RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 NFS1Q9Y697 457 aa9.1□□□□□ -0.95
VPS50-207ENST00000458530 ZFP37Q9Y6Q3 630 aaPredicted RBP9.1□□□□□ -0.95
VPS50-207ENST00000458530 DENND4AQ7Z401 1863 aa9.1□□□□□ -0.95
VPS50-207ENST00000458530 DOCK6Q96HP0 2047 aa9.1□□□□□ -0.95
VPS50-207ENST00000458530 NOTCH4Q99466 2003 aa9.1□□□□□ -0.95
VPS50-207ENST00000458530 FANCMQ8IYD8 2048 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 GOLGA6L7A0A1B0GV03 622 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 SDR42E2A6NKP2 422 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 H3BQF6 201 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 SLC9A3R1O14745 358 aaPredicted RBP9.09□□□□□ -0.95
VPS50-207ENST00000458530 ZBTB24O43167 697 aaPredicted RBP9.09□□□□□ -0.95
VPS50-207ENST00000458530 PRAMEF11O60813 436 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 CNTN5O94779 1100 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 SUN1O94901 812 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 SYF2O95926 243 aaKnown RBP9.09□□□□□ -0.95
VPS50-207ENST00000458530 AGTP01019 485 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 LMNAP02545 664 aaKnown RBP9.09□□□□□ -0.95
VPS50-207ENST00000458530 TCF3P15923 654 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 EPCAMP16422 314 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 NFKB1P19838 968 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 CES1P23141 567 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 SP100P23497 879 aaPredicted RBP9.09□□□□□ -0.95
VPS50-207ENST00000458530 SLC6A4P31645 630 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 MTHFRP42898 656 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 MAGEA3P43357 314 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 MMP13P45452 471 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 NRLP54845 237 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 TNK2Q07912 1038 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 ZBTB17Q13105 803 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 MPP3Q13368 585 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 CDH18Q13634 790 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 SLC14A2Q15849 920 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 MPPE1Q53F39 396 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 MPP7Q5T2T1 576 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 IL31Q6EBC2 164 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 RFWD3Q6PCD5 774 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 Q6ZNB5 142 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 ANKMY2Q8IV38 441 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 FBXO36Q8NEA4 188 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 SHKBP1Q8TBC3 707 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 DEPDC1BQ8WUY9 529 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 OTUB2Q96DC9 234 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 TMA16Q96EY4 203 aaKnown RBP9.09□□□□□ -0.95
VPS50-207ENST00000458530 CNTNAP3BQ96NU0 1288 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 FSD1LQ9BXM9 530 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 CNTNAP3Q9BZ76 1288 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 EPB41L4BQ9H329 900 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 NOL6Q9H6R4 1146 aaKnown RBP9.09□□□□□ -0.95
VPS50-207ENST00000458530 GLOD4Q9HC38 313 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 VPS45Q9NRW7 570 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 GKN1Q9NS71 199 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 RBM22Q9NW64 420 aaKnown RBP eCLIP9.09□□□□□ -0.95
VPS50-207ENST00000458530 VPS18Q9P253 973 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 CFAP97Q9P2B7 532 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 TBC1D14Q9P2M4 693 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 ZNF212Q9UDV6 495 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 ZC3H7BQ9UGR2 993 aaKnown RBP9.09□□□□□ -0.95
VPS50-207ENST00000458530 SLC24A2Q9UI40 661 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 CHMP2BQ9UQN3 213 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 TBC1D30Q9Y2I9 924 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 TTLL3Q9Y4R7 772 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.09□□□□□ -0.95
VPS50-207ENST00000458530 TEX264Q9Y6I9 313 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 IKBKGQ9Y6K9 419 aa9.09□□□□□ -0.95
VPS50-207ENST00000458530 TCRBV7S3A2A0A539 114 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 MAGEB16A2A368 324 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 H0Y626 953 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 LEFTY2O00292 366 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 TRDMT1O14717 391 aaKnown RBP9.08□□□□□ -0.96
VPS50-207ENST00000458530 CACNG3O60359 315 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 TBL1XO60907 577 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 LUC7L3O95232 432 aaKnown RBP9.08□□□□□ -0.96
VPS50-207ENST00000458530 KLKB1P03952 638 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 PGAM1P18669 254 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 CA4P22748 312 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 ELK3P41970 407 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 NPY2RP49146 381 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 RPS24P62847 133 aaKnown RBP9.08□□□□□ -0.96
VPS50-207ENST00000458530 CDH17Q12864 832 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 NAB1Q13506 487 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 SLC12A1Q13621 1099 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 LAMB3Q13751 1172 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 LBRQ14739 615 aaKnown RBP9.08□□□□□ -0.96
VPS50-207ENST00000458530 RASA2Q15283 850 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 KCTD19Q17RG1 926 aaPredicted RBP9.08□□□□□ -0.96
VPS50-207ENST00000458530 FNBP1LQ5T0N5 605 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 ARTNQ5T4W7 220 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 CASC4Q6P4E1 433 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 ZNF449Q6P9G9 518 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 C3orf62Q6ZUJ4 267 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 CAND1Q86VP6 1230 aaKnown RBP9.08□□□□□ -0.96
VPS50-207ENST00000458530 TDRPQ86YL5 185 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 TP53INP2Q8IXH6 220 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 KLHDC8BQ8IXV7 354 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 CMTM8Q8IZV2 173 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 CFAP52Q8N1V2 620 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 TEX26Q8N6G2 289 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 DNAAF3Q8N9W5 541 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 TDRD5Q8NAT2 981 aaKnown RBP9.08□□□□□ -0.96
VPS50-207ENST00000458530 NETO2Q8NC67 525 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms