RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 DEFB107AQ8IZN7 70 aa14.87□□□□□ -0.03
CBWD3-205ENST00000469687 TTC9BQ8N6N2 239 aa14.87□□□□□ -0.03
CBWD3-205ENST00000469687 PPHLN1Q8NEY8 458 aaKnown RBP14.87□□□□□ -0.03
CBWD3-205ENST00000469687 FAM136AQ96C01 138 aa14.87□□□□□ -0.03
CBWD3-205ENST00000469687 GPR78Q96P69 363 aa14.87□□□□□ -0.03
CBWD3-205ENST00000469687 TRIM62Q9BVG3 475 aa14.87□□□□□ -0.03
CBWD3-205ENST00000469687 DRC3Q9H069 523 aa14.87□□□□□ -0.03
CBWD3-205ENST00000469687 FAM96AQ9H5X1 160 aa14.87□□□□□ -0.03
CBWD3-205ENST00000469687 TREX1Q9NSU2 369 aa14.87□□□□□ -0.03
CBWD3-205ENST00000469687 ZNF212Q9UDV6 495 aa14.87□□□□□ -0.03
CBWD3-205ENST00000469687 IPO11Q9UI26 975 aaKnown RBP14.87□□□□□ -0.03
CBWD3-205ENST00000469687 ZDHHC2Q9UIJ5 367 aa14.87□□□□□ -0.03
CBWD3-205ENST00000469687 G3BP2Q9UN86 482 aaKnown RBP14.87□□□□□ -0.03
CBWD3-205ENST00000469687 J3KR12 359 aa14.86□□□□□ -0.03
CBWD3-205ENST00000469687 AP3B1O00203 1094 aa14.86□□□□□ -0.03
CBWD3-205ENST00000469687 MATN2O00339 956 aa14.86□□□□□ -0.03
CBWD3-205ENST00000469687 DLX3O60479 287 aa14.86□□□□□ -0.03
CBWD3-205ENST00000469687 BAG2O95816 211 aa14.86□□□□□ -0.03
CBWD3-205ENST00000469687 SERPINB5P36952 375 aa14.86□□□□□ -0.03
CBWD3-205ENST00000469687 GEMP55040 296 aa14.86□□□□□ -0.03
CBWD3-205ENST00000469687 KLF10Q13118 480 aa14.86□□□□□ -0.03
CBWD3-205ENST00000469687 CUL3Q13618 768 aa14.86□□□□□ -0.03
CBWD3-205ENST00000469687 SLC12A1Q13621 1099 aa14.86□□□□□ -0.03
CBWD3-205ENST00000469687 TSTD2Q5T7W7 516 aa14.86□□□□□ -0.03
CBWD3-205ENST00000469687 C6orf163Q5TEZ5 329 aa14.86□□□□□ -0.03
CBWD3-205ENST00000469687 RANBP10Q6VN20 620 aa14.86□□□□□ -0.03
CBWD3-205ENST00000469687 LSMEM2Q8N112 164 aa14.86□□□□□ -0.03
CBWD3-205ENST00000469687 LZTR1Q8N653 840 aa14.86□□□□□ -0.03
CBWD3-205ENST00000469687 STYXQ8WUJ0 223 aa14.86□□□□□ -0.03
CBWD3-205ENST00000469687 PYDC1Q8WXC3 89 aa14.86□□□□□ -0.03
CBWD3-205ENST00000469687 KLHL5Q96PQ7 755 aa14.86□□□□□ -0.03
CBWD3-205ENST00000469687 NUF2Q9BZD4 464 aa14.86□□□□□ -0.03
CBWD3-205ENST00000469687 ILKAPQ9H0C8 392 aaPredicted RBP14.86□□□□□ -0.03
CBWD3-205ENST00000469687 TCF7L2Q9NQB0 619 aa14.86□□□□□ -0.03
CBWD3-205ENST00000469687 NSMCE4AQ9NXX6 385 aa14.86□□□□□ -0.03
CBWD3-205ENST00000469687 CDH22Q9UJ99 828 aa14.86□□□□□ -0.03
CBWD3-205ENST00000469687 PACSIN3Q9UKS6 424 aa14.86□□□□□ -0.03
CBWD3-205ENST00000469687 ANKRD6Q9Y2G4 727 aa14.86□□□□□ -0.03
CBWD3-205ENST00000469687 PLXNA3P51805 1871 aa14.86□□□□□ -0.03
CBWD3-205ENST00000469687 SOAT2O75908 522 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 CNTN5O94779 1100 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 PEX11BO96011 259 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 HAPLN1P10915 354 aaPredicted RBP14.85□□□□□ -0.03
CBWD3-205ENST00000469687 COX4I1P13073 169 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 TYMPP19971 482 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 GLDCP23378 1020 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 TAS2R39P59534 338 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 RAB10P61026 200 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 TRIM71Q2Q1W2 868 aaKnown RBP14.85□□□□□ -0.03
CBWD3-205ENST00000469687 ALFQ53S48 1182 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 CLLU1OSQ5K130 101 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 TCHHL1Q5QJ38 904 aaPredicted RBP14.85□□□□□ -0.03
CBWD3-205ENST00000469687 PPM1LQ5SGD2 360 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 RBM20Q5T481 1227 aaKnown RBP14.85□□□□□ -0.03
CBWD3-205ENST00000469687 RNF111Q6ZNA4 994 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 TMC7Q7Z402 723 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 HPS6Q86YV9 775 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 CMTM5Q96DZ9 223 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 SGF29Q96ES7 293 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 UROC1Q96N76 676 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 LENG8Q96PV6 779 aaPredicted RBP14.85□□□□□ -0.03
CBWD3-205ENST00000469687 NDNQ99608 321 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 DNAJB4Q9UDY4 337 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 NOD1Q9Y239 953 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 PRG3Q9Y2Y8 225 aaPredicted RBP14.85□□□□□ -0.03
CBWD3-205ENST00000469687 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.85□□□□□ -0.03
CBWD3-205ENST00000469687 GRID2O43424 1007 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 CABYRO75952 493 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 TBX18O95935 607 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 SLC10A3P09131 477 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 ELNP15502 786 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 PAX7P23759 505 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 DNAJB2P25686 324 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 HADHAP40939 763 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 MLLT6P55198 1093 aaPredicted RBP14.85□□□□□ -0.03
CBWD3-205ENST00000469687 WNT3AP56704 352 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 LSM12Q3MHD2 195 aaKnown RBP14.85□□□□□ -0.03
CBWD3-205ENST00000469687 FAM219BQ5XKK7 198 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 TMEM198Q66K66 360 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 CCSAPQ6IQ19 270 aaPredicted RBP14.85□□□□□ -0.03
CBWD3-205ENST00000469687 PGM2L1Q6PCE3 622 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 CNSTQ6PJW8 725 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 KLHDC9Q8NEP7 349 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 SREK1Q8WXA9 508 aaKnown RBP14.85□□□□□ -0.03
CBWD3-205ENST00000469687 HMCESQ96FZ2 354 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 ELMO2Q96JJ3 720 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 NT5MQ9NPB1 228 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 ENTPD7Q9NQZ7 604 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 GMIPQ9P107 970 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 PCDHB8Q9UN66 801 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 ACOT9Q9Y305 439 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 RAP2CQ9Y3L5 183 aa14.85□□□□□ -0.03
CBWD3-205ENST00000469687 NEMP2A6NFY4 417 aa14.84□□□□□ -0.03
CBWD3-205ENST00000469687 TMEM233B4DJY2 109 aa14.84□□□□□ -0.03
CBWD3-205ENST00000469687 CCL22O00626 93 aa14.84□□□□□ -0.03
CBWD3-205ENST00000469687 CCNT2O60583 730 aaKnown RBP14.84□□□□□ -0.03
CBWD3-205ENST00000469687 GJB3O75712 270 aa14.84□□□□□ -0.03
CBWD3-205ENST00000469687 NEBLO76041 1014 aa14.84□□□□□ -0.03
CBWD3-205ENST00000469687 STMN1P16949 149 aa14.84□□□□□ -0.03
CBWD3-205ENST00000469687 TFEBP19484 476 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms