RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 ZNF542PQ5EBM4 170 aa15.51■□□□□ 0.07
LIMS3-203ENST00000480744 TMC6Q7Z403 805 aa15.51■□□□□ 0.07
LIMS3-203ENST00000480744 NLRP14Q86W24 1093 aa15.51■□□□□ 0.07
LIMS3-203ENST00000480744 SLC22A18ASQ8N1D0 253 aa15.51■□□□□ 0.07
LIMS3-203ENST00000480744 LRIG1Q96JA1 1093 aa15.51■□□□□ 0.07
LIMS3-203ENST00000480744 MAGEH1Q9H213 219 aa15.51■□□□□ 0.07
LIMS3-203ENST00000480744 TMEM248Q9NWD8 314 aa15.51■□□□□ 0.07
LIMS3-203ENST00000480744 DNAJC28Q9NX36 388 aa15.51■□□□□ 0.07
LIMS3-203ENST00000480744 LAMA5O15230 3695 aa15.5■□□□□ 0.07
LIMS3-203ENST00000480744 C16orf96A6NNT2 1141 aa15.5■□□□□ 0.07
LIMS3-203ENST00000480744 LGALS16A8MUM7 142 aa15.5■□□□□ 0.07
LIMS3-203ENST00000480744 PIAS2O75928 621 aa15.5■□□□□ 0.07
LIMS3-203ENST00000480744 UGT2B4P06133 528 aa15.5■□□□□ 0.07
LIMS3-203ENST00000480744 CDK11BP21127 795 aaKnown RBP15.5■□□□□ 0.07
LIMS3-203ENST00000480744 ACP1P24666 158 aa15.5■□□□□ 0.07
LIMS3-203ENST00000480744 SNRPD1P62314 119 aaKnown RBP15.5■□□□□ 0.07
LIMS3-203ENST00000480744 MYL5Q02045 173 aa15.5■□□□□ 0.07
LIMS3-203ENST00000480744 SEMG2Q02383 582 aa15.5■□□□□ 0.07
LIMS3-203ENST00000480744 SGCGQ13326 291 aa15.5■□□□□ 0.07
LIMS3-203ENST00000480744 FGL2Q14314 439 aa15.5■□□□□ 0.07
LIMS3-203ENST00000480744 STX1AQ16623 288 aa15.5■□□□□ 0.07
LIMS3-203ENST00000480744 ATXN7L2Q5T6C5 722 aaPredicted RBP15.5■□□□□ 0.07
LIMS3-203ENST00000480744 DNAJC24Q6P3W2 148 aa15.5■□□□□ 0.07
LIMS3-203ENST00000480744 SCYL2Q6P3W7 929 aa15.5■□□□□ 0.07
LIMS3-203ENST00000480744 WDR59Q6PJI9 974 aa15.5■□□□□ 0.07
LIMS3-203ENST00000480744 ABI3BPQ7Z7G0 1075 aa15.5■□□□□ 0.07
LIMS3-203ENST00000480744 SLFN11Q7Z7L1 901 aa15.5■□□□□ 0.07
LIMS3-203ENST00000480744 PYROXD2Q8N2H3 581 aa15.5■□□□□ 0.07
LIMS3-203ENST00000480744 OR2AP1Q8NGE2 309 aa15.5■□□□□ 0.07
LIMS3-203ENST00000480744 OR4C6Q8NH72 309 aa15.5■□□□□ 0.07
LIMS3-203ENST00000480744 CENPIQ92674 756 aaPredicted RBP15.5■□□□□ 0.07
LIMS3-203ENST00000480744 ISG20Q96AZ6 181 aaKnown RBP15.5■□□□□ 0.07
LIMS3-203ENST00000480744 SCUBE2Q9NQ36 999 aa15.5■□□□□ 0.07
LIMS3-203ENST00000480744 ANO10Q9NW15 660 aa15.5■□□□□ 0.07
LIMS3-203ENST00000480744 LIMA1Q9UHB6 759 aaKnown RBP15.5■□□□□ 0.07
LIMS3-203ENST00000480744 IPO11Q9UI26 975 aaKnown RBP15.5■□□□□ 0.07
LIMS3-203ENST00000480744 NEU3Q9UQ49 428 aa15.5■□□□□ 0.07
LIMS3-203ENST00000480744 ITM2BQ9Y287 266 aa15.5■□□□□ 0.07
LIMS3-203ENST00000480744 HS3ST3A1Q9Y663 406 aa15.5■□□□□ 0.07
LIMS3-203ENST00000480744 ANKRD62A6NC57 917 aa15.49■□□□□ 0.07
LIMS3-203ENST00000480744 POM121BA6NF01 834 aa15.49■□□□□ 0.07
LIMS3-203ENST00000480744 IGLON5A6NGN9 336 aa15.49■□□□□ 0.07
LIMS3-203ENST00000480744 RAD51BO15315 384 aa15.49■□□□□ 0.07
LIMS3-203ENST00000480744 CCP110O43303 1012 aa15.49■□□□□ 0.07
LIMS3-203ENST00000480744 BUB1O43683 1085 aa15.49■□□□□ 0.07
LIMS3-203ENST00000480744 AP1G1O43747 822 aa15.49■□□□□ 0.07
LIMS3-203ENST00000480744 GSRP00390 522 aa15.49■□□□□ 0.07
LIMS3-203ENST00000480744 ALPPL2P10696 532 aa15.49■□□□□ 0.07
LIMS3-203ENST00000480744 ABL2P42684 1182 aa15.49■□□□□ 0.07
LIMS3-203ENST00000480744 INSM1Q01101 510 aaPredicted RBP15.49■□□□□ 0.07
LIMS3-203ENST00000480744 COL9A2Q14055 689 aaPredicted RBP15.49■□□□□ 0.07
LIMS3-203ENST00000480744 ZNF805Q5CZA5 627 aa15.49■□□□□ 0.07
LIMS3-203ENST00000480744 EFHC2Q5JST6 749 aa15.49■□□□□ 0.07
LIMS3-203ENST00000480744 KYAT3Q6YP21 454 aaKnown RBP15.49■□□□□ 0.07
LIMS3-203ENST00000480744 RBM43Q6ZSC3 357 aaKnown RBP15.49■□□□□ 0.07
LIMS3-203ENST00000480744 PHF13Q86YI8 300 aaPredicted RBP15.49■□□□□ 0.07
LIMS3-203ENST00000480744 NETO2Q8NC67 525 aa15.49■□□□□ 0.07
LIMS3-203ENST00000480744 C3orf20Q8ND61 904 aa15.49■□□□□ 0.07
LIMS3-203ENST00000480744 FAM174AQ8TBP5 190 aa15.49■□□□□ 0.07
LIMS3-203ENST00000480744 NTAN1Q96AB6 310 aa15.49■□□□□ 0.07
LIMS3-203ENST00000480744 BMFQ96LC9 184 aa15.49■□□□□ 0.07
LIMS3-203ENST00000480744 KLHL32Q96NJ5 620 aa15.49■□□□□ 0.07
LIMS3-203ENST00000480744 AGPAT1Q99943 283 aa15.49■□□□□ 0.07
LIMS3-203ENST00000480744 RETREG1Q9H6L5 497 aa15.49■□□□□ 0.07
LIMS3-203ENST00000480744 GGT7Q9UJ14 662 aa15.49■□□□□ 0.07
LIMS3-203ENST00000480744 CLCA2Q9UQC9 943 aa15.49■□□□□ 0.07
LIMS3-203ENST00000480744 LRRK1Q38SD2 2015 aa15.49■□□□□ 0.07
LIMS3-203ENST00000480744 ANKRD36A6QL64 1941 aa15.49■□□□□ 0.07
LIMS3-203ENST00000480744 ATRXP46100 2492 aa15.49■□□□□ 0.07
LIMS3-203ENST00000480744 SHROOM3Q8TF72 1996 aa15.48■□□□□ 0.07
LIMS3-203ENST00000480744 CELSR3Q9NYQ7 3312 aa15.48■□□□□ 0.07
LIMS3-203ENST00000480744 SIGLEC16A6NMB1 481 aa15.48■□□□□ 0.07
LIMS3-203ENST00000480744 FPGTO14772 594 aa15.48■□□□□ 0.07
LIMS3-203ENST00000480744 TSPAN6O43657 245 aa15.48■□□□□ 0.07
LIMS3-203ENST00000480744 KDELR3O43731 214 aa15.48■□□□□ 0.07
LIMS3-203ENST00000480744 CREB3O43889 395 aa15.48■□□□□ 0.07
LIMS3-203ENST00000480744 POP4O95707 220 aaKnown RBP15.48■□□□□ 0.07
LIMS3-203ENST00000480744 MYF5P13349 255 aa15.48■□□□□ 0.07
LIMS3-203ENST00000480744 EPHB2P29323 1055 aa15.48■□□□□ 0.07
LIMS3-203ENST00000480744 GSCP56915 257 aaPredicted RBP15.48■□□□□ 0.07
LIMS3-203ENST00000480744 E2F1Q01094 437 aa15.48■□□□□ 0.07
LIMS3-203ENST00000480744 MYLK3Q32MK0 819 aa15.48■□□□□ 0.07
LIMS3-203ENST00000480744 LRRC73Q5JTD7 316 aa15.48■□□□□ 0.07
LIMS3-203ENST00000480744 KDM7AQ6ZMT4 941 aa15.48■□□□□ 0.07
LIMS3-203ENST00000480744 MON1BQ7L1V2 547 aa15.48■□□□□ 0.07
LIMS3-203ENST00000480744 DCP2Q8IU60 420 aaKnown RBP15.48■□□□□ 0.07
LIMS3-203ENST00000480744 PLPP6Q8IY26 295 aa15.48■□□□□ 0.07
LIMS3-203ENST00000480744 RAB7BQ96AH8 199 aa15.48■□□□□ 0.07
LIMS3-203ENST00000480744 GDAP1L1Q96MZ0 367 aa15.48■□□□□ 0.07
LIMS3-203ENST00000480744 MCEEQ96PE7 176 aa15.48■□□□□ 0.07
LIMS3-203ENST00000480744 NLGN3Q9NZ94 848 aa15.48■□□□□ 0.07
LIMS3-203ENST00000480744 CXorf51AA0A1B0GTR3 108 aa15.47■□□□□ 0.07
LIMS3-203ENST00000480744 NEMP2A6NFY4 417 aa15.47■□□□□ 0.07
LIMS3-203ENST00000480744 ZSCAN5CA6NGD5 496 aaPredicted RBP15.47■□□□□ 0.07
LIMS3-203ENST00000480744 H3BM21 787 aa15.47■□□□□ 0.07
LIMS3-203ENST00000480744 NEBLO76041 1014 aa15.47■□□□□ 0.07
LIMS3-203ENST00000480744 TMCC1O94876 653 aa15.47■□□□□ 0.07
LIMS3-203ENST00000480744 ABCG1P45844 678 aa15.47■□□□□ 0.07
LIMS3-203ENST00000480744 RABIFP47224 123 aa15.47■□□□□ 0.07
LIMS3-203ENST00000480744 RHOAP61586 193 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms