RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 HNRNPLP14866 589 aaKnown RBP eCLIP18.67■□□□□ 0.58
HPS3-204ENST00000462030 EPHX2P34913 555 aa18.67■□□□□ 0.58
HPS3-204ENST00000462030 TMED1Q13445 227 aa18.67■□□□□ 0.58
HPS3-204ENST00000462030 HMBOX1Q6NT76 420 aa18.67■□□□□ 0.58
HPS3-204ENST00000462030 CNSTQ6PJW8 725 aa18.67■□□□□ 0.58
HPS3-204ENST00000462030 MAMDC4Q6UXC1 1216 aa18.67■□□□□ 0.58
HPS3-204ENST00000462030 DLK2Q6UY11 383 aa18.67■□□□□ 0.58
HPS3-204ENST00000462030 HERC6Q8IVU3 1022 aa18.67■□□□□ 0.58
HPS3-204ENST00000462030 TXNDC5Q8NBS9 432 aaKnown RBP18.67■□□□□ 0.58
HPS3-204ENST00000462030 TRPM4Q8TD43 1214 aa18.67■□□□□ 0.58
HPS3-204ENST00000462030 OSBPL2Q9H1P3 480 aa18.67■□□□□ 0.58
HPS3-204ENST00000462030 TRPC7Q9HCX4 862 aa18.67■□□□□ 0.58
HPS3-204ENST00000462030 OLAHQ9NV23 265 aa18.67■□□□□ 0.58
HPS3-204ENST00000462030 GINS2Q9Y248 185 aa18.67■□□□□ 0.58
HPS3-204ENST00000462030 PCNTO95613 3336 aa18.67■□□□□ 0.58
HPS3-204ENST00000462030 MAGEB16A2A368 324 aa18.67■□□□□ 0.58
HPS3-204ENST00000462030 PRORSD1PA6NEY8 169 aa18.67■□□□□ 0.58
HPS3-204ENST00000462030 NEMP2A6NFY4 417 aa18.67■□□□□ 0.58
HPS3-204ENST00000462030 H3BNH8 94 aa18.67■□□□□ 0.58
HPS3-204ENST00000462030 FBP2O00757 339 aa18.67■□□□□ 0.58
HPS3-204ENST00000462030 HADHAP40939 763 aa18.67■□□□□ 0.58
HPS3-204ENST00000462030 NDST2P52849 883 aa18.67■□□□□ 0.58
HPS3-204ENST00000462030 RABGGTBP53611 331 aa18.67■□□□□ 0.58
HPS3-204ENST00000462030 TPI1P60174 286 aa18.67■□□□□ 0.58
HPS3-204ENST00000462030 RHDQ02161 417 aa18.67■□□□□ 0.58
HPS3-204ENST00000462030 CTBP1Q13363 440 aa18.67■□□□□ 0.58
HPS3-204ENST00000462030 LPIN1Q14693 890 aa18.67■□□□□ 0.58
HPS3-204ENST00000462030 LPCAT2Q7L5N7 544 aa18.67■□□□□ 0.58
HPS3-204ENST00000462030 WNT8BQ93098 351 aa18.67■□□□□ 0.58
HPS3-204ENST00000462030 OSBPL11Q9BXB4 747 aa18.67■□□□□ 0.58
HPS3-204ENST00000462030 SNX25Q9H3E2 840 aa18.67■□□□□ 0.58
HPS3-204ENST00000462030 TXNRD2Q9NNW7 524 aa18.67■□□□□ 0.58
HPS3-204ENST00000462030 CACNA2D2Q9NY47 1150 aa18.67■□□□□ 0.58
HPS3-204ENST00000462030 UTP6Q9NYH9 597 aaKnown RBP18.67■□□□□ 0.58
HPS3-204ENST00000462030 ACOT9Q9Y305 439 aa18.67■□□□□ 0.58
HPS3-204ENST00000462030 TNS1Q9HBL0 1735 aaKnown RBP18.67■□□□□ 0.58
HPS3-204ENST00000462030 ERI2A8K979 691 aaKnown RBP18.66■□□□□ 0.58
HPS3-204ENST00000462030 TRIM24O15164 1050 aa18.66■□□□□ 0.58
HPS3-204ENST00000462030 RPL10P27635 214 aaKnown RBP18.66■□□□□ 0.58
HPS3-204ENST00000462030 CDK9P50750 372 aaKnown RBP18.66■□□□□ 0.58
HPS3-204ENST00000462030 CDH15P55291 814 aa18.66■□□□□ 0.58
HPS3-204ENST00000462030 LRP8Q14114 963 aa18.66■□□□□ 0.58
HPS3-204ENST00000462030 REP15Q6BDI9 236 aa18.66■□□□□ 0.58
HPS3-204ENST00000462030 DIS3LQ8TF46 1054 aaKnown RBP18.66■□□□□ 0.58
HPS3-204ENST00000462030 FTHL17Q9BXU8 183 aa18.66■□□□□ 0.58
HPS3-204ENST00000462030 DNAI2Q9GZS0 605 aa18.66■□□□□ 0.58
HPS3-204ENST00000462030 UNC93B1Q9H1C4 597 aa18.66■□□□□ 0.58
HPS3-204ENST00000462030 PPP1R1BQ9UD71 204 aaPredicted RBP18.66■□□□□ 0.58
HPS3-204ENST00000462030 STAP1Q9ULZ2 295 aa18.66■□□□□ 0.58
HPS3-204ENST00000462030 CROCCQ5TZA2 2017 aa18.66■□□□□ 0.58
HPS3-204ENST00000462030 H0YJX3 145 aa18.66■□□□□ 0.58
HPS3-204ENST00000462030 ADRA1BP35368 520 aa18.66■□□□□ 0.58
HPS3-204ENST00000462030 PSMD8P48556 350 aa18.66■□□□□ 0.58
HPS3-204ENST00000462030 ARHGAP1Q07960 439 aa18.66■□□□□ 0.58
HPS3-204ENST00000462030 FBXO47Q5MNV8 452 aa18.66■□□□□ 0.58
HPS3-204ENST00000462030 KRT80Q6KB66 452 aa18.66■□□□□ 0.58
HPS3-204ENST00000462030 DUS1LQ6P1R4 473 aaKnown RBP18.66■□□□□ 0.58
HPS3-204ENST00000462030 RPS27LQ71UM5 84 aaKnown RBP18.66■□□□□ 0.58
HPS3-204ENST00000462030 ERI1Q8IV48 349 aaKnown RBP18.66■□□□□ 0.58
HPS3-204ENST00000462030 FAM110BQ8TC76 370 aa18.66■□□□□ 0.58
HPS3-204ENST00000462030 POMKQ9H5K3 350 aa18.66■□□□□ 0.58
HPS3-204ENST00000462030 NOL11Q9H8H0 719 aaKnown RBP18.66■□□□□ 0.58
HPS3-204ENST00000462030 PLEKHA5Q9HAU0 1116 aa18.66■□□□□ 0.58
HPS3-204ENST00000462030 TNFRSF12AQ9NP84 129 aa18.66■□□□□ 0.58
HPS3-204ENST00000462030 MYRFQ9Y2G1 1151 aa18.66■□□□□ 0.58
HPS3-204ENST00000462030 DERAQ9Y315 318 aa18.66■□□□□ 0.58
HPS3-204ENST00000462030 SNX10Q9Y5X0 201 aa18.66■□□□□ 0.58
HPS3-204ENST00000462030 TRPC5OSA6NMA1 111 aa18.65■□□□□ 0.58
HPS3-204ENST00000462030 HOXA11P31270 313 aaPredicted RBP18.65■□□□□ 0.58
HPS3-204ENST00000462030 RAB10P61026 200 aa18.65■□□□□ 0.58
HPS3-204ENST00000462030 SULT2A1Q06520 285 aa18.65■□□□□ 0.58
HPS3-204ENST00000462030 TMEM62Q0P6H9 643 aa18.65■□□□□ 0.58
HPS3-204ENST00000462030 TTLL4Q14679 1199 aa18.65■□□□□ 0.58
HPS3-204ENST00000462030 PPP1R3AQ16821 1122 aa18.65■□□□□ 0.58
HPS3-204ENST00000462030 SPPL2BQ8TCT7 592 aa18.65■□□□□ 0.58
HPS3-204ENST00000462030 HSPBAP1Q96EW2 488 aa18.65■□□□□ 0.58
HPS3-204ENST00000462030 CCDC167Q9P0B6 97 aa18.65■□□□□ 0.58
HPS3-204ENST00000462030 PIM2Q9P1W9 311 aa18.65■□□□□ 0.58
HPS3-204ENST00000462030 GMPR2Q9P2T1 348 aaKnown RBP18.65■□□□□ 0.58
HPS3-204ENST00000462030 CNOT6Q9ULM6 557 aaKnown RBP18.65■□□□□ 0.58
HPS3-204ENST00000462030 TLL2Q9Y6L7 1015 aa18.65■□□□□ 0.58
HPS3-204ENST00000462030 MYLKQ15746 1914 aa18.65■□□□□ 0.58
HPS3-204ENST00000462030 FAM95CA0A1B0GW59 222 aa18.65■□□□□ 0.58
HPS3-204ENST00000462030 HEATR9A2RTY3 570 aa18.65■□□□□ 0.58
HPS3-204ENST00000462030 USP2O75604 605 aaPredicted RBP18.65■□□□□ 0.58
HPS3-204ENST00000462030 CYP2C9P11712 490 aa18.65■□□□□ 0.58
HPS3-204ENST00000462030 CKMT2P17540 419 aa18.65■□□□□ 0.58
HPS3-204ENST00000462030 CDH17Q12864 832 aa18.65■□□□□ 0.58
HPS3-204ENST00000462030 SEMA3BQ13214 749 aa18.65■□□□□ 0.58
HPS3-204ENST00000462030 DCAF4L1Q3SXM0 396 aa18.65■□□□□ 0.58
HPS3-204ENST00000462030 ZNF280DQ6N043 979 aa18.65■□□□□ 0.58
HPS3-204ENST00000462030 POTEHQ6S545 545 aa18.65■□□□□ 0.58
HPS3-204ENST00000462030 LAYNQ6UX15 382 aa18.65■□□□□ 0.58
HPS3-204ENST00000462030 PDZD4Q76G19 769 aaPredicted RBP18.65■□□□□ 0.58
HPS3-204ENST00000462030 OTOP3Q7RTS5 596 aa18.65■□□□□ 0.58
HPS3-204ENST00000462030 LZICQ8WZA0 190 aa18.65■□□□□ 0.58
HPS3-204ENST00000462030 RMND5BQ96G75 393 aaPredicted RBP18.65■□□□□ 0.58
HPS3-204ENST00000462030 KIFC1Q9BW19 673 aa18.65■□□□□ 0.58
HPS3-204ENST00000462030 NXF3Q9H4D5 531 aaKnown RBP18.65■□□□□ 0.58
HPS3-204ENST00000462030 GOLGA2P5Q9HBQ8 144 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms