RNA–Protein interactions for RNA: ENST00000478460.5

IFT80-216, Transcript of intraflagellar transport 80, human

TSL 4

Gene IFT80, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IFT80-216	ENST00000478460	GRID2IP	A4D2P6	1211 aa		4.48	□□□□□ -1.69
IFT80-216	ENST00000478460	USP17L23	D6RBM5	183 aa		4.48	□□□□□ -1.69
IFT80-216	ENST00000478460	MSI1	O43347	362 aa	Known RBP	4.48	□□□□□ -1.69
IFT80-216	ENST00000478460	PAGE4	O60829	102 aa		4.48	□□□□□ -1.69
IFT80-216	ENST00000478460	SLC2A4	P14672	509 aa		4.48	□□□□□ -1.69
IFT80-216	ENST00000478460	PROZ	P22891	400 aa		4.48	□□□□□ -1.69
IFT80-216	ENST00000478460	GCH1	P30793	250 aa		4.48	□□□□□ -1.69
IFT80-216	ENST00000478460	EIF2D	P41214	584 aa	Known RBP	4.48	□□□□□ -1.69
IFT80-216	ENST00000478460	SOX2	P48431	317 aa		4.48	□□□□□ -1.69
IFT80-216	ENST00000478460	CDH8	P55286	799 aa		4.48	□□□□□ -1.69
IFT80-216	ENST00000478460	ZBTB16	Q05516	673 aa		4.48	□□□□□ -1.69
IFT80-216	ENST00000478460	NIPAL4	Q0D2K0	466 aa		4.48	□□□□□ -1.69
IFT80-216	ENST00000478460	CSTF3	Q12996	717 aa	Known RBP	4.48	□□□□□ -1.69
IFT80-216	ENST00000478460	MTA1	Q13330	715 aa		4.48	□□□□□ -1.69
IFT80-216	ENST00000478460	GALNT3	Q14435	633 aa		4.48	□□□□□ -1.69
IFT80-216	ENST00000478460	CERKL	Q49MI3	558 aa	Predicted RBP	4.48	□□□□□ -1.69
IFT80-216	ENST00000478460	SPECC1	Q5M775	1068 aa		4.48	□□□□□ -1.69
IFT80-216	ENST00000478460	TSTD2	Q5T7W7	516 aa		4.48	□□□□□ -1.69
IFT80-216	ENST00000478460	CPLX2	Q6PUV4	134 aa	Known RBP	4.48	□□□□□ -1.69
IFT80-216	ENST00000478460	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	4.48	□□□□□ -1.69
IFT80-216	ENST00000478460	GPAT4	Q86UL3	456 aa		4.48	□□□□□ -1.69
IFT80-216	ENST00000478460	VRK3	Q8IV63	474 aa		4.48	□□□□□ -1.69
IFT80-216	ENST00000478460	CCDC191	Q8NCU4	936 aa		4.48	□□□□□ -1.69
IFT80-216	ENST00000478460	FAR1	Q8WVX9	515 aa		4.48	□□□□□ -1.69
IFT80-216	ENST00000478460	GTF3C6	Q969F1	213 aa		4.48	□□□□□ -1.69
IFT80-216	ENST00000478460	PGAM5	Q96HS1	289 aa		4.48	□□□□□ -1.69
IFT80-216	ENST00000478460	AGAP2	Q99490	1192 aa		4.48	□□□□□ -1.69
IFT80-216	ENST00000478460	GATA5	Q9BWX5	397 aa	Predicted RBP	4.48	□□□□□ -1.69
IFT80-216	ENST00000478460	HEMGN	Q9BXL5	484 aa		4.48	□□□□□ -1.69
IFT80-216	ENST00000478460	RRP7BP	Q9NSQ0	103 aa		4.48	□□□□□ -1.69
IFT80-216	ENST00000478460	SH3BP4	Q9P0V3	963 aa		4.48	□□□□□ -1.69
IFT80-216	ENST00000478460	DLGAP2	Q9P1A6	1054 aa		4.48	□□□□□ -1.69
IFT80-216	ENST00000478460	NLK	Q9UBE8	527 aa		4.48	□□□□□ -1.69
IFT80-216	ENST00000478460	CHORDC1	Q9UHD1	332 aa	Predicted RBP	4.48	□□□□□ -1.69
IFT80-216	ENST00000478460	FBXO4	Q9UKT5	387 aa		4.48	□□□□□ -1.69
IFT80-216	ENST00000478460	NOL7	Q9UMY1	257 aa	Known RBP	4.48	□□□□□ -1.69
IFT80-216	ENST00000478460	DMRT1	Q9Y5R6	373 aa		4.48	□□□□□ -1.69
IFT80-216	ENST00000478460	CAPN7	Q9Y6W3	813 aa		4.48	□□□□□ -1.69
IFT80-216	ENST00000478460	SETD1B	Q9UPS6	1966 aa	Known RBP	4.47	□□□□□ -1.69
IFT80-216	ENST00000478460		A0A1W2PQ09	198 aa		4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	SCAMP1	O15126	338 aa		4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	LIAS	O43766	372 aa		4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	ERAL1	O75616	437 aa	Known RBP	4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	GJB3	O75712	270 aa		4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	RNF8	O76064	485 aa		4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	IPO7	O95373	1038 aa	Known RBP	4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	NFATC1	O95644	943 aa		4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	DDAH2	O95865	285 aa		4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	GC	P02774	474 aa		4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	LCK	P06239	509 aa		4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	HEXA	P06865	529 aa		4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	ADRB2	P07550	413 aa		4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	PTPN2	P17706	415 aa		4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	IL11	P20809	199 aa		4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	SAT1	P21673	171 aa		4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	MCM3	P25205	808 aa		4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	GARS	P41250	739 aa	Known RBP	4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	ARSF	P54793	590 aa		4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	SIM1	P81133	766 aa	Predicted RBP	4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	LRMP	Q12912	555 aa		4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	PRPF4B	Q13523	1007 aa	Known RBP	4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	FRG1	Q14331	258 aa	Known RBP	4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	RAB41	Q5JT25	222 aa		4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	TXNDC8	Q6A555	127 aa		4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	HMBOX1	Q6NT76	420 aa		4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	RBM44	Q6ZP01	1051 aa	Known RBP	4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	MOB3C	Q70IA8	216 aa		4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	CHST9	Q7L1S5	443 aa		4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	TFAP2D	Q7Z6R9	452 aa		4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	IGFN1	Q86VF2	1251 aa		4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	TEX11	Q8IYF3	940 aa		4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	GDPD5	Q8WTR4	605 aa		4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	HDAC7	Q8WUI4	952 aa		4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	TMEM170A	Q8WVE7	144 aa		4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	IP6K1	Q92551	441 aa		4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	FCRL5	Q96RD9	977 aa		4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	TIMP4	Q99727	224 aa		4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	TEX12	Q9BXU0	123 aa		4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	KRTAP9-8	Q9BYQ0	159 aa		4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	SCPEP1	Q9HB40	452 aa		4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	SPATS2L	Q9NUQ6	558 aa	Known RBP	4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	SUCLA2	Q9P2R7	463 aa	Predicted RBP	4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	SLC17A6	Q9P2U8	582 aa		4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	MKLN1	Q9UL63	735 aa		4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	ADAM18	Q9Y3Q7	739 aa		4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	SESN1	Q9Y6P5	492 aa		4.47	□□□□□ -1.69
IFT80-216	ENST00000478460	UTY	O14607	1347 aa		4.46	□□□□□ -1.69
IFT80-216	ENST00000478460	TARSL2	A2RTX5	802 aa	Known RBP	4.46	□□□□□ -1.7
IFT80-216	ENST00000478460	TARM1	B6A8C7	271 aa		4.46	□□□□□ -1.7
IFT80-216	ENST00000478460	TAF4	O00268	1085 aa		4.46	□□□□□ -1.7
IFT80-216	ENST00000478460	RRH	O14718	337 aa		4.46	□□□□□ -1.7
IFT80-216	ENST00000478460	PPFIA2	O75334	1257 aa		4.46	□□□□□ -1.7
IFT80-216	ENST00000478460	SEC31A	O94979	1220 aa	Known RBP	4.46	□□□□□ -1.7
IFT80-216	ENST00000478460	OR2C1	O95371	312 aa		4.46	□□□□□ -1.7
IFT80-216	ENST00000478460	PGM3	O95394	542 aa		4.46	□□□□□ -1.7
IFT80-216	ENST00000478460	APOA4	P06727	396 aa		4.46	□□□□□ -1.7
IFT80-216	ENST00000478460	CD63	P08962	238 aa		4.46	□□□□□ -1.7
IFT80-216	ENST00000478460	HOXB5	P09067	269 aa		4.46	□□□□□ -1.7
IFT80-216	ENST00000478460	CLTB	P09497	229 aa		4.46	□□□□□ -1.7

Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms