RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 PEX11BO96011 259 aa16.09■□□□□ 0.17
ERCC3-206ENST00000462306 CD27P26842 260 aa16.09■□□□□ 0.17
ERCC3-206ENST00000462306 SERPINB6P35237 376 aa16.09■□□□□ 0.17
ERCC3-206ENST00000462306 CCR5P51681 352 aa16.09■□□□□ 0.17
ERCC3-206ENST00000462306 PAFAH1B3Q15102 231 aaKnown RBP16.09■□□□□ 0.17
ERCC3-206ENST00000462306 NCBP2-AS2Q69YL0 99 aa16.09■□□□□ 0.17
ERCC3-206ENST00000462306 ERN2Q76MJ5 926 aaKnown RBP16.09■□□□□ 0.17
ERCC3-206ENST00000462306 RYBPQ8N488 228 aaPredicted RBP16.09■□□□□ 0.17
ERCC3-206ENST00000462306 ZCCHC9Q8N567 271 aaKnown RBP16.09■□□□□ 0.17
ERCC3-206ENST00000462306 PQLC3Q8N755 202 aa16.09■□□□□ 0.17
ERCC3-206ENST00000462306 ACRBPQ8NEB7 543 aa16.09■□□□□ 0.17
ERCC3-206ENST00000462306 SNX19Q92543 992 aa16.09■□□□□ 0.17
ERCC3-206ENST00000462306 LACRTQ9GZZ8 138 aa16.09■□□□□ 0.17
ERCC3-206ENST00000462306 MIR1-1HGQ9H1L0 117 aa16.09■□□□□ 0.17
ERCC3-206ENST00000462306 GOLPH3Q9H4A6 298 aa16.09■□□□□ 0.17
ERCC3-206ENST00000462306 EBF2Q9HAK2 575 aa16.09■□□□□ 0.17
ERCC3-206ENST00000462306 SP110Q9HB58 689 aa16.09■□□□□ 0.17
ERCC3-206ENST00000462306 SLC6A14Q9UN76 642 aa16.09■□□□□ 0.17
ERCC3-206ENST00000462306 ALG6Q9Y672 507 aa16.09■□□□□ 0.17
ERCC3-206ENST00000462306 DUSP10Q9Y6W6 482 aa16.09■□□□□ 0.17
ERCC3-206ENST00000462306 TBC1D3DA0A087WVF3 549 aa16.08■□□□□ 0.16
ERCC3-206ENST00000462306 TBC1D3IA0A087WXS9 549 aa16.08■□□□□ 0.16
ERCC3-206ENST00000462306 TBC1D3EA0A087X179 549 aa16.08■□□□□ 0.16
ERCC3-206ENST00000462306 TBC1D3KA0A087X1G2 549 aa16.08■□□□□ 0.16
ERCC3-206ENST00000462306 A0A1B0GTW7 788 aa16.08■□□□□ 0.16
ERCC3-206ENST00000462306 TBC1D3FA6NER0 549 aaPredicted RBP16.08■□□□□ 0.16
ERCC3-206ENST00000462306 TBC1D3LB9A6J9 549 aa16.08■□□□□ 0.16
ERCC3-206ENST00000462306 MFSD11O43934 449 aa16.08■□□□□ 0.16
ERCC3-206ENST00000462306 MAFKO60675 156 aa16.08■□□□□ 0.16
ERCC3-206ENST00000462306 PALMO75781 387 aa16.08■□□□□ 0.16
ERCC3-206ENST00000462306 IPO7O95373 1038 aaKnown RBP16.08■□□□□ 0.16
ERCC3-206ENST00000462306 IGSF6O95976 241 aa16.08■□□□□ 0.16
ERCC3-206ENST00000462306 CFIP05156 583 aa16.08■□□□□ 0.16
ERCC3-206ENST00000462306 TBC1D3HP0C7X1 549 aa16.08■□□□□ 0.16
ERCC3-206ENST00000462306 GNSP15586 552 aa16.08■□□□□ 0.16
ERCC3-206ENST00000462306 ITGB7P26010 798 aa16.08■□□□□ 0.16
ERCC3-206ENST00000462306 PI4KAP42356 2102 aa16.08■□□□□ 0.16
ERCC3-206ENST00000462306 RGRP47804 291 aa16.08■□□□□ 0.16
ERCC3-206ENST00000462306 PPP2CBP62714 309 aa16.08■□□□□ 0.16
ERCC3-206ENST00000462306 PPP2CAP67775 309 aa16.08■□□□□ 0.16
ERCC3-206ENST00000462306 RFTN1Q14699 578 aaPredicted RBP16.08■□□□□ 0.16
ERCC3-206ENST00000462306 RSPO4Q2I0M5 234 aaPredicted RBP16.08■□□□□ 0.16
ERCC3-206ENST00000462306 TBC1D3GQ6DHY5 549 aa16.08■□□□□ 0.16
ERCC3-206ENST00000462306 TBC1D3CQ6IPX1 549 aa16.08■□□□□ 0.16
ERCC3-206ENST00000462306 RHOT1Q8IXI2 618 aa16.08■□□□□ 0.16
ERCC3-206ENST00000462306 TBC1D3Q8IZP1 549 aaPredicted RBP16.08■□□□□ 0.16
ERCC3-206ENST00000462306 NETO1Q8TDF5 533 aa16.08■□□□□ 0.16
ERCC3-206ENST00000462306 RMDN1Q96DB5 314 aa16.08■□□□□ 0.16
ERCC3-206ENST00000462306 PPP1R16AQ96I34 528 aa16.08■□□□□ 0.16
ERCC3-206ENST00000462306 EXOC2Q96KP1 924 aa16.08■□□□□ 0.16
ERCC3-206ENST00000462306 ZNF599Q96NL3 588 aa16.08■□□□□ 0.16
ERCC3-206ENST00000462306 RNF157Q96PX1 679 aa16.08■□□□□ 0.16
ERCC3-206ENST00000462306 NUSAP1Q9BXS6 441 aaKnown RBP16.08■□□□□ 0.16
ERCC3-206ENST00000462306 FSCN3Q9NQT6 498 aa16.08■□□□□ 0.16
ERCC3-206ENST00000462306 DYRK4Q9NR20 520 aa16.08■□□□□ 0.16
ERCC3-206ENST00000462306 DMXL1Q9Y485 3027 aa16.08■□□□□ 0.16
ERCC3-206ENST00000462306 SPTBN4Q9H254 2564 aa16.08■□□□□ 0.16
ERCC3-206ENST00000462306 A0A1W2PPC4 97 aa16.07■□□□□ 0.16
ERCC3-206ENST00000462306 LRRD1A4D1F6 860 aa16.07■□□□□ 0.16
ERCC3-206ENST00000462306 BTNL10A8MVZ5 291 aa16.07■□□□□ 0.16
ERCC3-206ENST00000462306 ZNF487B1APH4 448 aa16.07■□□□□ 0.16
ERCC3-206ENST00000462306 CDX4O14627 284 aaPredicted RBP16.07■□□□□ 0.16
ERCC3-206ENST00000462306 MUSKO15146 869 aa16.07■□□□□ 0.16
ERCC3-206ENST00000462306 BCAT2O15382 392 aaPredicted RBP16.07■□□□□ 0.16
ERCC3-206ENST00000462306 INSIG1O15503 277 aa16.07■□□□□ 0.16
ERCC3-206ENST00000462306 PJA2O43164 708 aa16.07■□□□□ 0.16
ERCC3-206ENST00000462306 LATO43561 262 aa16.07■□□□□ 0.16
ERCC3-206ENST00000462306 SPOPO43791 374 aa16.07■□□□□ 0.16
ERCC3-206ENST00000462306 UGT2B4P06133 528 aa16.07■□□□□ 0.16
ERCC3-206ENST00000462306 ENGP17813 658 aa16.07■□□□□ 0.16
ERCC3-206ENST00000462306 NEK3P51956 506 aa16.07■□□□□ 0.16
ERCC3-206ENST00000462306 VAV2P52735 878 aa16.07■□□□□ 0.16
ERCC3-206ENST00000462306 LIMK1P53667 647 aa16.07■□□□□ 0.16
ERCC3-206ENST00000462306 SLC10A7Q0GE19 358 aa16.07■□□□□ 0.16
ERCC3-206ENST00000462306 CCDC15Q0P6D6 951 aa16.07■□□□□ 0.16
ERCC3-206ENST00000462306 ZNF805Q5CZA5 627 aa16.07■□□□□ 0.16
ERCC3-206ENST00000462306 ZFYVE27Q5T4F4 411 aa16.07■□□□□ 0.16
ERCC3-206ENST00000462306 C11orf63Q6NUN7 778 aa16.07■□□□□ 0.16
ERCC3-206ENST00000462306 PARS2Q7L3T8 475 aaKnown RBP16.07■□□□□ 0.16
ERCC3-206ENST00000462306 VSIG1Q86XK7 387 aa16.07■□□□□ 0.16
ERCC3-206ENST00000462306 TSEN2Q8NCE0 465 aaKnown RBP16.07■□□□□ 0.16
ERCC3-206ENST00000462306 TPCN2Q8NHX9 752 aa16.07■□□□□ 0.16
ERCC3-206ENST00000462306 EDEM2Q9BV94 578 aa16.07■□□□□ 0.16
ERCC3-206ENST00000462306 OSBPL1AQ9BXW6 950 aa16.07■□□□□ 0.16
ERCC3-206ENST00000462306 CPEB1Q9BZB8 566 aaKnown RBP16.07■□□□□ 0.16
ERCC3-206ENST00000462306 PREBQ9HCU5 417 aa16.07■□□□□ 0.16
ERCC3-206ENST00000462306 DLL3Q9NYJ7 618 aa16.07■□□□□ 0.16
ERCC3-206ENST00000462306 PCDH15Q96QU1 1955 aa16.07■□□□□ 0.16
ERCC3-206ENST00000462306 C16orf96A6NNT2 1141 aa16.06■□□□□ 0.16
ERCC3-206ENST00000462306 GOLGA6L6A8MZA4 724 aa16.06■□□□□ 0.16
ERCC3-206ENST00000462306 KRT1P04264 644 aa16.06■□□□□ 0.16
ERCC3-206ENST00000462306 TNNT1P13805 278 aa16.06■□□□□ 0.16
ERCC3-206ENST00000462306 ADRB3P13945 408 aa16.06■□□□□ 0.16
ERCC3-206ENST00000462306 CSNK1DP48730 415 aa16.06■□□□□ 0.16
ERCC3-206ENST00000462306 GSDMDP57764 484 aa16.06■□□□□ 0.16
ERCC3-206ENST00000462306 RAD51Q06609 339 aa16.06■□□□□ 0.16
ERCC3-206ENST00000462306 NSUN2Q08J23 767 aaKnown RBP eCLIP16.06■□□□□ 0.16
ERCC3-206ENST00000462306 GALNT2Q10471 571 aa16.06■□□□□ 0.16
ERCC3-206ENST00000462306 SLC10A2Q12908 348 aaPredicted RBP16.06■□□□□ 0.16
ERCC3-206ENST00000462306 LBRQ14739 615 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms