RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 CHST9Q7L1S5 443 aa18.91■□□□□ 0.62
CAPN3-209ENST00000466222 OTOP3Q7RTS5 596 aa18.91■□□□□ 0.62
CAPN3-209ENST00000466222 TBC1D1Q86TI0 1168 aaPredicted RBP18.91■□□□□ 0.62
CAPN3-209ENST00000466222 CELF5Q8N6W0 485 aaKnown RBP18.91■□□□□ 0.62
CAPN3-209ENST00000466222 ATP11CQ8NB49 1132 aa18.91■□□□□ 0.62
CAPN3-209ENST00000466222 FBF1Q8TES7 1133 aa18.91■□□□□ 0.62
CAPN3-209ENST00000466222 MSLNLQ96KJ4 702 aa18.91■□□□□ 0.62
CAPN3-209ENST00000466222 BRD8Q9H0E9 1235 aa18.91■□□□□ 0.62
CAPN3-209ENST00000466222 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.91■□□□□ 0.62
CAPN3-209ENST00000466222 MTCL1Q9Y4B5 1905 aaKnown RBP18.9■□□□□ 0.62
CAPN3-209ENST00000466222 TTC24A2A3L6 582 aaPredicted RBP18.9■□□□□ 0.62
CAPN3-209ENST00000466222 ARHGAP42A6NI28 874 aa18.9■□□□□ 0.62
CAPN3-209ENST00000466222 LUC7L3O95232 432 aaKnown RBP18.9■□□□□ 0.62
CAPN3-209ENST00000466222 ALADP13716 330 aa18.9■□□□□ 0.62
CAPN3-209ENST00000466222 KRT15P19012 456 aa18.9■□□□□ 0.62
CAPN3-209ENST00000466222 ETFBP38117 255 aa18.9■□□□□ 0.62
CAPN3-209ENST00000466222 ZKSCAN8Q15776 578 aaPredicted RBP18.9■□□□□ 0.62
CAPN3-209ENST00000466222 CCDC85BQ15834 202 aaPredicted RBP18.9■□□□□ 0.62
CAPN3-209ENST00000466222 PDK4Q16654 411 aa18.9■□□□□ 0.62
CAPN3-209ENST00000466222 HIF1AQ16665 826 aa18.9■□□□□ 0.62
CAPN3-209ENST00000466222 KLHL38Q2WGJ6 581 aa18.9■□□□□ 0.62
CAPN3-209ENST00000466222 PARP15Q460N3 678 aa18.9■□□□□ 0.62
CAPN3-209ENST00000466222 LY6G5CQ5SRR4 150 aa18.9■□□□□ 0.62
CAPN3-209ENST00000466222 CES5AQ6NT32 575 aa18.9■□□□□ 0.62
CAPN3-209ENST00000466222 CGB2Q6NT52 195 aa18.9■□□□□ 0.62
CAPN3-209ENST00000466222 MFN1Q8IWA4 741 aa18.9■□□□□ 0.62
CAPN3-209ENST00000466222 ZBED8Q8IZ13 594 aa18.9■□□□□ 0.62
CAPN3-209ENST00000466222 NAT8LQ8N9F0 302 aa18.9■□□□□ 0.62
CAPN3-209ENST00000466222 SMARCD2Q92925 531 aa18.9■□□□□ 0.62
CAPN3-209ENST00000466222 KLHL29Q96CT2 875 aa18.9■□□□□ 0.62
CAPN3-209ENST00000466222 MUC3BQ9H195 1237 aa18.9■□□□□ 0.62
CAPN3-209ENST00000466222 POMKQ9H5K3 350 aa18.9■□□□□ 0.62
CAPN3-209ENST00000466222 ARHGEF3Q9NR81 526 aa18.9■□□□□ 0.62
CAPN3-209ENST00000466222 NEDD8-MDP1E9PL57 170 aa18.9■□□□□ 0.62
CAPN3-209ENST00000466222 TRIM24O15164 1050 aa18.9■□□□□ 0.62
CAPN3-209ENST00000466222 SNAP91O60641 907 aa18.9■□□□□ 0.62
CAPN3-209ENST00000466222 BANF1O75531 89 aa18.9■□□□□ 0.62
CAPN3-209ENST00000466222 GJB3O75712 270 aa18.9■□□□□ 0.62
CAPN3-209ENST00000466222 APRTP07741 180 aa18.9■□□□□ 0.62
CAPN3-209ENST00000466222 FCARP24071 287 aa18.9■□□□□ 0.62
CAPN3-209ENST00000466222 FOXN2P32314 431 aa18.9■□□□□ 0.62
CAPN3-209ENST00000466222 CSKP41240 450 aa18.9■□□□□ 0.62
CAPN3-209ENST00000466222 GRIA1P42261 906 aa18.9■□□□□ 0.62
CAPN3-209ENST00000466222 GEMIN4P57678 1058 aaKnown RBP18.9■□□□□ 0.62
CAPN3-209ENST00000466222 YBEYP58557 167 aaPredicted RBP18.9■□□□□ 0.62
CAPN3-209ENST00000466222 PDIA2Q13087 525 aaKnown RBP18.9■□□□□ 0.62
CAPN3-209ENST00000466222 CDH18Q13634 790 aa18.9■□□□□ 0.62
CAPN3-209ENST00000466222 MPPE1Q53F39 396 aa18.9■□□□□ 0.62
CAPN3-209ENST00000466222 SPDYAQ5MJ70 313 aa18.9■□□□□ 0.62
CAPN3-209ENST00000466222 HP1BP3Q5SSJ5 553 aaPredicted RBP18.9■□□□□ 0.62
CAPN3-209ENST00000466222 TEKT5Q96M29 485 aa18.9■□□□□ 0.62
CAPN3-209ENST00000466222 SP110Q9HB58 689 aa18.9■□□□□ 0.62
CAPN3-209ENST00000466222 TXLNGQ9NUQ3 528 aa18.9■□□□□ 0.62
CAPN3-209ENST00000466222 DONSONQ9NYP3 566 aa18.9■□□□□ 0.62
CAPN3-209ENST00000466222 UBP1Q9NZI7 540 aa18.9■□□□□ 0.62
CAPN3-209ENST00000466222 CDH7Q9ULB5 785 aa18.9■□□□□ 0.62
CAPN3-209ENST00000466222 OBSL1O75147 1896 aa18.89■□□□□ 0.62
CAPN3-209ENST00000466222 ILVBLA1L0T0 632 aa18.89■□□□□ 0.61
CAPN3-209ENST00000466222 FOXO6A8MYZ6 492 aa18.89■□□□□ 0.61
CAPN3-209ENST00000466222 POC1B-GALNT4F8VUJ3 575 aa18.89■□□□□ 0.61
CAPN3-209ENST00000466222 AVILO75366 819 aa18.89■□□□□ 0.61
CAPN3-209ENST00000466222 ZWINTO95229 277 aa18.89■□□□□ 0.61
CAPN3-209ENST00000466222 NFKB1P19838 968 aa18.89■□□□□ 0.61
CAPN3-209ENST00000466222 MAXP61244 160 aa18.89■□□□□ 0.61
CAPN3-209ENST00000466222 KCNJ11Q14654 390 aa18.89■□□□□ 0.61
CAPN3-209ENST00000466222 SETDB1Q15047 1291 aa18.89■□□□□ 0.61
CAPN3-209ENST00000466222 ANO4Q32M45 955 aa18.89■□□□□ 0.61
CAPN3-209ENST00000466222 TTC39BQ5VTQ0 682 aaPredicted RBP18.89■□□□□ 0.61
CAPN3-209ENST00000466222 ASTLQ6HA08 431 aaPredicted RBP18.89■□□□□ 0.61
CAPN3-209ENST00000466222 LINGO4Q6UY18 593 aa18.89■□□□□ 0.61
CAPN3-209ENST00000466222 SETD3Q86TU7 594 aaPredicted RBP18.89■□□□□ 0.61
CAPN3-209ENST00000466222 APCDD1Q8J025 514 aa18.89■□□□□ 0.61
CAPN3-209ENST00000466222 FITM2Q8N6M3 262 aa18.89■□□□□ 0.61
CAPN3-209ENST00000466222 NAT16Q8N8M0 369 aa18.89■□□□□ 0.61
CAPN3-209ENST00000466222 IRF7Q92985 503 aa18.89■□□□□ 0.61
CAPN3-209ENST00000466222 PLA2G2FQ9BZM2 168 aa18.89■□□□□ 0.61
CAPN3-209ENST00000466222 MAGEH1Q9H213 219 aa18.89■□□□□ 0.61
CAPN3-209ENST00000466222 ATP13A1Q9HD20 1204 aa18.89■□□□□ 0.61
CAPN3-209ENST00000466222 SPHK2Q9NRA0 654 aa18.89■□□□□ 0.61
CAPN3-209ENST00000466222 RBM22Q9NW64 420 aaKnown RBP eCLIP18.89■□□□□ 0.61
CAPN3-209ENST00000466222 GDE1Q9NZC3 331 aa18.89■□□□□ 0.61
CAPN3-209ENST00000466222 BAIAP2L1Q9UHR4 511 aa18.89■□□□□ 0.61
CAPN3-209ENST00000466222 USH1CQ9Y6N9 552 aa18.89■□□□□ 0.61
CAPN3-209ENST00000466222 COL6A3P12111 3177 aa18.89■□□□□ 0.61
CAPN3-209ENST00000466222 TMEM265A0A087WTH1 108 aa18.88■□□□□ 0.61
CAPN3-209ENST00000466222 TYW5A2RUC4 315 aaKnown RBP18.88■□□□□ 0.61
CAPN3-209ENST00000466222 OTOL1A6NHN0 477 aaPredicted RBP18.88■□□□□ 0.61
CAPN3-209ENST00000466222 HEPACAM2A8MVW5 462 aa18.88■□□□□ 0.61
CAPN3-209ENST00000466222 E7ESA3 106 aa18.88■□□□□ 0.61
CAPN3-209ENST00000466222 CBX4O00257 560 aa18.88■□□□□ 0.61
CAPN3-209ENST00000466222 OPHN1O60890 802 aa18.88■□□□□ 0.61
CAPN3-209ENST00000466222 STK10O94804 968 aaKnown RBP18.88■□□□□ 0.61
CAPN3-209ENST00000466222 HLA-DQB2P05538 268 aa18.88■□□□□ 0.61
CAPN3-209ENST00000466222 POU3F3P20264 500 aaPredicted RBP18.88■□□□□ 0.61
CAPN3-209ENST00000466222 CD70P32970 193 aa18.88■□□□□ 0.61
CAPN3-209ENST00000466222 ASRGL1Q7L266 308 aa18.88■□□□□ 0.61
CAPN3-209ENST00000466222 SPATA22Q8NHS9 363 aa18.88■□□□□ 0.61
CAPN3-209ENST00000466222 ALKBH8Q96BT7 664 aaKnown RBP18.88■□□□□ 0.61
CAPN3-209ENST00000466222 IL12RB2Q99665 862 aa18.88■□□□□ 0.61
CAPN3-209ENST00000466222 FEM1AQ9BSK4 669 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms