RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-238ENST00000449544 CCDC142Q17RM4 750 aa8.57□□□□□ -1.04
HCG18-238ENST00000449544 PPP1R15BQ5SWA1 713 aa8.57□□□□□ -1.04
HCG18-238ENST00000449544 CYP4X1Q8N118 509 aa8.57□□□□□ -1.04
HCG18-238ENST00000449544 ZNF516Q92618 1163 aa8.57□□□□□ -1.04
HCG18-238ENST00000449544 SGK2Q9HBY8 427 aa8.57□□□□□ -1.04
HCG18-238ENST00000449544 APPL1Q9UKG1 709 aa8.57□□□□□ -1.04
HCG18-238ENST00000449544 ILVBLA1L0T0 632 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 C9J4A7 227 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 MMP20O60882 483 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 SRP72O76094 671 aaKnown RBP8.56□□□□□ -1.04
HCG18-238ENST00000449544 KLK3P07288 261 aaPredicted RBP8.56□□□□□ -1.04
HCG18-238ENST00000449544 RHOXF2BP0C7M4 288 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 AFF3P51826 1226 aaKnown RBP8.56□□□□□ -1.04
HCG18-238ENST00000449544 ZBTB16Q05516 673 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 ITGA9Q13797 1035 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 PDE1CQ14123 709 aaPredicted RBP8.56□□□□□ -1.04
HCG18-238ENST00000449544 CENPUQ71F23 418 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 DET1Q7L5Y6 550 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 FAM71AQ8IYT1 594 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 BCL7CQ8WUZ0 217 aaPredicted RBP8.56□□□□□ -1.04
HCG18-238ENST00000449544 CASKIN2Q8WXE0 1202 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 FAM118BQ9BPY3 351 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 RHOXF2Q9BQY4 288 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 SUV39H2Q9H5I1 410 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 EXO5Q9H790 373 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 WDR41Q9HAD4 459 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 PAK5Q9P286 719 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 TPX2Q9ULW0 747 aaKnown RBP8.56□□□□□ -1.04
HCG18-238ENST00000449544 CHKBQ9Y259 395 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 MYH6P13533 1939 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 A0A0A6YYK5 440 aaPredicted RBP8.56□□□□□ -1.04
HCG18-238ENST00000449544 VNN1O95497 513 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 CCNB1P14635 433 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 TNNI3P19429 210 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 AOC1P19801 751 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 MZF1P28698 734 aaPredicted RBP8.56□□□□□ -1.04
HCG18-238ENST00000449544 CD38P28907 300 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 LIG3P49916 1009 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 AIF1P55008 147 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 MS4A13Q5J8X5 152 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 CRTC1Q6UUV9 634 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 FAM71DQ8N9W8 422 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 AVL9Q8NBF6 648 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 EXD1Q8NHP7 514 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 TRMT2BQ96GJ1 504 aaKnown RBP8.56□□□□□ -1.04
HCG18-238ENST00000449544 CDC6Q99741 560 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 ZFATQ9P243 1243 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 PCDHGC4Q9Y5F7 938 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 MYH4Q9Y623 1939 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 DCDC2BA2VCK2 349 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 POC1B-GALNT4F8VUJ3 575 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 ERBB2P04626 1255 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 GOT1P17174 413 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 TARSP26639 723 aaKnown RBP8.56□□□□□ -1.04
HCG18-238ENST00000449544 ZNF234Q14588 700 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 TAF5Q15542 800 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 SYPL2Q5VXT5 272 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 CRELD2Q6UXH1 353 aaPredicted RBP8.56□□□□□ -1.04
HCG18-238ENST00000449544 EID2Q8N6I1 236 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 CLEC4CQ8WTT0 213 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 FAM136AQ96C01 138 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 PANX2Q96RD6 677 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 CARD6Q9BX69 1037 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 AP1M1Q9BXS5 423 aa8.56□□□□□ -1.04
HCG18-238ENST00000449544 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.56□□□□□ -1.04
HCG18-238ENST00000449544 TRMT6Q9UJA5 497 aaKnown RBP8.56□□□□□ -1.04
HCG18-238ENST00000449544 MYH9P35579 1960 aaKnown RBP8.55□□□□□ -1.04
HCG18-238ENST00000449544 A0A087X0T9 212 aa8.55□□□□□ -1.04
HCG18-238ENST00000449544 PEX12O00623 359 aa8.55□□□□□ -1.04
HCG18-238ENST00000449544 SIN3BO75182 1162 aa8.55□□□□□ -1.04
HCG18-238ENST00000449544 FAM228BP0C875 321 aa8.55□□□□□ -1.04
HCG18-238ENST00000449544 ALAS2P22557 587 aa8.55□□□□□ -1.04
HCG18-238ENST00000449544 PROZP22891 400 aa8.55□□□□□ -1.04
HCG18-238ENST00000449544 DNAJB1P25685 340 aa8.55□□□□□ -1.04
HCG18-238ENST00000449544 ARSEP51690 589 aa8.55□□□□□ -1.04
HCG18-238ENST00000449544 SLC7A9P82251 487 aa8.55□□□□□ -1.04
HCG18-238ENST00000449544 HTR4Q13639 388 aa8.55□□□□□ -1.04
HCG18-238ENST00000449544 HIST2H2ACQ16777 129 aaPredicted RBP8.55□□□□□ -1.04
HCG18-238ENST00000449544 EGFLAMQ63HQ2 1017 aa8.55□□□□□ -1.04
HCG18-238ENST00000449544 HIST2H2AA3Q6FI13 130 aa8.55□□□□□ -1.04
HCG18-238ENST00000449544 C22orf39Q6P5X5 142 aa8.55□□□□□ -1.04
HCG18-238ENST00000449544 SRLQ86TD4 932 aa8.55□□□□□ -1.04
HCG18-238ENST00000449544 DNAAF5Q86Y56 855 aa8.55□□□□□ -1.04
HCG18-238ENST00000449544 SYT12Q8IV01 421 aa8.55□□□□□ -1.04
HCG18-238ENST00000449544 NCSTNQ92542 709 aa8.55□□□□□ -1.04
HCG18-238ENST00000449544 ATXN7L3BQ96GX2 97 aa8.55□□□□□ -1.04
HCG18-238ENST00000449544 FERD3LQ96RJ6 166 aa8.55□□□□□ -1.04
HCG18-238ENST00000449544 TMPRSS4Q9NRS4 437 aa8.55□□□□□ -1.04
HCG18-238ENST00000449544 DMAC2Q9NW81 257 aa8.55□□□□□ -1.04
HCG18-238ENST00000449544 ASF1AQ9Y294 204 aa8.55□□□□□ -1.04
HCG18-238ENST00000449544 PPP2R2CQ9Y2T4 447 aa8.55□□□□□ -1.04
HCG18-238ENST00000449544 DICER1Q9UPY3 1922 aaKnown RBP8.55□□□□□ -1.04
HCG18-238ENST00000449544 LTBP1Q14766 1721 aa8.55□□□□□ -1.04
HCG18-238ENST00000449544 A6NCN8 305 aa8.55□□□□□ -1.04
HCG18-238ENST00000449544 WASH3PC4AMC7 463 aa8.55□□□□□ -1.04
HCG18-238ENST00000449544 BUD23O43709 281 aaKnown RBP8.55□□□□□ -1.04
HCG18-238ENST00000449544 OPA1O60313 960 aa8.55□□□□□ -1.04
HCG18-238ENST00000449544 TMCC1O94876 653 aa8.55□□□□□ -1.04
HCG18-238ENST00000449544 STAU1O95793 577 aaKnown RBP8.55□□□□□ -1.04
HCG18-238ENST00000449544 EIF3BP55884 814 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms