
PTPN7-212ENST00000480836 SLC20A2Q08357 652 aa13.52□□□□□ -0.25
PTPN7-212ENST00000480836 C1orf61Q13536 156 aa13.52□□□□□ -0.25
PTPN7-212ENST00000480836 CDKN3Q16667 212 aa13.52□□□□□ -0.25
PTPN7-212ENST00000480836 TPD52L1Q16890 204 aaPredicted RBP13.52□□□□□ -0.25
PTPN7-212ENST00000480836 TCP11X2Q5H9J9 407 aa13.52□□□□□ -0.25
PTPN7-212ENST00000480836 PERM1Q5SV97 790 aa13.52□□□□□ -0.25
PTPN7-212ENST00000480836 SMYD5Q6GMV2 418 aa13.52□□□□□ -0.25
PTPN7-212ENST00000480836 RETSATQ6NUM9 610 aa13.52□□□□□ -0.25
PTPN7-212ENST00000480836 GUSBP11Q6P575 273 aa13.52□□□□□ -0.25
PTPN7-212ENST00000480836 ZNF783Q6ZMS7 281 aa13.52□□□□□ -0.25
PTPN7-212ENST00000480836 ARCQ7LC44 396 aa13.52□□□□□ -0.25
PTPN7-212ENST00000480836 PTAR1Q7Z6K3 402 aaPredicted RBP13.52□□□□□ -0.25
PTPN7-212ENST00000480836 FAM181AQ8N9Y4 354 aa13.52□□□□□ -0.25
PTPN7-212ENST00000480836 SLC39A7Q92504 469 aa13.52□□□□□ -0.25
PTPN7-212ENST00000480836 FEM1CQ96JP0 617 aa13.52□□□□□ -0.25
PTPN7-212ENST00000480836 C11orf70Q9BRQ4 267 aa13.52□□□□□ -0.25
PTPN7-212ENST00000480836 CEP44Q9C0F1 390 aa13.52□□□□□ -0.25
PTPN7-212ENST00000480836 CLPBQ9H078 707 aa13.52□□□□□ -0.25
PTPN7-212ENST00000480836 VPS16Q9H269 839 aa13.52□□□□□ -0.25
PTPN7-212ENST00000480836 DYRK4Q9NR20 520 aa13.52□□□□□ -0.25
PTPN7-212ENST00000480836 NLGN3Q9NZ94 848 aa13.52□□□□□ -0.25
PTPN7-212ENST00000480836 TCRBV5S1A1TA0A578 114 aa13.51□□□□□ -0.25
PTPN7-212ENST00000480836 A6NNZ2 444 aa13.51□□□□□ -0.25
PTPN7-212ENST00000480836 ATXN7O15265 892 aaPredicted RBP13.51□□□□□ -0.25
PTPN7-212ENST00000480836 AP1G1O43747 822 aa13.51□□□□□ -0.25
PTPN7-212ENST00000480836 MMP20O60882 483 aa13.51□□□□□ -0.25
PTPN7-212ENST00000480836 USP12O75317 370 aa13.51□□□□□ -0.25
PTPN7-212ENST00000480836 CSO75390 466 aaKnown RBP13.51□□□□□ -0.25
PTPN7-212ENST00000480836 UGT2B4P06133 528 aa13.51□□□□□ -0.25
PTPN7-212ENST00000480836 ERCC5P28715 1186 aaPredicted RBP13.51□□□□□ -0.25
PTPN7-212ENST00000480836 JAM2P57087 298 aa13.51□□□□□ -0.25
PTPN7-212ENST00000480836 NRG1Q02297 640 aaPredicted RBP13.51□□□□□ -0.25
PTPN7-212ENST00000480836 PDE1CQ14123 709 aaPredicted RBP13.51□□□□□ -0.25
PTPN7-212ENST00000480836 DEFB133Q30KQ1 61 aa13.51□□□□□ -0.25
PTPN7-212ENST00000480836 MYLK3Q32MK0 819 aa13.51□□□□□ -0.25
PTPN7-212ENST00000480836 KYAT3Q6YP21 454 aaKnown RBP13.51□□□□□ -0.25
PTPN7-212ENST00000480836 IFT43Q96FT9 208 aa13.51□□□□□ -0.25
PTPN7-212ENST00000480836 CCDC114Q96M63 670 aa13.51□□□□□ -0.25
PTPN7-212ENST00000480836 KLHL32Q96NJ5 620 aa13.51□□□□□ -0.25
PTPN7-212ENST00000480836 LENG8Q96PV6 779 aaPredicted RBP13.51□□□□□ -0.25
PTPN7-212ENST00000480836 UBL7Q96S82 380 aaPredicted RBP13.51□□□□□ -0.25
PTPN7-212ENST00000480836 CPNE5Q9HCH3 593 aa13.51□□□□□ -0.25
PTPN7-212ENST00000480836 NLRC4Q9NPP4 1024 aa13.51□□□□□ -0.25
PTPN7-212ENST00000480836 ASCL3Q9NQ33 180 aa13.51□□□□□ -0.25
PTPN7-212ENST00000480836 TMEM248Q9NWD8 314 aa13.51□□□□□ -0.25
PTPN7-212ENST00000480836 KRIT1O00522 736 aa13.5□□□□□ -0.25
PTPN7-212ENST00000480836 LSM8O95777 96 aaKnown RBP13.5□□□□□ -0.25
PTPN7-212ENST00000480836 PLEKP08567 350 aaPredicted RBP13.5□□□□□ -0.25
PTPN7-212ENST00000480836 TIMP2P16035 220 aa13.5□□□□□ -0.25
PTPN7-212ENST00000480836 RHOQP17081 205 aa13.5□□□□□ -0.25
PTPN7-212ENST00000480836 IGFALSP35858 605 aa13.5□□□□□ -0.25
PTPN7-212ENST00000480836 RECQLP46063 649 aaPredicted RBP13.5□□□□□ -0.25
PTPN7-212ENST00000480836 POLR2FP61218 127 aaKnown RBP13.5□□□□□ -0.25
PTPN7-212ENST00000480836 CDR2Q01850 454 aa13.5□□□□□ -0.25
PTPN7-212ENST00000480836 CYTH1Q15438 398 aa13.5□□□□□ -0.25
PTPN7-212ENST00000480836 KIF26BQ2KJY2 2108 aa13.5□□□□□ -0.25
PTPN7-212ENST00000480836 ZNF805Q5CZA5 627 aa13.5□□□□□ -0.25
PTPN7-212ENST00000480836 KIAA1161Q6NSJ0 714 aa13.5□□□□□ -0.25
PTPN7-212ENST00000480836 RWDD4Q6NW29 188 aaKnown RBP13.5□□□□□ -0.25
PTPN7-212ENST00000480836 WDR59Q6PJI9 974 aa13.5□□□□□ -0.25
PTPN7-212ENST00000480836 PLPP6Q8IY26 295 aa13.5□□□□□ -0.25
PTPN7-212ENST00000480836 RYBPQ8N488 228 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms