RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 IPO11Q9UI26 975 aaKnown RBP7.08□□□□□ -1.28
CKS1B-205ENST00000473344 SATB2Q9UPW6 733 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 ACACAQ13085 2346 aa7.08□□□□□ -1.28
CKS1B-205ENST00000473344 URB1O60287 2271 aaKnown RBP7.08□□□□□ -1.28
CKS1B-205ENST00000473344 BOD1L1Q8NFC6 3051 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 CPED1A4D0V7 1026 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 K7ESM1 405 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 HSF2BPO75031 334 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 NEBLO76041 1014 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 PAK4O96013 591 aaPredicted RBP7.07□□□□□ -1.28
CKS1B-205ENST00000473344 RHOCP08134 193 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 GLI1P08151 1106 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 CCNYL3P0C7X3 344 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 SRCP12931 536 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 MYF5P13349 255 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 C6P13671 934 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 PPP1R2P41236 205 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 CDH4P55283 916 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 SNX16P57768 344 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 RPS21P63220 83 aaKnown RBP7.07□□□□□ -1.28
CKS1B-205ENST00000473344 PITX1P78337 314 aaPredicted RBP7.07□□□□□ -1.28
CKS1B-205ENST00000473344 PDCLQ13371 301 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 LY6DQ14210 128 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 TAF5Q15542 800 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 MEA1Q16626 185 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 CDKN3Q16667 212 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 ISXQ2M1V0 245 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 OR6B2Q6IFH4 312 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 LRRC31Q6UY01 552 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 CCDC81Q6ZN84 652 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 GCNT7Q6ZNI0 430 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 ERN2Q76MJ5 926 aaKnown RBP7.07□□□□□ -1.28
CKS1B-205ENST00000473344 ABI3BPQ7Z7G0 1075 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 PARGQ86W56 976 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 ARHGEF19Q8IW93 802 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 DEFB106AQ8N104 65 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 ARL14Q8N4G2 192 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 TMIEQ8NEW7 156 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 OR2A12Q8NGT7 310 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 GRIN3AQ8TCU5 1115 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 ZNF606Q8WXB4 792 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 GLMNQ92990 594 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 GRAMD1AQ96CP6 724 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 ALG14Q96F25 216 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 DHTKD1Q96HY7 919 aaPredicted RBP7.07□□□□□ -1.28
CKS1B-205ENST00000473344 VCPIP1Q96JH7 1222 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 NOX5Q96PH1 765 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 IL12RB2Q99665 862 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 SIK2Q9H0K1 926 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 CLMPQ9H6B4 373 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 SYNCQ9H7C4 482 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 UBE2TQ9NPD8 197 aaPredicted RBP7.07□□□□□ -1.28
CKS1B-205ENST00000473344 IL36AQ9UHA7 158 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 HS3ST2Q9Y278 367 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.07□□□□□ -1.28
CKS1B-205ENST00000473344 HS3ST4Q9Y661 456 aa7.07□□□□□ -1.28
CKS1B-205ENST00000473344 FLNBO75369 2602 aaKnown RBP7.06□□□□□ -1.28
CKS1B-205ENST00000473344 NUMA1Q14980 2115 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 BICDL2A1A5D9 508 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 K7ERQ8 282 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 M0QYT0 321 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 NEMP1O14524 444 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 FPGTO14772 594 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 AQP9O43315 295 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 SLC28A2O43868 658 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 PAGE1O75459 146 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 GRAP2O75791 330 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 ENDOD1O94919 500 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 GNA14O95837 355 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 MT-CO1P00395 513 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 AFPP02771 609 aaKnown RBP7.06□□□□□ -1.28
CKS1B-205ENST00000473344 CSF2P04141 144 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 CTSLP07711 333 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 GIMD1P0DJR0 217 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 TGM2P21980 687 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 RRM1P23921 792 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 RABIFP47224 123 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 DNA2P51530 1060 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 NEK3P51956 506 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 GSDMDP57764 484 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 SGCGQ13326 291 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 EIF4EBP2Q13542 120 aaPredicted RBP7.06□□□□□ -1.28
CKS1B-205ENST00000473344 PDE1CQ14123 709 aaPredicted RBP7.06□□□□□ -1.28
CKS1B-205ENST00000473344 NR0B2Q15466 257 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 LCE2CQ5TA81 110 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 SEL1L3Q68CR1 1132 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 ISM2Q6H9L7 571 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 KLHL10Q6JEL2 608 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 KIAA1161Q6NSJ0 714 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 RETSATQ6NUM9 610 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 TMCO3Q6UWJ1 677 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 KYAT3Q6YP21 454 aaKnown RBP7.06□□□□□ -1.28
CKS1B-205ENST00000473344 RBM44Q6ZP01 1051 aaKnown RBP7.06□□□□□ -1.28
CKS1B-205ENST00000473344 C11orf57Q6ZUT1 292 aaPredicted RBP7.06□□□□□ -1.28
CKS1B-205ENST00000473344 ENOSF1Q7L5Y1 443 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 EFL1Q7Z2Z2 1120 aaKnown RBP7.06□□□□□ -1.28
CKS1B-205ENST00000473344 PRICKLE2Q7Z3G6 844 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 DRC7Q8IY82 874 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 FMR1NBQ8N0W7 255 aaPredicted RBP7.06□□□□□ -1.28
CKS1B-205ENST00000473344 SLC22A18ASQ8N1D0 253 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms