RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 SLC25A23Q9BV35 468 aa14.36□□□□□ -0.11
NPHP4-208ENST00000478423 FAM126AQ9BYI3 521 aaPredicted RBP14.36□□□□□ -0.11
NPHP4-208ENST00000478423 CYLDQ9NQC7 956 aa14.36□□□□□ -0.11
NPHP4-208ENST00000478423 HPS4Q9NQG7 708 aa14.36□□□□□ -0.11
NPHP4-208ENST00000478423 MAN1C1Q9NR34 630 aa14.36□□□□□ -0.11
NPHP4-208ENST00000478423 IL1RAPL1Q9NZN1 696 aa14.36□□□□□ -0.11
NPHP4-208ENST00000478423 SCHIP1Q9P0W5 487 aaPredicted RBP14.36□□□□□ -0.11
NPHP4-208ENST00000478423 CHKBQ9Y259 395 aa14.36□□□□□ -0.11
NPHP4-208ENST00000478423 SH3BGRLO75368 114 aa14.36□□□□□ -0.11
NPHP4-208ENST00000478423 UNC5CO95185 931 aa14.36□□□□□ -0.11
NPHP4-208ENST00000478423 MLNP12872 115 aa14.36□□□□□ -0.11
NPHP4-208ENST00000478423 HLA-DPA1P20036 260 aa14.36□□□□□ -0.11
NPHP4-208ENST00000478423 PTGIRP43119 386 aa14.36□□□□□ -0.11
NPHP4-208ENST00000478423 SETMARQ53H47 684 aaPredicted RBP14.36□□□□□ -0.11
NPHP4-208ENST00000478423 FUT10Q6P4F1 479 aa14.36□□□□□ -0.11
NPHP4-208ENST00000478423 TAC4Q86UU9 113 aa14.36□□□□□ -0.11
NPHP4-208ENST00000478423 DIS3LQ8TF46 1054 aaKnown RBP14.36□□□□□ -0.11
NPHP4-208ENST00000478423 CLEC4CQ8WTT0 213 aa14.36□□□□□ -0.11
NPHP4-208ENST00000478423 CAB39LQ9H9S4 337 aa14.36□□□□□ -0.11
NPHP4-208ENST00000478423 WDR41Q9HAD4 459 aa14.36□□□□□ -0.11
NPHP4-208ENST00000478423 INPP4BO15327 924 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 CXCL14O95715 111 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 TPSB2P20231 275 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 GLUD2P49448 558 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 POU5F1Q01860 360 aaKnown RBP14.35□□□□□ -0.11
NPHP4-208ENST00000478423 MAP3K10Q02779 954 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 SGCGQ13326 291 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 TPSAB1Q15661 275 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 POM121L1PQ3SYA9 428 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 TIGD5Q53EQ6 642 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 LRRC8BQ6P9F7 803 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 ZNF786Q8N393 782 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 MCRS1Q96EZ8 462 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 CACNG4Q9UBN1 327 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 GON4LQ3T8J9 2241 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 HDAC3O15379 428 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 ZNF682O95780 498 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 TYMPP19971 482 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 DGKAP23743 735 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 L1CAMP32004 1257 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 HSPA13P48723 471 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 VARS2Q5ST30 1063 aaKnown RBP14.35□□□□□ -0.11
NPHP4-208ENST00000478423 FNBP1LQ5T0N5 605 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 RD3Q7Z3Z2 195 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 OR6K2Q8NGY2 324 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 NPLOC4Q8TAT6 608 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 SEPHS2Q99611 448 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 BBS2Q9BXC9 721 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 RHOJQ9H4E5 214 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 AGO3Q9H9G7 860 aaKnown RBP14.35□□□□□ -0.11
NPHP4-208ENST00000478423 CHRAC1Q9NRG0 131 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 EDF1O60869 148 aaKnown RBP14.35□□□□□ -0.11
NPHP4-208ENST00000478423 FAM155BO75949 473 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 CTPS1P17812 591 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 DAB2P98082 770 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 ZC3H12BQ5HYM0 836 aaKnown RBP14.35□□□□□ -0.11
NPHP4-208ENST00000478423 IL27RAQ6UWB1 636 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 CENPLQ8N0S6 344 aaPredicted RBP14.35□□□□□ -0.11
NPHP4-208ENST00000478423 MAB21L3Q8N8X9 362 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 TRPC4APQ8TEL6 797 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 RSPH1Q8WYR4 309 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 COPS7BQ9H9Q2 264 aaPredicted RBP14.35□□□□□ -0.11
NPHP4-208ENST00000478423 MIEF1Q9NQG6 463 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 VWA7Q9Y334 891 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 FOXO6A8MYZ6 492 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 H3BMM5 538 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 PSMD12O00232 456 aaPredicted RBP14.35□□□□□ -0.11
NPHP4-208ENST00000478423 HNRNPRO43390 633 aaKnown RBP14.35□□□□□ -0.11
NPHP4-208ENST00000478423 CATP04040 527 aaKnown RBP14.35□□□□□ -0.11
NPHP4-208ENST00000478423 PKNOX1P55347 436 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 FBXW4P57775 412 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 KPNB1Q14974 876 aaKnown RBP14.35□□□□□ -0.11
NPHP4-208ENST00000478423 EML3Q32P44 896 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 CYP2R1Q6VVX0 501 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 IRGQQ8WZA9 623 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 PLEKHA8Q96JA3 519 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 NSMCE2Q96MF7 247 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 TEKT2Q9UIF3 430 aa14.35□□□□□ -0.11
NPHP4-208ENST00000478423 TNPO3Q9Y5L0 923 aaKnown RBP14.35□□□□□ -0.11
NPHP4-208ENST00000478423 CLUHO75153 1309 aa14.34□□□□□ -0.11
NPHP4-208ENST00000478423 CLDN11O75508 207 aa14.34□□□□□ -0.11
NPHP4-208ENST00000478423 ALDH1A2O94788 518 aa14.34□□□□□ -0.11
NPHP4-208ENST00000478423 FSBPO95073 299 aa14.34□□□□□ -0.11
NPHP4-208ENST00000478423 C1RP00736 705 aa14.34□□□□□ -0.11
NPHP4-208ENST00000478423 ATP6V1B2P21281 511 aa14.34□□□□□ -0.11
NPHP4-208ENST00000478423 WARSP23381 471 aaKnown RBP14.34□□□□□ -0.11
NPHP4-208ENST00000478423 CNTN1Q12860 1018 aa14.34□□□□□ -0.11
NPHP4-208ENST00000478423 TP53BP2Q13625 1128 aa14.34□□□□□ -0.11
NPHP4-208ENST00000478423 FRG1Q14331 258 aaKnown RBP14.34□□□□□ -0.11
NPHP4-208ENST00000478423 TBCELQ5QJ74 424 aa14.34□□□□□ -0.11
NPHP4-208ENST00000478423 AFTPHQ6ULP2 937 aa14.34□□□□□ -0.11
NPHP4-208ENST00000478423 YTHDF3Q7Z739 585 aaKnown RBP14.34□□□□□ -0.11
NPHP4-208ENST00000478423 IFNL1Q8IU54 200 aa14.34□□□□□ -0.11
NPHP4-208ENST00000478423 QKIQ96PU8 341 aaKnown RBP eCLIP14.34□□□□□ -0.116e-11■■■■□ 19.4
NPHP4-208ENST00000478423 MRPL57Q9BQC6 102 aaKnown RBP14.34□□□□□ -0.11
NPHP4-208ENST00000478423 SDCBP2Q9H190 292 aa14.34□□□□□ -0.11
NPHP4-208ENST00000478423 CAPN10Q9HC96 672 aa14.34□□□□□ -0.11
NPHP4-208ENST00000478423 GRHL1Q9NZI5 618 aa14.34□□□□□ -0.11
NPHP4-208ENST00000478423 KLQ9UEF7 1012 aa14.34□□□□□ -0.11
NPHP4-208ENST00000478423 ATP6AP2A0A1C7CYW4 349 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms