RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 SMAD6O43541 496 aaKnown RBP10.03□□□□□ -0.8
CCDC171-203ENST00000449575 RAMP2O60895 175 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 KLF8O95600 359 aaPredicted RBP10.03□□□□□ -0.8
CCDC171-203ENST00000449575 POLR2EP19388 210 aaKnown RBP10.03□□□□□ -0.8
CCDC171-203ENST00000449575 COL9A1P20849 921 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 PRKCHP24723 683 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 HSPA9P38646 679 aaKnown RBP10.03□□□□□ -0.8
CCDC171-203ENST00000449575 TNFRSF4P43489 277 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 PLK1P53350 603 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 PPP1R7Q15435 360 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 TAZQ16635 292 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 AFMIDQ63HM1 303 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 IL31Q6EBC2 164 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 KIAA1211LQ6NV74 962 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 C1orf228Q6PIY5 440 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 TMEM92Q6UXU6 159 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 CPLX4Q7Z7G2 160 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 CCDC117Q8IWD4 279 aaPredicted RBP10.03□□□□□ -0.8
CCDC171-203ENST00000449575 SYCE1Q8N0S2 351 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 CCDC63Q8NA47 563 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 TTC17Q96AE7 1141 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 LRRC45Q96CN5 670 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 NELL2Q99435 816 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 ACE2Q9BYF1 805 aaPredicted RBP10.03□□□□□ -0.8
CCDC171-203ENST00000449575 ATP13A1Q9HD20 1204 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 NFU1Q9UMS0 254 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 ERVW-1Q9UQF0 538 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 RPS6KL1Q9Y6S9 549 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 GON4LQ3T8J9 2241 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 TCRBV7S2A1N4TA0A589 114 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 TTC34A8MYJ7 566 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 SMNDC1O75940 238 aaKnown RBP eCLIP10.03□□□□□ -0.8
CCDC171-203ENST00000449575 DLDP09622 509 aaKnown RBP10.03□□□□□ -0.8
CCDC171-203ENST00000449575 NEFHP12036 1026 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 CXCR5P32302 372 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 PAPOLAP51003 745 aaKnown RBP10.03□□□□□ -0.8
CCDC171-203ENST00000449575 HIBCHQ6NVY1 386 aaPredicted RBP10.03□□□□□ -0.8
CCDC171-203ENST00000449575 DNAJC14Q6Y2X3 702 aaPredicted RBP10.03□□□□□ -0.8
CCDC171-203ENST00000449575 BMP8AQ7Z5Y6 402 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 CHPFQ8IZ52 775 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 HAUS1Q96CS2 278 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 FAM118BQ9BPY3 351 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 CHRDQ9H2X0 955 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 CNOT10Q9H9A5 744 aaKnown RBP10.03□□□□□ -0.8
CCDC171-203ENST00000449575 DDX56Q9NY93 547 aaKnown RBP10.03□□□□□ -0.8
CCDC171-203ENST00000449575 RCOR3Q9P2K3 495 aaPredicted RBP10.03□□□□□ -0.8
CCDC171-203ENST00000449575 THAP10Q9P2Z0 257 aaPredicted RBP10.03□□□□□ -0.8
CCDC171-203ENST00000449575 PLAAQ9Y263 795 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 DNAH14Q0VDD8 3507 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 ABCA7Q8IZY2 2146 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 hCG_1818297A0A087WSY0 165 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 DFFAO00273 331 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 HEXIM1O94992 359 aaKnown RBP10.03□□□□□ -0.8
CCDC171-203ENST00000449575 ANP32DO95626 131 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 FESP07332 822 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 HPDP32754 393 aaPredicted RBP10.03□□□□□ -0.8
CCDC171-203ENST00000449575 HTR7P34969 479 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 CLCN5P51795 746 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 PPP2R2AP63151 447 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 ECT2LQ008S8 904 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 SERINC3Q13530 473 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 TSSK4Q6SA08 328 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 ZNF354CQ86Y25 554 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 RFX6Q8HWS3 928 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 MAP7D3Q8IWC1 876 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 CCDC197Q8NCU1 140 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 EXD1Q8NHP7 514 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 WFIKKN2Q8TEU8 576 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 ZNF419Q96HQ0 510 aaPredicted RBP10.03□□□□□ -0.8
CCDC171-203ENST00000449575 OSBPL6Q9BZF3 934 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 SLC6A17Q9H1V8 727 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 EPB41L5Q9HCM4 733 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 HEY1Q9Y5J3 304 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 STON1Q9Y6Q2 735 aa10.03□□□□□ -0.8
CCDC171-203ENST00000449575 CACNA1HO95180 2353 aa10.02□□□□□ -0.81
CCDC171-203ENST00000449575 CCT8L1PA6NM43 557 aa10.02□□□□□ -0.81
CCDC171-203ENST00000449575 RNF103O00237 685 aa10.02□□□□□ -0.81
CCDC171-203ENST00000449575 CST8O60676 142 aa10.02□□□□□ -0.81
CCDC171-203ENST00000449575 GPR37L1O60883 481 aa10.02□□□□□ -0.81
CCDC171-203ENST00000449575 SKAP2O75563 359 aaPredicted RBP10.02□□□□□ -0.81
CCDC171-203ENST00000449575 AVPR2P30518 371 aa10.02□□□□□ -0.81
CCDC171-203ENST00000449575 PEX19P40855 299 aa10.02□□□□□ -0.81
CCDC171-203ENST00000449575 SLC12A1Q13621 1099 aa10.02□□□□□ -0.81
CCDC171-203ENST00000449575 KCTD19Q17RG1 926 aaPredicted RBP10.02□□□□□ -0.81
CCDC171-203ENST00000449575 ODF2Q5BJF6 829 aa10.02□□□□□ -0.81
CCDC171-203ENST00000449575 TFDP3Q5H9I0 405 aa10.02□□□□□ -0.81
CCDC171-203ENST00000449575 SLC9A4Q6AI14 798 aa10.02□□□□□ -0.81
CCDC171-203ENST00000449575 RCOR2Q8IZ40 523 aa10.02□□□□□ -0.81
CCDC171-203ENST00000449575 TEX9Q8N6V9 391 aa10.02□□□□□ -0.81
CCDC171-203ENST00000449575 DCAF4L2Q8NA75 395 aa10.02□□□□□ -0.81
CCDC171-203ENST00000449575 IFT81Q8WYA0 676 aa10.02□□□□□ -0.81
CCDC171-203ENST00000449575 HINFPQ9BQA5 517 aa10.02□□□□□ -0.81
CCDC171-203ENST00000449575 LRFN3Q9BTN0 628 aa10.02□□□□□ -0.81
CCDC171-203ENST00000449575 MAGEH1Q9H213 219 aa10.02□□□□□ -0.81
CCDC171-203ENST00000449575 TMEM245Q9H330 911 aa10.02□□□□□ -0.81
CCDC171-203ENST00000449575 DTLQ9NZJ0 730 aa10.02□□□□□ -0.81
CCDC171-203ENST00000449575 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.02□□□□□ -0.81
CCDC171-203ENST00000449575 A0A1W2PQF6 199 aa10.02□□□□□ -0.81
CCDC171-203ENST00000449575 ZNF821O75541 412 aaPredicted RBP10.02□□□□□ -0.81
CCDC171-203ENST00000449575 SRCP12931 536 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms