RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 NMBRP28336 390 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 SFSWAPQ12872 951 aaKnown RBP12.54□□□□□ -0.4
UBE3B-204ENST00000449510 ANKDD1AQ495B1 522 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 SIX5Q8N196 739 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 RDM1Q8NG50 284 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 CRYGNQ8WXF5 182 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 SPATA17Q96L03 361 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 TCF12Q99081 682 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 GOLGA2P5Q9HBQ8 144 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 SCHIP1Q9P0W5 487 aaPredicted RBP12.54□□□□□ -0.4
UBE3B-204ENST00000449510 WNT10BO00744 389 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 NRP1O14786 923 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 IL18RAPO95256 599 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 CD151P48509 253 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 CCNA1P78396 465 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 DMC1Q14565 340 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 TIGD2Q4W5G0 525 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 ATG14Q6ZNE5 492 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 ARMCX6Q7L4S7 300 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 CTU1Q7Z7A3 348 aaKnown RBP12.53□□□□□ -0.4
UBE3B-204ENST00000449510 PSTKQ8IV42 348 aaKnown RBP12.53□□□□□ -0.4
UBE3B-204ENST00000449510 ACMSDQ8TDX5 336 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 BHMTQ93088 406 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 ULK4Q96C45 1275 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 NSMCE2Q96MF7 247 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 REXO4Q9GZR2 422 aaKnown RBP12.53□□□□□ -0.4
UBE3B-204ENST00000449510 GIMAP4Q9NUV9 329 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 CPA4Q9UI42 421 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 OAZ3Q9UMX2 235 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 PPME1Q9Y570 386 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 ATP8B3O60423 1300 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 LOC100506127A0A0U1RQW1 187 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 C2CD4BA6NLJ0 364 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 CAPN14A8MX76 684 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 H3BMM5 538 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 GPR25O00155 361 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 ACKR2O00590 384 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 CBFA2T3O75081 653 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 ALOX12P18054 663 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 JAK1P23458 1154 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 PIGFQ07326 219 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 TAF12Q16514 161 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 PPP1R3AQ16821 1122 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 SPANXN3Q5MJ09 141 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 RSBN1Q5VWQ0 802 aaPredicted RBP12.53□□□□□ -0.4
UBE3B-204ENST00000449510 ZPBP2Q6X784 338 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 ZNF567Q8N184 647 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 VPS33AQ96AX1 596 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 TNIP3Q96KP6 325 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 FBXL18Q96ME1 805 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 SP110Q9HB58 689 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 NT5MQ9NPB1 228 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 PRMT7Q9NVM4 692 aaPredicted RBP12.53□□□□□ -0.4
UBE3B-204ENST00000449510 CD274Q9NZQ7 290 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 COPG1Q9Y678 874 aaKnown RBP12.53□□□□□ -0.4
UBE3B-204ENST00000449510 SLCO1B7G3V0H7 640 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 ZNF682O95780 498 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 USP17L7P0C7H9 530 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 ALOX15P16050 662 aaPredicted RBP12.53□□□□□ -0.4
UBE3B-204ENST00000449510 CHRM3P20309 590 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 SLC5A2P31639 672 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 ARHGDIAP52565 204 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 MGAT5BQ3V5L5 792 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 ABRAXAS1Q6UWZ7 409 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 NAPRTQ6XQN6 538 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 PIGZQ86VD9 579 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 ARFGAP1Q8N6T3 406 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 PQLC3Q8N755 202 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 TNIP2Q8NFZ5 429 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 PPM1MQ96MI6 270 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 ZBTB18Q99592 522 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 SLC29A1Q99808 456 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 CCDC28BQ9BUN5 200 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 BBS2Q9BXC9 721 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 MIR1-1HGQ9H1L0 117 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 ATAD3AQ9NVI7 634 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 SEPT3Q9UH03 358 aa12.53□□□□□ -0.4
UBE3B-204ENST00000449510 BACE1P56817 501 aa12.52□□□□□ -0.4
UBE3B-204ENST00000449510 CDH17Q12864 832 aa12.52□□□□□ -0.4
UBE3B-204ENST00000449510 DNASE1L3Q13609 305 aa12.52□□□□□ -0.4
UBE3B-204ENST00000449510 ATP6AP1LQ52LC2 224 aa12.52□□□□□ -0.4
UBE3B-204ENST00000449510 MAP1SQ66K74 1059 aaPredicted RBP12.52□□□□□ -0.4
UBE3B-204ENST00000449510 NEPROQ6NW34 567 aa12.52□□□□□ -0.4
UBE3B-204ENST00000449510 SNX29P2Q8IUI4 249 aa12.52□□□□□ -0.4
UBE3B-204ENST00000449510 MICALL2Q8IY33 904 aa12.52□□□□□ -0.4
UBE3B-204ENST00000449510 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.52□□□□□ -0.4
UBE3B-204ENST00000449510 BORCS5Q969J3 196 aa12.52□□□□□ -0.4
UBE3B-204ENST00000449510 KCTD15Q96SI1 283 aaPredicted RBP12.52□□□□□ -0.4
UBE3B-204ENST00000449510 OSMRQ99650 979 aa12.52□□□□□ -0.4
UBE3B-204ENST00000449510 C9orf16Q9BUW7 83 aa12.52□□□□□ -0.4
UBE3B-204ENST00000449510 ADI1Q9BV57 179 aa12.52□□□□□ -0.4
UBE3B-204ENST00000449510 ST6GALNAC4Q9H4F1 302 aa12.52□□□□□ -0.4
UBE3B-204ENST00000449510 RAD21L1Q9H4I0 556 aa12.52□□□□□ -0.4
UBE3B-204ENST00000449510 ITM2CQ9NQX7 267 aa12.52□□□□□ -0.4
UBE3B-204ENST00000449510 DNAJC28Q9NX36 388 aa12.52□□□□□ -0.4
UBE3B-204ENST00000449510 TLL2Q9Y6L7 1015 aa12.52□□□□□ -0.4
UBE3B-204ENST00000449510 SF3B1O75533 1304 aaKnown RBP eCLIP12.52□□□□□ -0.4
UBE3B-204ENST00000449510 LRP6O75581 1613 aa12.52□□□□□ -0.4
UBE3B-204ENST00000449510 BHMG1C9JSJ3 638 aaPredicted RBP12.52□□□□□ -0.41
UBE3B-204ENST00000449510 SH3BGRLO75368 114 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms