RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 GCNT1Q02742 428 aa11.59□□□□□ -0.55
BRCA1-213ENST00000476777 TLE1Q04724 770 aa11.59□□□□□ -0.55
BRCA1-213ENST00000476777 SGCGQ13326 291 aa11.59□□□□□ -0.55
BRCA1-213ENST00000476777 MEA1Q16626 185 aa11.59□□□□□ -0.55
BRCA1-213ENST00000476777 TBR1Q16650 682 aa11.59□□□□□ -0.55
BRCA1-213ENST00000476777 ALFQ53S48 1182 aa11.59□□□□□ -0.55
BRCA1-213ENST00000476777 PRRT3Q5FWE3 981 aa11.59□□□□□ -0.55
BRCA1-213ENST00000476777 ANKRD40Q6AI12 368 aa11.59□□□□□ -0.55
BRCA1-213ENST00000476777 JAMLQ86YT9 394 aa11.59□□□□□ -0.55
BRCA1-213ENST00000476777 ARHGEF19Q8IW93 802 aa11.59□□□□□ -0.55
BRCA1-213ENST00000476777 DCAF4L2Q8NA75 395 aa11.59□□□□□ -0.55
BRCA1-213ENST00000476777 PPP1R13BQ96KQ4 1090 aa11.59□□□□□ -0.55
BRCA1-213ENST00000476777 TBATAQ96M53 351 aa11.59□□□□□ -0.55
BRCA1-213ENST00000476777 LRRC61Q9BV99 259 aa11.59□□□□□ -0.55
BRCA1-213ENST00000476777 SRRTQ9BXP5 876 aaKnown RBP11.59□□□□□ -0.55
BRCA1-213ENST00000476777 CLPBQ9H078 707 aa11.59□□□□□ -0.55
BRCA1-213ENST00000476777 EPB41L5Q9HCM4 733 aa11.59□□□□□ -0.55
BRCA1-213ENST00000476777 RABGEF1Q9UJ41 708 aa11.59□□□□□ -0.55
BRCA1-213ENST00000476777 CNTN6Q9UQ52 1028 aa11.59□□□□□ -0.55
BRCA1-213ENST00000476777 PCDHGA4Q9Y5G9 962 aa11.59□□□□□ -0.55
BRCA1-213ENST00000476777 D6RAR5 112 aa11.58□□□□□ -0.56
BRCA1-213ENST00000476777 TMX2-CTNND1H3BSU7 103 aa11.58□□□□□ -0.56
BRCA1-213ENST00000476777 NVLO15381 856 aaKnown RBP11.58□□□□□ -0.56
BRCA1-213ENST00000476777 RHOCP08134 193 aa11.58□□□□□ -0.56
BRCA1-213ENST00000476777 GLI1P08151 1106 aa11.58□□□□□ -0.56
BRCA1-213ENST00000476777 LIPCP11150 499 aa11.58□□□□□ -0.56
BRCA1-213ENST00000476777 L1CAMP32004 1257 aa11.58□□□□□ -0.56
BRCA1-213ENST00000476777 RECQLP46063 649 aaPredicted RBP11.58□□□□□ -0.56
BRCA1-213ENST00000476777 MTA1Q13330 715 aa11.58□□□□□ -0.56
BRCA1-213ENST00000476777 PDCLQ13371 301 aa11.58□□□□□ -0.56
BRCA1-213ENST00000476777 UBAP2LQ14157 1087 aaKnown RBP11.58□□□□□ -0.56
BRCA1-213ENST00000476777 PARS2Q7L3T8 475 aaKnown RBP11.58□□□□□ -0.56
BRCA1-213ENST00000476777 SETD3Q86TU7 594 aaPredicted RBP11.58□□□□□ -0.56
BRCA1-213ENST00000476777 ZSCAN30Q86W11 494 aa11.58□□□□□ -0.56
BRCA1-213ENST00000476777 ZNF683Q8IZ20 524 aa11.58□□□□□ -0.56
BRCA1-213ENST00000476777 PHACTR4Q8IZ21 702 aa11.58□□□□□ -0.56
BRCA1-213ENST00000476777 DENND6BQ8NEG7 585 aa11.58□□□□□ -0.56
BRCA1-213ENST00000476777 ZNF606Q8WXB4 792 aa11.58□□□□□ -0.56
BRCA1-213ENST00000476777 ASB12Q8WXK4 309 aa11.58□□□□□ -0.56
BRCA1-213ENST00000476777 KREMEN1Q96MU8 473 aa11.58□□□□□ -0.56
BRCA1-213ENST00000476777 TSG101Q99816 390 aa11.58□□□□□ -0.56
BRCA1-213ENST00000476777 FOXP3Q9BZS1 431 aa11.58□□□□□ -0.56
BRCA1-213ENST00000476777 SIK2Q9H0K1 926 aa11.58□□□□□ -0.56
BRCA1-213ENST00000476777 ASNSD1Q9NWL6 643 aa11.58□□□□□ -0.56
BRCA1-213ENST00000476777 ARHGEF17Q96PE2 2063 aaPredicted RBP11.57□□□□□ -0.56
BRCA1-213ENST00000476777 A0A1W2PQM1 296 aa11.57□□□□□ -0.56
BRCA1-213ENST00000476777 TRIM49BA6NDI0 452 aa11.57□□□□□ -0.56
BRCA1-213ENST00000476777 TSPAN6O43657 245 aa11.57□□□□□ -0.56
BRCA1-213ENST00000476777 HSF2BPO75031 334 aa11.57□□□□□ -0.56
BRCA1-213ENST00000476777 PPFIA2O75334 1257 aa11.57□□□□□ -0.56
BRCA1-213ENST00000476777 GRAP2O75791 330 aa11.57□□□□□ -0.56
BRCA1-213ENST00000476777 CELA2BP08218 269 aaPredicted RBP11.57□□□□□ -0.56
BRCA1-213ENST00000476777 TSHRP16473 764 aa11.57□□□□□ -0.56
BRCA1-213ENST00000476777 WT1P19544 449 aaPredicted RBP11.57□□□□□ -0.56
BRCA1-213ENST00000476777 CCL7P80098 99 aa11.57□□□□□ -0.56
BRCA1-213ENST00000476777 NME3Q13232 169 aa11.57□□□□□ -0.56
BRCA1-213ENST00000476777 PTK2BQ14289 1009 aa11.57□□□□□ -0.56
BRCA1-213ENST00000476777 CLCA4Q14CN2 919 aa11.57□□□□□ -0.56
BRCA1-213ENST00000476777 COBLL1Q53SF7 1204 aa11.57□□□□□ -0.56
BRCA1-213ENST00000476777 ESRP1Q6NXG1 681 aaKnown RBP11.57□□□□□ -0.56
BRCA1-213ENST00000476777 VASH2Q86V25 355 aa11.57□□□□□ -0.56
BRCA1-213ENST00000476777 CCDC74AQ96AQ1 378 aa11.57□□□□□ -0.56
BRCA1-213ENST00000476777 CENPTQ96BT3 561 aa11.57□□□□□ -0.56
BRCA1-213ENST00000476777 SPATA32Q96LK8 384 aa11.57□□□□□ -0.56
BRCA1-213ENST00000476777 GFM1Q96RP9 751 aaKnown RBP11.57□□□□□ -0.56
BRCA1-213ENST00000476777 HEPHQ9BQS7 1158 aa11.57□□□□□ -0.56
BRCA1-213ENST00000476777 SLC13A1Q9BZW2 595 aa11.57□□□□□ -0.56
BRCA1-213ENST00000476777 CEP44Q9C0F1 390 aa11.57□□□□□ -0.56
BRCA1-213ENST00000476777 STRADBQ9C0K7 418 aa11.57□□□□□ -0.56
BRCA1-213ENST00000476777 SLC25A18Q9H1K4 315 aa11.57□□□□□ -0.56
BRCA1-213ENST00000476777 GOLPH3LQ9H4A5 285 aa11.57□□□□□ -0.56
BRCA1-213ENST00000476777 ANLNQ9NQW6 1124 aa11.57□□□□□ -0.56
BRCA1-213ENST00000476777 GEMIN8Q9NWZ8 242 aaKnown RBP11.57□□□□□ -0.56
BRCA1-213ENST00000476777 SEPT10Q9P0V9 454 aa11.57□□□□□ -0.56
BRCA1-213ENST00000476777 PISDQ9UG56 409 aa11.57□□□□□ -0.56
BRCA1-213ENST00000476777 SEPT3Q9UH03 358 aa11.57□□□□□ -0.56
BRCA1-213ENST00000476777 GGT7Q9UJ14 662 aa11.57□□□□□ -0.56
BRCA1-213ENST00000476777 DOCK4Q8N1I0 1966 aa11.57□□□□□ -0.56
BRCA1-213ENST00000476777 I6L893 689 aaPredicted RBP11.56□□□□□ -0.56
BRCA1-213ENST00000476777 P4HA2O15460 535 aa11.56□□□□□ -0.56
BRCA1-213ENST00000476777 MED7O43513 233 aa11.56□□□□□ -0.56
BRCA1-213ENST00000476777 ZMPSTE24O75844 475 aa11.56□□□□□ -0.56
BRCA1-213ENST00000476777 ZNF202O95125 648 aa11.56□□□□□ -0.56
BRCA1-213ENST00000476777 LETM1O95202 739 aaPredicted RBP11.56□□□□□ -0.56
BRCA1-213ENST00000476777 RPLP0P05388 317 aaKnown RBP11.56□□□□□ -0.56
BRCA1-213ENST00000476777 JMJD7P0C870 316 aa11.56□□□□□ -0.56
BRCA1-213ENST00000476777 GP1BBP13224 206 aa11.56□□□□□ -0.56
BRCA1-213ENST00000476777 KRT5P13647 590 aa11.56□□□□□ -0.56
BRCA1-213ENST00000476777 CCKBRP32239 447 aa11.56□□□□□ -0.56
BRCA1-213ENST00000476777 ABL2P42684 1182 aa11.56□□□□□ -0.56
BRCA1-213ENST00000476777 SERPINH1P50454 418 aaKnown RBP11.56□□□□□ -0.56
BRCA1-213ENST00000476777 CCNHP51946 323 aaPredicted RBP11.56□□□□□ -0.56
BRCA1-213ENST00000476777 THOP1P52888 689 aa11.56□□□□□ -0.56
BRCA1-213ENST00000476777 CYP4F2P78329 520 aa11.56□□□□□ -0.56
BRCA1-213ENST00000476777 LRRC63Q05C16 580 aa11.56□□□□□ -0.56
BRCA1-213ENST00000476777 CETN1Q12798 172 aa11.56□□□□□ -0.56
BRCA1-213ENST00000476777 CARD16Q5EG05 197 aa11.56□□□□□ -0.56
BRCA1-213ENST00000476777 EFHC1Q5JVL4 640 aa11.56□□□□□ -0.56
BRCA1-213ENST00000476777 MANEAQ5SRI9 462 aa11.56□□□□□ -0.56
BRCA1-213ENST00000476777 OTUD1Q5VV17 481 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms