RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 PCDHB9Q9Y5E1 797 aa23.82■■□□□ 1.4
C9orf3-215ENST00000478473 FADS3Q9Y5Q0 445 aa23.82■■□□□ 1.4
C9orf3-215ENST00000478473 A0A1W2PQU0 124 aa23.81■■□□□ 1.4
C9orf3-215ENST00000478473 KCNK3O14649 394 aa23.81■■□□□ 1.4
C9orf3-215ENST00000478473 TMCC1O94876 653 aa23.81■■□□□ 1.4
C9orf3-215ENST00000478473 ADRB3P13945 408 aa23.81■■□□□ 1.4
C9orf3-215ENST00000478473 GRK6P43250 576 aa23.81■■□□□ 1.4
C9orf3-215ENST00000478473 TPI1P60174 286 aa23.81■■□□□ 1.4
C9orf3-215ENST00000478473 CA9Q16790 459 aa23.81■■□□□ 1.4
C9orf3-215ENST00000478473 MYLK3Q32MK0 819 aa23.81■■□□□ 1.4
C9orf3-215ENST00000478473 AFMIDQ63HM1 303 aa23.81■■□□□ 1.4
C9orf3-215ENST00000478473 VPS36Q86VN1 386 aa23.81■■□□□ 1.4
C9orf3-215ENST00000478473 OXR1Q8N573 874 aa23.81■■□□□ 1.4
C9orf3-215ENST00000478473 ADAMTS14Q8WXS8 1223 aa23.81■■□□□ 1.4
C9orf3-215ENST00000478473 TM6SF2Q9BZW4 377 aa23.81■■□□□ 1.4
C9orf3-215ENST00000478473 PDFQ9HBH1 243 aa23.81■■□□□ 1.4
C9orf3-215ENST00000478473 NENFQ9UMX5 172 aa23.81■■□□□ 1.4
C9orf3-215ENST00000478473 ZFR2Q9UPR6 939 aaKnown RBP23.81■■□□□ 1.4
C9orf3-215ENST00000478473 NEUROG3Q9Y4Z2 214 aa23.81■■□□□ 1.4
C9orf3-215ENST00000478473 BUB1O43683 1085 aa23.8■■□□□ 1.4
C9orf3-215ENST00000478473 PRPSAP2O60256 369 aa23.8■■□□□ 1.4
C9orf3-215ENST00000478473 MAT2AP31153 395 aaKnown RBP23.8■■□□□ 1.4
C9orf3-215ENST00000478473 DNA2P51530 1060 aa23.8■■□□□ 1.4
C9orf3-215ENST00000478473 TDRD12Q587J7 1177 aaKnown RBP23.8■■□□□ 1.4
C9orf3-215ENST00000478473 ZNF805Q5CZA5 627 aa23.8■■□□□ 1.4
C9orf3-215ENST00000478473 PARS2Q7L3T8 475 aaKnown RBP23.8■■□□□ 1.4
C9orf3-215ENST00000478473 SPATS2Q86XZ4 545 aaKnown RBP23.8■■□□□ 1.4
C9orf3-215ENST00000478473 NIPA2Q8N8Q9 360 aa23.8■■□□□ 1.4
C9orf3-215ENST00000478473 FAM174AQ8TBP5 190 aa23.8■■□□□ 1.4
C9orf3-215ENST00000478473 RHBDD1Q8TEB9 315 aa23.8■■□□□ 1.4
C9orf3-215ENST00000478473 SAP25Q8TEE9 199 aa23.8■■□□□ 1.4
C9orf3-215ENST00000478473 SETD7Q8WTS6 366 aaKnown RBP23.8■■□□□ 1.4
C9orf3-215ENST00000478473 SCNM1Q9BWG6 230 aa23.8■■□□□ 1.4
C9orf3-215ENST00000478473 GPATCH2LQ9NWQ4 482 aa23.8■■□□□ 1.4
C9orf3-215ENST00000478473 TOR4AQ9NXH8 423 aa23.8■■□□□ 1.4
C9orf3-215ENST00000478473 BTBD3Q9Y2F9 522 aa23.8■■□□□ 1.4
C9orf3-215ENST00000478473 DOCK9Q9BZ29 2069 aa23.8■■□□□ 1.4
C9orf3-215ENST00000478473 MAP1BP46821 2468 aaKnown RBP23.79■■□□□ 1.4
C9orf3-215ENST00000478473 SPEGQ15772 3267 aa23.79■■□□□ 1.4
C9orf3-215ENST00000478473 A0A087X0T9 212 aa23.79■■□□□ 1.4
C9orf3-215ENST00000478473 TOP3BO95985 862 aaKnown RBP23.79■■□□□ 1.4
C9orf3-215ENST00000478473 FTH1P19P0C7X4 201 aa23.79■■□□□ 1.4
C9orf3-215ENST00000478473 FAM228BP0C875 321 aa23.79■■□□□ 1.4
C9orf3-215ENST00000478473 STAT4Q14765 748 aa23.79■■□□□ 1.4
C9orf3-215ENST00000478473 KIAA1161Q6NSJ0 714 aa23.79■■□□□ 1.4
C9orf3-215ENST00000478473 RFX8Q6ZV50 586 aa23.79■■□□□ 1.4
C9orf3-215ENST00000478473 ASB12Q8WXK4 309 aa23.79■■□□□ 1.4
C9orf3-215ENST00000478473 GDAP1L1Q96MZ0 367 aa23.79■■□□□ 1.4
C9orf3-215ENST00000478473 KCTD15Q96SI1 283 aaPredicted RBP23.79■■□□□ 1.4
C9orf3-215ENST00000478473 CPEB1Q9BZB8 566 aaKnown RBP23.79■■□□□ 1.4
C9orf3-215ENST00000478473 XPO4Q9C0E2 1151 aaKnown RBP23.79■■□□□ 1.4
C9orf3-215ENST00000478473 DHX35Q9H5Z1 703 aaKnown RBP23.79■■□□□ 1.4
C9orf3-215ENST00000478473 TP53BP1Q12888 1972 aaPredicted RBP23.79■■□□□ 1.4
C9orf3-215ENST00000478473 COL5A1P20908 1838 aaPredicted RBP23.79■■□□□ 1.4
C9orf3-215ENST00000478473 FRYQ5TBA9 3013 aa23.78■■□□□ 1.4
C9orf3-215ENST00000478473 EEF2KO00418 725 aaKnown RBP23.78■■□□□ 1.4
C9orf3-215ENST00000478473 AREL1O15033 823 aa23.78■■□□□ 1.4
C9orf3-215ENST00000478473 PRAMEF11O60813 436 aa23.78■■□□□ 1.4
C9orf3-215ENST00000478473 CYP1A2P05177 515 aa23.78■■□□□ 1.4
C9orf3-215ENST00000478473 TPM3P06753 285 aa23.78■■□□□ 1.4
C9orf3-215ENST00000478473 HNRNPA2B1P22626 353 aaKnown RBP23.78■■□□□ 1.4
C9orf3-215ENST00000478473 RPS21P63220 83 aaKnown RBP23.78■■□□□ 1.4
C9orf3-215ENST00000478473 PIGHQ14442 188 aaPredicted RBP23.78■■□□□ 1.4
C9orf3-215ENST00000478473 DPYSL2Q16555 572 aa23.78■■□□□ 1.4
C9orf3-215ENST00000478473 INAVAQ3KP66 663 aa23.78■■□□□ 1.4
C9orf3-215ENST00000478473 BOLA3Q53S33 107 aa23.78■■□□□ 1.4
C9orf3-215ENST00000478473 FBXL19Q6PCT2 694 aa23.78■■□□□ 1.4
C9orf3-215ENST00000478473 KANSL1Q7Z3B3 1105 aa23.78■■□□□ 1.4
C9orf3-215ENST00000478473 ABI3BPQ7Z7G0 1075 aa23.78■■□□□ 1.4
C9orf3-215ENST00000478473 FEM1CQ96JP0 617 aa23.78■■□□□ 1.4
C9orf3-215ENST00000478473 ZDHHC6Q9H6R6 413 aa23.78■■□□□ 1.4
C9orf3-215ENST00000478473 GPR27Q9NS67 375 aa23.78■■□□□ 1.4
C9orf3-215ENST00000478473 DKK3Q9UBP4 350 aa23.78■■□□□ 1.4
C9orf3-215ENST00000478473 PCSK1NQ9UHG2 260 aa23.78■■□□□ 1.4
C9orf3-215ENST00000478473 APOBEC2Q9Y235 224 aaKnown RBP23.78■■□□□ 1.4
C9orf3-215ENST00000478473 MSRB2Q9Y3D2 182 aa23.78■■□□□ 1.4
C9orf3-215ENST00000478473 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.78■■□□□ 1.4
C9orf3-215ENST00000478473 KMT2BQ9UMN6 2715 aaPredicted RBP23.77■■□□□ 1.4
C9orf3-215ENST00000478473 C16orf96A6NNT2 1141 aa23.77■■□□□ 1.4
C9orf3-215ENST00000478473 TSPAN6O43657 245 aa23.77■■□□□ 1.4
C9orf3-215ENST00000478473 HYAL3O43820 417 aaPredicted RBP23.77■■□□□ 1.4
C9orf3-215ENST00000478473 ERCC2P18074 760 aa23.77■■□□□ 1.4
C9orf3-215ENST00000478473 EPHA8P29322 1005 aaPredicted RBP23.77■■□□□ 1.4
C9orf3-215ENST00000478473 ARRB1P49407 418 aaPredicted RBP23.77■■□□□ 1.4
C9orf3-215ENST00000478473 CYTH1Q15438 398 aa23.77■■□□□ 1.4
C9orf3-215ENST00000478473 SLCO6A1Q86UG4 719 aa23.77■■□□□ 1.4
C9orf3-215ENST00000478473 ARHGAP12Q8IWW6 846 aa23.77■■□□□ 1.4
C9orf3-215ENST00000478473 HCAR2Q8TDS4 363 aa23.77■■□□□ 1.4
C9orf3-215ENST00000478473 GATA6Q92908 595 aa23.77■■□□□ 1.4
C9orf3-215ENST00000478473 C1QTNF2Q9BXJ5 285 aa23.77■■□□□ 1.4
C9orf3-215ENST00000478473 SLC39A8Q9C0K1 460 aa23.77■■□□□ 1.4
C9orf3-215ENST00000478473 THAP2Q9H0W7 228 aa23.77■■□□□ 1.4
C9orf3-215ENST00000478473 MYO1AQ9UBC5 1043 aa23.77■■□□□ 1.4
C9orf3-215ENST00000478473 LHX3Q9UBR4 397 aa23.77■■□□□ 1.4
C9orf3-215ENST00000478473 HS3ST3A1Q9Y663 406 aa23.77■■□□□ 1.4
C9orf3-215ENST00000478473 KRIT1O00522 736 aa23.76■■□□□ 1.39
C9orf3-215ENST00000478473 SPINT1O43278 529 aa23.76■■□□□ 1.39
C9orf3-215ENST00000478473 PCDH8O95206 1070 aa23.76■■□□□ 1.39
C9orf3-215ENST00000478473 IGSF6O95976 241 aa23.76■■□□□ 1.39
C9orf3-215ENST00000478473 IL1R2P27930 398 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms