RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 GGA3Q9NZ52 723 aa17.38■□□□□ 0.37
SCUBE2-202ENST00000450649 ERGIC3Q9Y282 383 aa17.38■□□□□ 0.37
SCUBE2-202ENST00000450649 GPC6Q9Y625 555 aaPredicted RBP17.38■□□□□ 0.37
SCUBE2-202ENST00000450649 LCTP09848 1927 aa17.38■□□□□ 0.37
SCUBE2-202ENST00000450649 IGKV6-21A0A0C4DH24 114 aa17.38■□□□□ 0.37
SCUBE2-202ENST00000450649 TRIM64BA6NI03 449 aa17.38■□□□□ 0.37
SCUBE2-202ENST00000450649 CFAP99D6REC4 459 aa17.38■□□□□ 0.37
SCUBE2-202ENST00000450649 CLIC3O95833 236 aa17.38■□□□□ 0.37
SCUBE2-202ENST00000450649 GLRBP48167 497 aa17.38■□□□□ 0.37
SCUBE2-202ENST00000450649 PGGT1BP53609 377 aa17.38■□□□□ 0.37
SCUBE2-202ENST00000450649 STX5Q13190 355 aa17.38■□□□□ 0.37
SCUBE2-202ENST00000450649 NME3Q13232 169 aa17.38■□□□□ 0.37
SCUBE2-202ENST00000450649 ITGADQ13349 1161 aa17.38■□□□□ 0.37
SCUBE2-202ENST00000450649 ERMP1Q7Z2K6 904 aa17.38■□□□□ 0.37
SCUBE2-202ENST00000450649 ZNF354CQ86Y25 554 aa17.38■□□□□ 0.37
SCUBE2-202ENST00000450649 ACDQ96AP0 544 aa17.38■□□□□ 0.37
SCUBE2-202ENST00000450649 RPF1Q9H9Y2 349 aaKnown RBP17.38■□□□□ 0.37
SCUBE2-202ENST00000450649 GBA2Q9HCG7 927 aaPredicted RBP17.38■□□□□ 0.37
SCUBE2-202ENST00000450649 TRPC7Q9HCX4 862 aa17.38■□□□□ 0.37
SCUBE2-202ENST00000450649 SPAG4Q9NPE6 437 aa17.38■□□□□ 0.37
SCUBE2-202ENST00000450649 HESX1Q9UBX0 185 aa17.38■□□□□ 0.37
SCUBE2-202ENST00000450649 CD300AQ9UGN4 299 aa17.38■□□□□ 0.37
SCUBE2-202ENST00000450649 TSC22D4Q9Y3Q8 395 aa17.38■□□□□ 0.37
SCUBE2-202ENST00000450649 DOCK1Q14185 1865 aa17.38■□□□□ 0.37
SCUBE2-202ENST00000450649 SNAP91O60641 907 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 CXCL8P10145 99 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 ATXN1P54253 815 aaKnown RBP17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 GNA12Q03113 381 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 EEF1DP3Q658K8 133 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 NCBP2-AS2Q69YL0 99 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 REP15Q6BDI9 236 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 TRIM50Q86XT4 487 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 CAMK1DQ8IU85 385 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 CHST13Q8NET6 341 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 TRUB1Q8WWH5 349 aaKnown RBP17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 CSPG4P5Q96PW8 444 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 MUC3BQ9H195 1237 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 NCKIPSDQ9NZQ3 722 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 ZNF487B1APH4 448 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 RNF103O00237 685 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 CABYRO75952 493 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 APOA4P06727 396 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 GRM5P41594 1212 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 MAPK10P53779 464 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 NFATC3Q12968 1075 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 PPIL2Q13356 520 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 MAP1SQ66K74 1059 aaPredicted RBP17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 KCTD8Q6ZWB6 473 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 ZC3H7AQ8IWR0 971 aaKnown RBP17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 EXOC8Q8IYI6 725 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 LRRC71Q8N4P6 559 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 SCAIQ8N9R8 606 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 HMGCLL1Q8TB92 370 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 SCYL1Q96KG9 808 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 VRTNQ9H8Y1 702 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 SDHDO14521 159 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 NRP1O14786 923 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 NFICP08651 508 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 GRIA3P42263 894 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 DPYSL2Q16555 572 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 MAP7D1Q3KQU3 841 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 LAYNQ6UX15 382 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 DHFR2Q86XF0 187 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 EPHX4Q8IUS5 362 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 KDM1BQ8NB78 822 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 RDH11Q8TC12 318 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 CASP10Q92851 521 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 CDT1Q9H211 546 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 SEPT10Q9P0V9 454 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 GMPR2Q9P2T1 348 aaKnown RBP17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 SARDHQ9UL12 918 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 SLC39A10Q9ULF5 831 aa17.37■□□□□ 0.37
SCUBE2-202ENST00000450649 TANC1Q9C0D5 1861 aa17.36■□□□□ 0.37
SCUBE2-202ENST00000450649 SAT1P21673 171 aa17.36■□□□□ 0.37
SCUBE2-202ENST00000450649 ATICP31939 592 aa17.36■□□□□ 0.37
SCUBE2-202ENST00000450649 NEDD8Q15843 81 aa17.36■□□□□ 0.37
SCUBE2-202ENST00000450649 SLC36A3Q495N2 470 aa17.36■□□□□ 0.37
SCUBE2-202ENST00000450649 OLFML1Q6UWY5 402 aa17.36■□□□□ 0.37
SCUBE2-202ENST00000450649 TMEM192Q8IY95 271 aa17.36■□□□□ 0.37
SCUBE2-202ENST00000450649 PACRGLQ8N7B6 248 aa17.36■□□□□ 0.37
SCUBE2-202ENST00000450649 OR52K1Q8NGK4 314 aa17.36■□□□□ 0.37
SCUBE2-202ENST00000450649 CXorf38Q8TB03 319 aa17.36■□□□□ 0.37
SCUBE2-202ENST00000450649 KHSRPQ92945 711 aaKnown RBP eCLIP17.36■□□□□ 0.37
SCUBE2-202ENST00000450649 ERLEC1Q96DZ1 483 aa17.36■□□□□ 0.37
SCUBE2-202ENST00000450649 FBXL20Q96IG2 436 aa17.36■□□□□ 0.37
SCUBE2-202ENST00000450649 UPF3AQ9H1J1 476 aaKnown RBP17.36■□□□□ 0.37
SCUBE2-202ENST00000450649 ARMC1Q9NVT9 282 aa17.36■□□□□ 0.37
SCUBE2-202ENST00000450649 TSPAN16Q9UKR8 245 aa17.36■□□□□ 0.37
SCUBE2-202ENST00000450649 B4GALT5O43286 388 aa17.36■□□□□ 0.37
SCUBE2-202ENST00000450649 ITGB3P05106 788 aa17.36■□□□□ 0.37
SCUBE2-202ENST00000450649 INTS11Q5TA45 600 aaKnown RBP17.36■□□□□ 0.37
SCUBE2-202ENST00000450649 GALNT18Q6P9A2 607 aa17.36■□□□□ 0.37
SCUBE2-202ENST00000450649 METTL7BQ6UX53 244 aa17.36■□□□□ 0.37
SCUBE2-202ENST00000450649 CDR2LQ86X02 465 aaPredicted RBP17.36■□□□□ 0.37
SCUBE2-202ENST00000450649 PELI3Q8N2H9 469 aa17.36■□□□□ 0.37
SCUBE2-202ENST00000450649 CCNYL1Q8N7R7 359 aa17.36■□□□□ 0.37
SCUBE2-202ENST00000450649 CYGBQ8WWM9 190 aa17.36■□□□□ 0.37
SCUBE2-202ENST00000450649 MAELQ96JY0 434 aaKnown RBP17.36■□□□□ 0.37
SCUBE2-202ENST00000450649 KCTD15Q96SI1 283 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms