RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 LETM1O95202 739 aaPredicted RBP6.14□□□□□ -1.43
RTF1-203ENST00000473214 PCDH8O95206 1070 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 PRAMEF1O95521 474 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 PENKP01210 267 aaPredicted RBP6.14□□□□□ -1.43
RTF1-203ENST00000473214 GLI1P08151 1106 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 PFKMP08237 780 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 CELA3BP08861 270 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 CCDC192P0DO97 292 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 PFKLP17858 780 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 GLRA2P23416 452 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 LONP1P36776 959 aaKnown RBP6.14□□□□□ -1.43
RTF1-203ENST00000473214 PBX3P40426 434 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 MDH1P40925 334 aaKnown RBP6.14□□□□□ -1.43
RTF1-203ENST00000473214 BCL6P41182 706 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 OR1G1P47890 313 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 NR2C2P49116 596 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 STAT2P52630 851 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 CARD18P57730 90 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 EXOSC9Q06265 439 aaKnown RBP6.14□□□□□ -1.43
RTF1-203ENST00000473214 SF3A3Q12874 501 aaKnown RBP eCLIP6.14□□□□□ -1.43
RTF1-203ENST00000473214 IL24Q13007 206 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 CTBP1Q13363 440 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 ALCAMQ13740 583 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 HYAL4Q2M3T9 481 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 CRY2Q49AN0 593 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 LRRC23Q53EV4 343 aaPredicted RBP6.14□□□□□ -1.43
RTF1-203ENST00000473214 ZNF484Q5JVG2 852 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 COLEC12Q5KU26 742 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 HEPHL1Q6MZM0 1159 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 PAPD4Q6PIY7 484 aaKnown RBP6.14□□□□□ -1.43
RTF1-203ENST00000473214 RBM43Q6ZSC3 357 aaKnown RBP6.14□□□□□ -1.43
RTF1-203ENST00000473214 TTLL10Q6ZVT0 673 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 TAS2R42Q7RTR8 314 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 RASGRP3Q8IV61 690 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 MCEMP1Q8IX19 187 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 PHC2Q8IXK0 858 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 OR56A3Q8NH54 315 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 TEKT4Q8WW24 435 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 SAAL1Q96ER3 474 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 TMX3Q96JJ7 454 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 TTC25Q96NG3 672 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 FCRL3Q96P31 734 aaPredicted RBP6.14□□□□□ -1.43
RTF1-203ENST00000473214 DGAT2Q96PD7 388 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 UHRF1Q96T88 793 aaPredicted RBP6.14□□□□□ -1.43
RTF1-203ENST00000473214 MGME1Q9BQP7 344 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 FOXQ1Q9C009 403 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 DENND2DQ9H6A0 471 aaPredicted RBP6.14□□□□□ -1.43
RTF1-203ENST00000473214 SCPEP1Q9HB40 452 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 RBM12Q9NTZ6 932 aaKnown RBP6.14□□□□□ -1.43
RTF1-203ENST00000473214 LMCD1Q9NZU5 365 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 SH3BP4Q9P0V3 963 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 SPASTQ9UBP0 616 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 ATP6V1HQ9UI12 483 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 SCOCQ9UIL1 159 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 ANAPC2Q9UJX6 822 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 CA14Q9ULX7 337 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 MTMR6Q9Y217 621 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 TIMM13Q9Y5L4 95 aaPredicted RBP6.14□□□□□ -1.43
RTF1-203ENST00000473214 SPATA31A1Q5TZJ5 1347 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 NRXN1Q9ULB1 1477 aa6.14□□□□□ -1.43
RTF1-203ENST00000473214 SLC9B1P1A6NJY1 282 aa6.13□□□□□ -1.43
RTF1-203ENST00000473214 ACOD1A6NK06 481 aa6.13□□□□□ -1.43
RTF1-203ENST00000473214 SAC3D1A6NKF1 404 aa6.13□□□□□ -1.43
RTF1-203ENST00000473214 ENO4A6NNW6 628 aa6.13□□□□□ -1.43
RTF1-203ENST00000473214 H0Y858 1186 aa6.13□□□□□ -1.43
RTF1-203ENST00000473214 H0YIN7 160 aa6.13□□□□□ -1.43
RTF1-203ENST00000473214 FOXP2O15409 715 aa6.13□□□□□ -1.43
RTF1-203ENST00000473214 NUDT21O43809 227 aaKnown RBP6.13□□□□□ -1.43
RTF1-203ENST00000473214 TULP3O75386 442 aa6.13□□□□□ -1.43
RTF1-203ENST00000473214 MTX2O75431 263 aa6.13□□□□□ -1.43
RTF1-203ENST00000473214 NTSR2O95665 410 aa6.13□□□□□ -1.43
RTF1-203ENST00000473214 ZNF3P17036 446 aa6.13□□□□□ -1.43
RTF1-203ENST00000473214 PRKCHP24723 683 aa6.13□□□□□ -1.43
RTF1-203ENST00000473214 CHRNA3P32297 505 aa6.13□□□□□ -1.43
RTF1-203ENST00000473214 CCT6AP40227 531 aaKnown RBP6.13□□□□□ -1.43
RTF1-203ENST00000473214 SLC15A1P46059 708 aa6.13□□□□□ -1.43
RTF1-203ENST00000473214 PEX5P50542 639 aa6.13□□□□□ -1.43
RTF1-203ENST00000473214 PRRX1P54821 245 aa6.13□□□□□ -1.43
RTF1-203ENST00000473214 RPL11P62913 178 aaKnown RBP6.13□□□□□ -1.43
RTF1-203ENST00000473214 SARNPP82979 210 aaKnown RBP6.13□□□□□ -1.43
RTF1-203ENST00000473214 PMP22Q01453 160 aa6.13□□□□□ -1.43
RTF1-203ENST00000473214 GOLGA8DPQ0D2H9 430 aa6.13□□□□□ -1.43
RTF1-203ENST00000473214 TMEM115Q12893 351 aaPredicted RBP6.13□□□□□ -1.43
RTF1-203ENST00000473214 TARDBPQ13148 414 aaKnown RBP eCLIP6.13□□□□□ -1.43
RTF1-203ENST00000473214 TUBB3Q13509 450 aa6.13□□□□□ -1.43
RTF1-203ENST00000473214 DDX39BQ13838 428 aaKnown RBP6.13□□□□□ -1.43
RTF1-203ENST00000473214 RPS6KA1Q15418 735 aa6.13□□□□□ -1.43
RTF1-203ENST00000473214 CHRNA2Q15822 529 aa6.13□□□□□ -1.43
RTF1-203ENST00000473214 SLC5A9Q2M3M2 681 aa6.13□□□□□ -1.43
RTF1-203ENST00000473214 GALNTL6Q49A17 601 aa6.13□□□□□ -1.43
RTF1-203ENST00000473214 GLE1Q53GS7 698 aaKnown RBP6.13□□□□□ -1.43
RTF1-203ENST00000473214 CCDC178Q5BJE1 867 aa6.13□□□□□ -1.43
RTF1-203ENST00000473214 TTC38Q5R3I4 469 aa6.13□□□□□ -1.43
RTF1-203ENST00000473214 RIPPLY2Q5TAB7 128 aa6.13□□□□□ -1.43
RTF1-203ENST00000473214 PRAMEF9Q5VWM5 478 aa6.13□□□□□ -1.43
RTF1-203ENST00000473214 RCSD1Q6JBY9 416 aa6.13□□□□□ -1.43
RTF1-203ENST00000473214 KIAA1841Q6NSI8 718 aa6.13□□□□□ -1.43
RTF1-203ENST00000473214 CORO6Q6QEF8 472 aa6.13□□□□□ -1.43
RTF1-203ENST00000473214 UNQ6494/PRO21346Q6UXR6 183 aa6.13□□□□□ -1.43
RTF1-203ENST00000473214 KIF6Q6ZMV9 814 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms