RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 EDC3Q96F86 508 aaKnown RBP4.81□□□□□ -1.64
PTCD3-212ENST00000477520 MAGED4Q96JG8 741 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 C8orf48Q96LL4 319 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 PANX3Q96QZ0 392 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 SNX18Q96RF0 628 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 RANBP9Q96S59 729 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 SRPK1Q96SB4 655 aaKnown RBP4.81□□□□□ -1.64
PTCD3-212ENST00000477520 TRIM51Q9BSJ1 452 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 ZNF341Q9BYN7 854 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 SLC2A11Q9BYW1 496 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 CELF4Q9BZC1 486 aaKnown RBP4.81□□□□□ -1.64
PTCD3-212ENST00000477520 TRIM31Q9BZY9 425 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 DCLK3Q9C098 648 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 CDH19Q9H159 772 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 GANQ9H2C0 597 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 DHX33Q9H6R0 707 aaKnown RBP4.81□□□□□ -1.64
PTCD3-212ENST00000477520 SP140LQ9H930 580 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.81□□□□□ -1.64
PTCD3-212ENST00000477520 ANKHQ9HCJ1 492 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 ZNF304Q9HCX3 659 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 RIC8BQ9NVN3 520 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 TRNAU1APQ9NX07 287 aaKnown RBP4.81□□□□□ -1.64
PTCD3-212ENST00000477520 COMMD8Q9NX08 183 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 NPAP1Q9NZP6 1156 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 TMOD2Q9NZR1 351 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 RNF181Q9P0P0 153 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 STK39Q9UEW8 545 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 SLC7A8Q9UHI5 535 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 ING1Q9UK53 422 aaPredicted RBP4.81□□□□□ -1.64
PTCD3-212ENST00000477520 ZNRF3Q9ULT6 936 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 KCNJ14Q9UNX9 436 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 DNAJC16Q9Y2G8 782 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 SUGT1Q9Y2Z0 365 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 SBF1O95248 1867 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 SNED1Q8TER0 1413 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 LTBP1Q14766 1721 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 ARAP2Q8WZ64 1704 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 COL4A1P02462 1669 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 ZNF536O15090 1300 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 FAM205AQ6ZU69 1335 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 EXOC1LA0A1B0GW35 172 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 H3BNH8 94 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 H3BSA7 217 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 I3L4J1 428 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 K7EPI3 171 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 FCHO1O14526 889 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 SLC22A2O15244 555 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 SNX2O60749 519 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 PPP1R11O60927 126 aaPredicted RBP4.8□□□□□ -1.64
PTCD3-212ENST00000477520 GPC4O75487 556 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 SPAG6O75602 509 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 NOL4O94818 638 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 CRTAMO95727 393 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 FUCA1P04066 466 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 ABCB1P08183 1280 aaPredicted RBP4.8□□□□□ -1.64
PTCD3-212ENST00000477520 DLDP09622 509 aaKnown RBP4.8□□□□□ -1.64
PTCD3-212ENST00000477520 POLR2MP0CAP2 368 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 MCF2P10911 925 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 RPS12P25398 132 aaKnown RBP4.8□□□□□ -1.64
PTCD3-212ENST00000477520 KLRK1P26718 216 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 DCKP27707 260 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 IL12AP29459 219 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 IFNA8P32881 189 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 ADD2P35612 726 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 RXRGP48443 463 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 PRIM2P49643 509 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 KLK7P49862 253 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 AQP4P55087 323 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 OLR1P78380 273 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 GSTO1P78417 241 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 FOXD4Q12950 439 aaPredicted RBP4.8□□□□□ -1.64
PTCD3-212ENST00000477520 DLG1Q12959 904 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 ATP1A4Q13733 1029 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 COG2Q14746 738 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 TRIP10Q15642 601 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 ZNF174Q15697 407 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 ANO4Q32M45 955 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 GRAMD1BQ3KR37 738 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 C5orf22Q49AR2 442 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 AASDHQ4L235 1098 aaPredicted RBP4.8□□□□□ -1.64
PTCD3-212ENST00000477520 LGSNQ5TDP6 509 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 C9orf131Q5VYM1 1079 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 EGFLAMQ63HQ2 1017 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 DCAF15Q66K64 600 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 KRT80Q6KB66 452 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 FAM122CQ6P4D5 195 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 GADL1Q6ZQY3 521 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 LRRC55Q6ZSA7 311 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 FASTKD5Q7L8L6 764 aaKnown RBP4.8□□□□□ -1.64
PTCD3-212ENST00000477520 EEPD1Q7L9B9 569 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 PCGF5Q86SE9 256 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 ADAMTSL2Q86TH1 951 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 SETD3Q86TU7 594 aaPredicted RBP4.8□□□□□ -1.64
PTCD3-212ENST00000477520 GPBP1Q86WP2 473 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 SLC13A5Q86YT5 568 aaPredicted RBP4.8□□□□□ -1.64
PTCD3-212ENST00000477520 TICAM1Q8IUC6 712 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 HACE1Q8IYU2 909 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 ZNF654Q8IZM8 581 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 ZCCHC9Q8N567 271 aaKnown RBP4.8□□□□□ -1.64
PTCD3-212ENST00000477520 METTL25Q8N6Q8 603 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms