RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 GPR150Q8NGU9 434 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 STON2Q8WXE9 905 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 CCT6BQ92526 530 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 CCDC97Q96F63 343 aaPredicted RBP5.04□□□□□ -1.6
RIF1-207ENST00000454583 PWWP2AQ96N64 755 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 NUDCD1Q96RS6 583 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 FMO2Q99518 471 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 TMEM121Q9BTD3 319 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 UBE2ZQ9H832 354 aaPredicted RBP5.04□□□□□ -1.6
RIF1-207ENST00000454583 PRDM6Q9NQX0 595 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 HOMER3Q9NSC5 361 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 VPS18Q9P253 973 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 CNOT6Q9ULM6 557 aaKnown RBP5.04□□□□□ -1.6
RIF1-207ENST00000454583 STAP1Q9ULZ2 295 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 MYO10Q9HD67 2058 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 FAM159BA6NKW6 160 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 RASA4BC9J798 803 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 NCAM2O15394 837 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 ZBTB24O43167 697 aaPredicted RBP5.04□□□□□ -1.6
RIF1-207ENST00000454583 RASA4O43374 803 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 CLDN11O75508 207 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 MT-CO1P00395 513 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 AGTP01019 485 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 SLC2A3P11169 496 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 PAFAH1B1P43034 410 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 KCNJ1P48048 391 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 SLC6A11P48066 632 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 CORO7P57737 925 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 E2F2Q14209 437 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 TYSND1Q2T9J0 566 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 RABGAP1LQ5R372 815 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 ANKRD20A2Q5SQ80 823 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 ANKRD20A1Q5TYW2 823 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 ANKRD20A3Q5VUR7 823 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 RFWD3Q6PCD5 774 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 TECPR1Q7Z6L1 1165 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 SRLQ86TD4 932 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 KLHL7Q8IXQ5 586 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 KLHDC8AQ8IYD2 350 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 SIX6OS1Q8N1H7 587 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 SLC44A3Q8N4M1 653 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 NETO2Q8NC67 525 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.04□□□□□ -1.6
RIF1-207ENST00000454583 USP36Q9P275 1121 aaKnown RBP5.04□□□□□ -1.6
RIF1-207ENST00000454583 VPS51Q9UID3 782 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 PPM1HQ9ULR3 514 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 K7ESF4 209 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 FAM107AO95990 144 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 EPOP01588 193 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 SRPRAP08240 638 aaKnown RBP5.03□□□□□ -1.6
RIF1-207ENST00000454583 COL9A1P20849 921 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 USP8P40818 1118 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 VIPR2P41587 438 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 METAP1P53582 386 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 WDR4P57081 412 aaKnown RBP5.03□□□□□ -1.6
RIF1-207ENST00000454583 GNA12Q03113 381 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 EFEMP1Q12805 493 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 SEMA3AQ14563 771 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 DMC1Q14565 340 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 PPM1LQ5SGD2 360 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 RAP1GAP2Q684P5 730 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 TRABD2AQ86V40 505 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 NLRP8Q86W28 1048 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 CPAMD8Q8IZJ3 1885 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 C1orf54Q8WWF1 131 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 HTR3CQ8WXA8 447 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 PEX13Q92968 403 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 E2F7Q96AV8 911 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 GPR78Q96P69 363 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 HINFPQ9BQA5 517 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 MENTQ9BUN1 341 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 P2RY12Q9H244 342 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 ECT2Q9H8V3 914 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 CERS4Q9HA82 394 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 ENTPD7Q9NQZ7 604 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 ASAH2Q9NR71 780 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 DKK3Q9UBP4 350 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 GGT7Q9UJ14 662 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 MSRAQ9UJ68 235 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 PES1O00541 588 aaKnown RBP5.03□□□□□ -1.6
RIF1-207ENST00000454583 APOL1O14791 398 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 INSIG1O15503 277 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 FSBPO95073 299 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 IPO7O95373 1038 aaKnown RBP5.03□□□□□ -1.6
RIF1-207ENST00000454583 KRT1P04264 644 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 CHRNB1P11230 501 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 FSHRP23945 695 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 HOXA6P31267 233 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 GJA4P35212 333 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 TNFRSF4P43489 277 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 CDH6P55285 790 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 SNX16P57768 344 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 PEX6Q13608 980 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 ZKSCAN8Q15776 578 aaPredicted RBP5.03□□□□□ -1.6
RIF1-207ENST00000454583 PLEKHG6Q3KR16 790 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 PITRM1Q5JRX3 1037 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 TIFABQ6ZNK6 161 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 CCDC105Q8IYK2 499 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 CCDC26Q8TAB7 109 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 EPS8L3Q8TE67 593 aaKnown RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms