RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 ARHGEF26Q96DR7 871 aa18.17■□□□□ 0.5
MSH6-207ENST00000456246 GDAP1L1Q96MZ0 367 aa18.17■□□□□ 0.5
MSH6-207ENST00000456246 MAGEB5Q9BZ81 275 aa18.17■□□□□ 0.5
MSH6-207ENST00000456246 CNOT8Q9UFF9 292 aaKnown RBP18.17■□□□□ 0.5
MSH6-207ENST00000456246 AP4E1Q9UPM8 1137 aa18.17■□□□□ 0.5
MSH6-207ENST00000456246 RASA4BC9J798 803 aa18.16■□□□□ 0.5
MSH6-207ENST00000456246 ATMINO43313 823 aaPredicted RBP18.16■□□□□ 0.5
MSH6-207ENST00000456246 RASA4O43374 803 aa18.16■□□□□ 0.5
MSH6-207ENST00000456246 PRPSAP2O60256 369 aa18.16■□□□□ 0.5
MSH6-207ENST00000456246 TMCC1O94876 653 aa18.16■□□□□ 0.5
MSH6-207ENST00000456246 IGSF6O95976 241 aa18.16■□□□□ 0.5
MSH6-207ENST00000456246 TPM3P06753 285 aa18.16■□□□□ 0.5
MSH6-207ENST00000456246 ITGAVP06756 1048 aa18.16■□□□□ 0.5
MSH6-207ENST00000456246 SPINK2P20155 84 aa18.16■□□□□ 0.5
MSH6-207ENST00000456246 EPHA8P29322 1005 aaPredicted RBP18.16■□□□□ 0.5
MSH6-207ENST00000456246 PBX1P40424 430 aa18.16■□□□□ 0.5
MSH6-207ENST00000456246 NDST2P52849 883 aa18.16■□□□□ 0.5
MSH6-207ENST00000456246 RPS21P63220 83 aaKnown RBP18.16■□□□□ 0.5
MSH6-207ENST00000456246 ZBED6P86452 979 aa18.16■□□□□ 0.5
MSH6-207ENST00000456246 SERINC3Q13530 473 aa18.16■□□□□ 0.5
MSH6-207ENST00000456246 ZNF805Q5CZA5 627 aa18.16■□□□□ 0.5
MSH6-207ENST00000456246 ERMARDQ5T6L9 678 aa18.16■□□□□ 0.5
MSH6-207ENST00000456246 KLHDC7BQ96G42 594 aa18.16■□□□□ 0.5
MSH6-207ENST00000456246 FEM1CQ96JP0 617 aa18.16■□□□□ 0.5
MSH6-207ENST00000456246 ISCUQ9H1K1 167 aa18.16■□□□□ 0.5
MSH6-207ENST00000456246 NOL6Q9H6R4 1146 aaKnown RBP18.16■□□□□ 0.5
MSH6-207ENST00000456246 FTSJ1Q9UET6 329 aa18.16■□□□□ 0.5
MSH6-207ENST00000456246 BTBD3Q9Y2F9 522 aa18.16■□□□□ 0.5
MSH6-207ENST00000456246 COL5A1P20908 1838 aaPredicted RBP18.16■□□□□ 0.5
MSH6-207ENST00000456246 USP24Q9UPU5 2620 aa18.16■□□□□ 0.5
MSH6-207ENST00000456246 EEF2KO00418 725 aaKnown RBP18.15■□□□□ 0.5
MSH6-207ENST00000456246 KRIT1O00522 736 aa18.15■□□□□ 0.5
MSH6-207ENST00000456246 TSPAN6O43657 245 aa18.15■□□□□ 0.5
MSH6-207ENST00000456246 TOP3BO95985 862 aaKnown RBP18.15■□□□□ 0.5
MSH6-207ENST00000456246 IL9RQ01113 521 aa18.15■□□□□ 0.5
MSH6-207ENST00000456246 MYLK3Q32MK0 819 aa18.15■□□□□ 0.5
MSH6-207ENST00000456246 TMEM259Q4ZIN3 620 aa18.15■□□□□ 0.5
MSH6-207ENST00000456246 PARS2Q7L3T8 475 aaKnown RBP18.15■□□□□ 0.5
MSH6-207ENST00000456246 CHCHD4Q8N4Q1 142 aa18.15■□□□□ 0.5
MSH6-207ENST00000456246 SAP25Q8TEE9 199 aa18.15■□□□□ 0.5
MSH6-207ENST00000456246 GATA6Q92908 595 aa18.15■□□□□ 0.5
MSH6-207ENST00000456246 HMCESQ96FZ2 354 aa18.15■□□□□ 0.5
MSH6-207ENST00000456246 TMEM121BQ9BXQ6 578 aaPredicted RBP18.15■□□□□ 0.5
MSH6-207ENST00000456246 DHX35Q9H5Z1 703 aaKnown RBP18.15■□□□□ 0.5
MSH6-207ENST00000456246 MFHAS1Q9Y4C4 1052 aa18.15■□□□□ 0.5
MSH6-207ENST00000456246 FADS3Q9Y5Q0 445 aa18.15■□□□□ 0.5
MSH6-207ENST00000456246 ACTL7AQ9Y615 435 aa18.15■□□□□ 0.5
MSH6-207ENST00000456246 KMT2BQ9UMN6 2715 aaPredicted RBP18.14■□□□□ 0.49
MSH6-207ENST00000456246 SLC31A1O15431 190 aa18.14■□□□□ 0.49
MSH6-207ENST00000456246 DKK1O94907 266 aa18.14■□□□□ 0.49
MSH6-207ENST00000456246 SERPING1P05155 500 aa18.14■□□□□ 0.49
MSH6-207ENST00000456246 PRLRP16471 622 aa18.14■□□□□ 0.49
MSH6-207ENST00000456246 PCK1P35558 622 aa18.14■□□□□ 0.49
MSH6-207ENST00000456246 RHOAP61586 193 aa18.14■□□□□ 0.49
MSH6-207ENST00000456246 GRM3Q14832 879 aa18.14■□□□□ 0.49
MSH6-207ENST00000456246 ZSCAN23Q3MJ62 389 aa18.14■□□□□ 0.49
MSH6-207ENST00000456246 DCP2Q8IU60 420 aaKnown RBP18.14■□□□□ 0.49
MSH6-207ENST00000456246 SNRNP25Q9BV90 132 aaKnown RBP18.14■□□□□ 0.49
MSH6-207ENST00000456246 LRRC19Q9H756 370 aa18.14■□□□□ 0.49
MSH6-207ENST00000456246 KLK13Q9UKR3 277 aa18.14■□□□□ 0.49
MSH6-207ENST00000456246 CAPN11Q9UMQ6 739 aa18.14■□□□□ 0.49
MSH6-207ENST00000456246 LUC7L2Q9Y383 392 aaKnown RBP18.14■□□□□ 0.49
MSH6-207ENST00000456246 TRPM6Q9BX84 2022 aa18.14■□□□□ 0.49
MSH6-207ENST00000456246 IGF2RP11717 2491 aa18.14■□□□□ 0.49
MSH6-207ENST00000456246 ARHGAP42A6NI28 874 aa18.13■□□□□ 0.49
MSH6-207ENST00000456246 C16orf96A6NNT2 1141 aa18.13■□□□□ 0.49
MSH6-207ENST00000456246 C1QTNF9BB2RNN3 333 aa18.13■□□□□ 0.49
MSH6-207ENST00000456246 RNF103O00237 685 aa18.13■□□□□ 0.49
MSH6-207ENST00000456246 DAPK3O43293 454 aa18.13■□□□□ 0.49
MSH6-207ENST00000456246 LRCH4O75427 683 aa18.13■□□□□ 0.49
MSH6-207ENST00000456246 C1QTNF9P0C862 333 aa18.13■□□□□ 0.49
MSH6-207ENST00000456246 CDK4P11802 303 aa18.13■□□□□ 0.49
MSH6-207ENST00000456246 SKILP12757 684 aa18.13■□□□□ 0.49
MSH6-207ENST00000456246 MIPP30301 263 aa18.13■□□□□ 0.49
MSH6-207ENST00000456246 SHBQ15464 509 aa18.13■□□□□ 0.49
MSH6-207ENST00000456246 HGSNATQ68CP4 663 aa18.13■□□□□ 0.49
MSH6-207ENST00000456246 GDPD4Q6W3E5 623 aa18.13■□□□□ 0.49
MSH6-207ENST00000456246 RFX8Q6ZV50 586 aa18.13■□□□□ 0.49
MSH6-207ENST00000456246 ABI3BPQ7Z7G0 1075 aa18.13■□□□□ 0.49
MSH6-207ENST00000456246 SPATS2Q86XZ4 545 aaKnown RBP18.13■□□□□ 0.49
MSH6-207ENST00000456246 KDF1Q8NAX2 398 aaPredicted RBP18.13■□□□□ 0.49
MSH6-207ENST00000456246 OR6K2Q8NGY2 324 aa18.13■□□□□ 0.49
MSH6-207ENST00000456246 ASB12Q8WXK4 309 aa18.13■□□□□ 0.49
MSH6-207ENST00000456246 IFT43Q96FT9 208 aa18.13■□□□□ 0.49
MSH6-207ENST00000456246 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.13■□□□□ 0.49
MSH6-207ENST00000456246 TOR4AQ9NXH8 423 aa18.13■□□□□ 0.49
MSH6-207ENST00000456246 UBA2Q9UBT2 640 aaPredicted RBP18.13■□□□□ 0.49
MSH6-207ENST00000456246 PCSK1NQ9UHG2 260 aa18.13■□□□□ 0.49
MSH6-207ENST00000456246 ZFR2Q9UPR6 939 aaKnown RBP18.13■□□□□ 0.49
MSH6-207ENST00000456246 PCDHGA1Q9Y5H4 931 aa18.13■□□□□ 0.49
MSH6-207ENST00000456246 HS3ST3A1Q9Y663 406 aa18.13■□□□□ 0.49
MSH6-207ENST00000456246 DOCK9Q9BZ29 2069 aa18.12■□□□□ 0.49
MSH6-207ENST00000456246 A6NNZ2 444 aa18.12■□□□□ 0.49
MSH6-207ENST00000456246 NEMP1O14524 444 aa18.12■□□□□ 0.49
MSH6-207ENST00000456246 UGT2B4P06133 528 aa18.12■□□□□ 0.49
MSH6-207ENST00000456246 ATXN1LP0C7T5 689 aaKnown RBP18.12■□□□□ 0.49
MSH6-207ENST00000456246 THEGLP0DJG4 465 aa18.12■□□□□ 0.49
MSH6-207ENST00000456246 HCAR3P49019 387 aa18.12■□□□□ 0.49
MSH6-207ENST00000456246 SUOXP51687 545 aa18.12■□□□□ 0.49
MSH6-207ENST00000456246 SGCGQ13326 291 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms