RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 RPS27LQ71UM5 84 aaKnown RBP21.39■■□□□ 1.01
COL18A1-207ENST00000473212 TMEM126BQ8IUX1 230 aa21.39■■□□□ 1.01
COL18A1-207ENST00000473212 CEP97Q8IW35 865 aa21.39■■□□□ 1.01
COL18A1-207ENST00000473212 CENPLQ8N0S6 344 aaPredicted RBP21.39■■□□□ 1.01
COL18A1-207ENST00000473212 PDCD6IPQ8WUM4 868 aaKnown RBP21.39■■□□□ 1.01
COL18A1-207ENST00000473212 PAAF1Q9BRP4 392 aa21.39■■□□□ 1.01
COL18A1-207ENST00000473212 TKTL2Q9H0I9 626 aa21.39■■□□□ 1.01
COL18A1-207ENST00000473212 PTTG2Q9NZH5 202 aa21.39■■□□□ 1.01
COL18A1-207ENST00000473212 VTI1BQ9UEU0 232 aa21.39■■□□□ 1.01
COL18A1-207ENST00000473212 FBXW11Q9UKB1 542 aa21.39■■□□□ 1.01
COL18A1-207ENST00000473212 PRSS51A0A1B0GVH4 220 aa21.38■■□□□ 1.01
COL18A1-207ENST00000473212 SLC22A2O15244 555 aa21.38■■□□□ 1.01
COL18A1-207ENST00000473212 DLX3O60479 287 aa21.38■■□□□ 1.01
COL18A1-207ENST00000473212 BCAS2O75934 225 aaPredicted RBP21.38■■□□□ 1.01
COL18A1-207ENST00000473212 TNFAIP8O95379 198 aa21.38■■□□□ 1.01
COL18A1-207ENST00000473212 AHSGP02765 367 aa21.38■■□□□ 1.01
COL18A1-207ENST00000473212 ASLP04424 464 aa21.38■■□□□ 1.01
COL18A1-207ENST00000473212 FAM200BP0CF97 657 aa21.38■■□□□ 1.01
COL18A1-207ENST00000473212 CCNYL1Q8N7R7 359 aa21.38■■□□□ 1.01
COL18A1-207ENST00000473212 C3orf58Q8NDZ4 430 aa21.38■■□□□ 1.01
COL18A1-207ENST00000473212 STYXQ8WUJ0 223 aa21.38■■□□□ 1.01
COL18A1-207ENST00000473212 MRPS26Q9BYN8 205 aaKnown RBP21.38■■□□□ 1.01
COL18A1-207ENST00000473212 ATXN3LQ9H3M9 355 aa21.38■■□□□ 1.01
COL18A1-207ENST00000473212 ATXN10Q9UBB4 475 aa21.38■■□□□ 1.01
COL18A1-207ENST00000473212 OR12D3Q9UGF7 316 aa21.38■■□□□ 1.01
COL18A1-207ENST00000473212 SLC2A6Q9UGQ3 507 aa21.38■■□□□ 1.01
COL18A1-207ENST00000473212 TTC3P53804 2025 aa21.38■■□□□ 1.01
COL18A1-207ENST00000473212 ERI2A8K979 691 aaKnown RBP21.38■■□□□ 1.01
COL18A1-207ENST00000473212 KCNE1P15382 129 aa21.38■■□□□ 1.01
COL18A1-207ENST00000473212 HK2P52789 917 aa21.38■■□□□ 1.01
COL18A1-207ENST00000473212 AHI1Q8N157 1196 aa21.38■■□□□ 1.01
COL18A1-207ENST00000473212 DRAXINQ8NBI3 349 aaPredicted RBP21.38■■□□□ 1.01
COL18A1-207ENST00000473212 COLEC11Q9BWP8 271 aa21.38■■□□□ 1.01
COL18A1-207ENST00000473212 RHOJQ9H4E5 214 aa21.38■■□□□ 1.01
COL18A1-207ENST00000473212 ZNF408Q9H9D4 720 aa21.38■■□□□ 1.01
COL18A1-207ENST00000473212 RNF181Q9P0P0 153 aa21.38■■□□□ 1.01
COL18A1-207ENST00000473212 XPR1Q9UBH6 696 aa21.38■■□□□ 1.01
COL18A1-207ENST00000473212 FIS1Q9Y3D6 152 aa21.38■■□□□ 1.01
COL18A1-207ENST00000473212 NEMP2A6NFY4 417 aa21.37■■□□□ 1.01
COL18A1-207ENST00000473212 HOXD8P13378 290 aaPredicted RBP21.37■■□□□ 1.01
COL18A1-207ENST00000473212 SLC12A1Q13621 1099 aa21.37■■□□□ 1.01
COL18A1-207ENST00000473212 HERC3Q15034 1050 aa21.37■■□□□ 1.01
COL18A1-207ENST00000473212 MYLK3Q32MK0 819 aa21.37■■□□□ 1.01
COL18A1-207ENST00000473212 GPR142Q7Z601 462 aa21.37■■□□□ 1.01
COL18A1-207ENST00000473212 ZFP28Q8NHY6 868 aa21.37■■□□□ 1.01
COL18A1-207ENST00000473212 KCTD13Q8WZ19 329 aa21.37■■□□□ 1.01
COL18A1-207ENST00000473212 ZNF696Q9H7X3 374 aa21.37■■□□□ 1.01
COL18A1-207ENST00000473212 TCAF2A6NFQ2 919 aa21.37■■□□□ 1.01
COL18A1-207ENST00000473212 ACOT8O14734 319 aa21.37■■□□□ 1.01
COL18A1-207ENST00000473212 TADA2AO75478 443 aa21.37■■□□□ 1.01
COL18A1-207ENST00000473212 RNASEH2AO75792 299 aaKnown RBP21.37■■□□□ 1.01
COL18A1-207ENST00000473212 VAPBO95292 243 aa21.37■■□□□ 1.01
COL18A1-207ENST00000473212 PGK1P00558 417 aa21.37■■□□□ 1.01
COL18A1-207ENST00000473212 HADHAP40939 763 aa21.37■■□□□ 1.01
COL18A1-207ENST00000473212 PNPLA4P41247 253 aa21.37■■□□□ 1.01
COL18A1-207ENST00000473212 PABPC1LQ4VXU2 614 aaKnown RBP21.37■■□□□ 1.01
COL18A1-207ENST00000473212 XKR4Q5GH76 650 aa21.37■■□□□ 1.01
COL18A1-207ENST00000473212 TWF2Q6IBS0 349 aaKnown RBP21.37■■□□□ 1.01
COL18A1-207ENST00000473212 LRRC8EQ6NSJ5 796 aa21.37■■□□□ 1.01
COL18A1-207ENST00000473212 B3GNT6Q6ZMB0 384 aa21.37■■□□□ 1.01
COL18A1-207ENST00000473212 BHLHA9Q7RTU4 235 aa21.37■■□□□ 1.01
COL18A1-207ENST00000473212 FAM35AQ86V20 835 aa21.37■■□□□ 1.01
COL18A1-207ENST00000473212 SNX31Q8N9S9 440 aa21.37■■□□□ 1.01
COL18A1-207ENST00000473212 DLG3Q92796 817 aa21.37■■□□□ 1.01
COL18A1-207ENST00000473212 ZFRQ96KR1 1074 aaKnown RBP21.37■■□□□ 1.01
COL18A1-207ENST00000473212 SIK2Q9H0K1 926 aa21.37■■□□□ 1.01
COL18A1-207ENST00000473212 MYLKQ15746 1914 aa21.37■■□□□ 1.01
COL18A1-207ENST00000473212 TARM1B6A8C7 271 aa21.36■■□□□ 1.01
COL18A1-207ENST00000473212 BTBD19C9JJ37 291 aa21.36■■□□□ 1.01
COL18A1-207ENST00000473212 SLCO1B7G3V0H7 640 aa21.36■■□□□ 1.01
COL18A1-207ENST00000473212 AURKAO14965 403 aa21.36■■□□□ 1.01
COL18A1-207ENST00000473212 FAM58BPP0C7Q3 252 aa21.36■■□□□ 1.01
COL18A1-207ENST00000473212 ADSLP30566 484 aaPredicted RBP21.36■■□□□ 1.01
COL18A1-207ENST00000473212 PRKAA2P54646 552 aa21.36■■□□□ 1.01
COL18A1-207ENST00000473212 PAN2Q504Q3 1202 aaKnown RBP21.36■■□□□ 1.01
COL18A1-207ENST00000473212 ITPRIPL1Q6GPH6 555 aa21.36■■□□□ 1.01
COL18A1-207ENST00000473212 LPPQ93052 612 aa21.36■■□□□ 1.01
COL18A1-207ENST00000473212 NXNL1Q96CM4 212 aa21.36■■□□□ 1.01
COL18A1-207ENST00000473212 SENP8Q96LD8 212 aa21.36■■□□□ 1.01
COL18A1-207ENST00000473212 TEKT5Q96M29 485 aa21.36■■□□□ 1.01
COL18A1-207ENST00000473212 TINF2Q9BSI4 451 aa21.36■■□□□ 1.01
COL18A1-207ENST00000473212 ADA2Q9NZK5 511 aa21.36■■□□□ 1.01
COL18A1-207ENST00000473212 SCN4AP35499 1836 aa21.36■■□□□ 1.01
COL18A1-207ENST00000473212 GABRDO14764 452 aa21.36■■□□□ 1.01
COL18A1-207ENST00000473212 NCAM2O15394 837 aa21.36■■□□□ 1.01
COL18A1-207ENST00000473212 TRPA1O75762 1119 aa21.36■■□□□ 1.01
COL18A1-207ENST00000473212 BEX3Q00994 111 aa21.36■■□□□ 1.01
COL18A1-207ENST00000473212 GALNT2Q10471 571 aa21.36■■□□□ 1.01
COL18A1-207ENST00000473212 CDH17Q12864 832 aa21.36■■□□□ 1.01
COL18A1-207ENST00000473212 TSTD2Q5T7W7 516 aa21.36■■□□□ 1.01
COL18A1-207ENST00000473212 ESRP1Q6NXG1 681 aaKnown RBP21.36■■□□□ 1.01
COL18A1-207ENST00000473212 TOP6BLQ8N6T0 577 aa21.36■■□□□ 1.01
COL18A1-207ENST00000473212 TMEM102Q8N9M5 508 aaPredicted RBP21.36■■□□□ 1.01
COL18A1-207ENST00000473212 IPMKQ8NFU5 416 aa21.36■■□□□ 1.01
COL18A1-207ENST00000473212 HDAC11Q96DB2 347 aa21.36■■□□□ 1.01
COL18A1-207ENST00000473212 RBM38Q9H0Z9 239 aaKnown RBP21.36■■□□□ 1.01
COL18A1-207ENST00000473212 TRHDEQ9UKU6 1024 aa21.36■■□□□ 1.01
COL18A1-207ENST00000473212 DFFAO00273 331 aa21.35■■□□□ 1.01
COL18A1-207ENST00000473212 PTK2BQ14289 1009 aa21.35■■□□□ 1.01
COL18A1-207ENST00000473212 NOMO2Q5JPE7 1267 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms