RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 GBA3Q9H227 469 aa15.75■□□□□ 0.11
CHD1L-205ENST00000467213 AFG3L2Q9Y4W6 797 aa15.75■□□□□ 0.11
CHD1L-205ENST00000467213 A0A087X1B8 175 aa15.75■□□□□ 0.11
CHD1L-205ENST00000467213 CCDC162PA2VCL2 907 aa15.75■□□□□ 0.11
CHD1L-205ENST00000467213 TK2O00142 265 aa15.75■□□□□ 0.11
CHD1L-205ENST00000467213 PSMD12O00232 456 aaPredicted RBP15.75■□□□□ 0.11
CHD1L-205ENST00000467213 DCLK1O15075 740 aa15.75■□□□□ 0.11
CHD1L-205ENST00000467213 SERPINB7O75635 380 aa15.75■□□□□ 0.11
CHD1L-205ENST00000467213 RAD17O75943 681 aa15.75■□□□□ 0.11
CHD1L-205ENST00000467213 SNRPB2P08579 225 aaKnown RBP15.75■□□□□ 0.11
CHD1L-205ENST00000467213 TFE3P19532 575 aaPredicted RBP15.75■□□□□ 0.11
CHD1L-205ENST00000467213 BCAT1P54687 386 aa15.75■□□□□ 0.11
CHD1L-205ENST00000467213 OSTNP61366 133 aa15.75■□□□□ 0.11
CHD1L-205ENST00000467213 RELAQ04206 551 aa15.75■□□□□ 0.11
CHD1L-205ENST00000467213 C16orf72Q14CZ0 275 aa15.75■□□□□ 0.11
CHD1L-205ENST00000467213 AMHR2Q16671 573 aa15.75■□□□□ 0.11
CHD1L-205ENST00000467213 CLVS1Q8IUQ0 354 aaPredicted RBP15.75■□□□□ 0.11
CHD1L-205ENST00000467213 FSTL5Q8N475 847 aaPredicted RBP15.75■□□□□ 0.11
CHD1L-205ENST00000467213 SPPL2BQ8TCT7 592 aa15.75■□□□□ 0.11
CHD1L-205ENST00000467213 C9orf16Q9BUW7 83 aa15.75■□□□□ 0.11
CHD1L-205ENST00000467213 MRPL46Q9H2W6 279 aaKnown RBP15.75■□□□□ 0.11
CHD1L-205ENST00000467213 PRDM12Q9H4Q4 367 aa15.75■□□□□ 0.11
CHD1L-205ENST00000467213 RPF2Q9H7B2 306 aaKnown RBP15.75■□□□□ 0.11
CHD1L-205ENST00000467213 SETD4Q9NVD3 440 aa15.75■□□□□ 0.11
CHD1L-205ENST00000467213 ABCD2Q9UBJ2 740 aa15.75■□□□□ 0.11
CHD1L-205ENST00000467213 CROTQ9UKG9 612 aa15.75■□□□□ 0.11
CHD1L-205ENST00000467213 SNX13Q9Y5W8 968 aa15.75■□□□□ 0.11
CHD1L-205ENST00000467213 PRORSD1PA6NEY8 169 aa15.74■□□□□ 0.11
CHD1L-205ENST00000467213 FBP2O00757 339 aa15.74■□□□□ 0.11
CHD1L-205ENST00000467213 DLGAP1O14490 977 aa15.74■□□□□ 0.11
CHD1L-205ENST00000467213 XPO1O14980 1071 aaKnown RBP15.74■□□□□ 0.11
CHD1L-205ENST00000467213 PTPN3P26045 913 aa15.74■□□□□ 0.11
CHD1L-205ENST00000467213 ZNF33AQ06730 810 aa15.74■□□□□ 0.11
CHD1L-205ENST00000467213 DLG2Q15700 870 aa15.74■□□□□ 0.11
CHD1L-205ENST00000467213 NXNQ6DKJ4 435 aa15.74■□□□□ 0.11
CHD1L-205ENST00000467213 ITPRIPL1Q6GPH6 555 aa15.74■□□□□ 0.11
CHD1L-205ENST00000467213 SPRED1Q7Z699 444 aa15.74■□□□□ 0.11
CHD1L-205ENST00000467213 DHFR2Q86XF0 187 aa15.74■□□□□ 0.11
CHD1L-205ENST00000467213 ANKRD13AQ8IZ07 590 aa15.74■□□□□ 0.11
CHD1L-205ENST00000467213 CENPLQ8N0S6 344 aaPredicted RBP15.74■□□□□ 0.11
CHD1L-205ENST00000467213 MYO1HQ8N1T3 1032 aa15.74■□□□□ 0.11
CHD1L-205ENST00000467213 FAM47BQ8NA70 645 aa15.74■□□□□ 0.11
CHD1L-205ENST00000467213 DDHD1Q8NEL9 900 aa15.74■□□□□ 0.11
CHD1L-205ENST00000467213 TBC1D15Q8TC07 691 aa15.74■□□□□ 0.11
CHD1L-205ENST00000467213 FEM1CQ96JP0 617 aa15.74■□□□□ 0.11
CHD1L-205ENST00000467213 EML4Q9HC35 981 aaKnown RBP15.74■□□□□ 0.11
CHD1L-205ENST00000467213 ACOT9Q9Y305 439 aa15.74■□□□□ 0.11
CHD1L-205ENST00000467213 ZNF236Q9UL36 1845 aa15.74■□□□□ 0.11
CHD1L-205ENST00000467213 KCNU1A8MYU2 1149 aa15.74■□□□□ 0.11
CHD1L-205ENST00000467213 DAB1O75553 588 aa15.74■□□□□ 0.11
CHD1L-205ENST00000467213 FCGR1AP12314 374 aa15.74■□□□□ 0.11
CHD1L-205ENST00000467213 JUNBP17275 347 aaPredicted RBP15.74■□□□□ 0.11
CHD1L-205ENST00000467213 GABRB3P28472 473 aa15.74■□□□□ 0.11
CHD1L-205ENST00000467213 MSX2P35548 267 aaPredicted RBP15.74■□□□□ 0.11
CHD1L-205ENST00000467213 ATP6V0D1P61421 351 aa15.74■□□□□ 0.11
CHD1L-205ENST00000467213 GALNT2Q10471 571 aa15.74■□□□□ 0.11
CHD1L-205ENST00000467213 BNIP2Q12982 314 aa15.74■□□□□ 0.11
CHD1L-205ENST00000467213 GRM3Q14832 879 aa15.74■□□□□ 0.11
CHD1L-205ENST00000467213 TREML2Q5T2D2 321 aa15.74■□□□□ 0.11
CHD1L-205ENST00000467213 MEX3CQ5U5Q3 659 aaKnown RBP15.74■□□□□ 0.11
CHD1L-205ENST00000467213 DCDC5Q6ZRR9 648 aa15.74■□□□□ 0.11
CHD1L-205ENST00000467213 LINC00299Q6ZSB3 139 aa15.74■□□□□ 0.11
CHD1L-205ENST00000467213 PID1Q7Z2X4 250 aa15.74■□□□□ 0.11
CHD1L-205ENST00000467213 C12orf29Q8N999 325 aa15.74■□□□□ 0.11
CHD1L-205ENST00000467213 HMGCLL1Q8TB92 370 aa15.74■□□□□ 0.11
CHD1L-205ENST00000467213 TRUB1Q8WWH5 349 aaKnown RBP15.74■□□□□ 0.11
CHD1L-205ENST00000467213 HOPXQ9BPY8 73 aaPredicted RBP15.74■□□□□ 0.11
CHD1L-205ENST00000467213 CAB39LQ9H9S4 337 aa15.74■□□□□ 0.11
CHD1L-205ENST00000467213 MAGEE1Q9HCI5 957 aa15.74■□□□□ 0.11
CHD1L-205ENST00000467213 GIN1Q9NXP7 522 aa15.74■□□□□ 0.11
CHD1L-205ENST00000467213 RUVBL2Q9Y230 463 aaKnown RBP15.74■□□□□ 0.11
CHD1L-205ENST00000467213 HSD17B1P14061 328 aa15.73■□□□□ 0.11
CHD1L-205ENST00000467213 ATP5F1P24539 256 aaPredicted RBP15.73■□□□□ 0.11
CHD1L-205ENST00000467213 TGFBIQ15582 683 aa15.73■□□□□ 0.11
CHD1L-205ENST00000467213 NIPAL1Q6NVV3 410 aa15.73■□□□□ 0.11
CHD1L-205ENST00000467213 NCCRP1Q6ZVX7 275 aaPredicted RBP15.73■□□□□ 0.11
CHD1L-205ENST00000467213 LINC00523Q86TU6 105 aa15.73■□□□□ 0.11
CHD1L-205ENST00000467213 CRYBG2Q8N1P7 616 aa15.73■□□□□ 0.11
CHD1L-205ENST00000467213 LRRC52Q8N7C0 313 aa15.73■□□□□ 0.11
CHD1L-205ENST00000467213 RNF148Q8N7C7 305 aa15.73■□□□□ 0.11
CHD1L-205ENST00000467213 PTCD2Q8WV60 388 aaKnown RBP15.73■□□□□ 0.11
CHD1L-205ENST00000467213 SEPT8Q92599 483 aa15.73■□□□□ 0.11
CHD1L-205ENST00000467213 SNX27Q96L92 541 aa15.73■□□□□ 0.11
CHD1L-205ENST00000467213 GPR20Q99678 358 aa15.73■□□□□ 0.11
CHD1L-205ENST00000467213 HNRNPABQ99729 332 aaKnown RBP15.73■□□□□ 0.11
CHD1L-205ENST00000467213 GPATCH1Q9BRR8 931 aaKnown RBP15.73■□□□□ 0.11
CHD1L-205ENST00000467213 CXorf21Q9HAI6 301 aa15.73■□□□□ 0.11
CHD1L-205ENST00000467213 PLEKHA5Q9HAU0 1116 aa15.73■□□□□ 0.11
CHD1L-205ENST00000467213 AGPAT4Q9NRZ5 378 aa15.73■□□□□ 0.11
CHD1L-205ENST00000467213 SLC38A7Q9NVC3 462 aa15.73■□□□□ 0.11
CHD1L-205ENST00000467213 ARHGEF38Q9NXL2 777 aa15.73■□□□□ 0.11
CHD1L-205ENST00000467213 EBF1Q9UH73 591 aa15.73■□□□□ 0.11
CHD1L-205ENST00000467213 CACNG3O60359 315 aa15.73■□□□□ 0.11
CHD1L-205ENST00000467213 HBP1O60381 514 aa15.73■□□□□ 0.11
CHD1L-205ENST00000467213 SRP72O76094 671 aaKnown RBP15.73■□□□□ 0.11
CHD1L-205ENST00000467213 GMPRP36959 345 aa15.73■□□□□ 0.11
CHD1L-205ENST00000467213 TMBIM6P55061 237 aa15.73■□□□□ 0.11
CHD1L-205ENST00000467213 RAB10P61026 200 aa15.73■□□□□ 0.11
CHD1L-205ENST00000467213 MERTKQ12866 999 aa15.73■□□□□ 0.11
CHD1L-205ENST00000467213 TUBA3CQ13748 450 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms