RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 AIPL1Q9NZN9 384 aa20.03■□□□□ 0.8
VCP-203ENST00000448530 COL5A1P20908 1838 aaPredicted RBP20.02■□□□□ 0.8
VCP-203ENST00000448530 NEMP1O14524 444 aa20.02■□□□□ 0.8
VCP-203ENST00000448530 RNF8O76064 485 aa20.02■□□□□ 0.8
VCP-203ENST00000448530 HTR7P34969 479 aa20.02■□□□□ 0.8
VCP-203ENST00000448530 TPI1P60174 286 aa20.02■□□□□ 0.8
VCP-203ENST00000448530 PARP15Q460N3 678 aa20.02■□□□□ 0.8
VCP-203ENST00000448530 ZNF805Q5CZA5 627 aa20.02■□□□□ 0.8
VCP-203ENST00000448530 SEL1L3Q68CR1 1132 aa20.02■□□□□ 0.8
VCP-203ENST00000448530 CCNI2Q6ZMN8 369 aaPredicted RBP20.02■□□□□ 0.8
VCP-203ENST00000448530 PARS2Q7L3T8 475 aaKnown RBP20.02■□□□□ 0.8
VCP-203ENST00000448530 ZSCAN30Q86W11 494 aa20.02■□□□□ 0.8
VCP-203ENST00000448530 TMEM145Q8NBT3 493 aa20.02■□□□□ 0.8
VCP-203ENST00000448530 RAB7BQ96AH8 199 aa20.02■□□□□ 0.8
VCP-203ENST00000448530 CNDP2Q96KP4 475 aaKnown RBP20.02■□□□□ 0.8
VCP-203ENST00000448530 GDAP1L1Q96MZ0 367 aa20.02■□□□□ 0.8
VCP-203ENST00000448530 OSBPL1AQ9BXW6 950 aa20.02■□□□□ 0.8
VCP-203ENST00000448530 FZD3Q9NPG1 666 aa20.02■□□□□ 0.8
VCP-203ENST00000448530 C16orf96A6NNT2 1141 aa20.01■□□□□ 0.79
VCP-203ENST00000448530 RASA4BC9J798 803 aa20.01■□□□□ 0.79
VCP-203ENST00000448530 ENC1O14682 589 aa20.01■□□□□ 0.79
VCP-203ENST00000448530 ATMINO43313 823 aaPredicted RBP20.01■□□□□ 0.79
VCP-203ENST00000448530 RASA4O43374 803 aa20.01■□□□□ 0.79
VCP-203ENST00000448530 AP1G1O43747 822 aa20.01■□□□□ 0.79
VCP-203ENST00000448530 TMCC1O94876 653 aa20.01■□□□□ 0.79
VCP-203ENST00000448530 IGSF6O95976 241 aa20.01■□□□□ 0.79
VCP-203ENST00000448530 FTLP02792 175 aaPredicted RBP20.01■□□□□ 0.79
VCP-203ENST00000448530 GZMAP12544 262 aa20.01■□□□□ 0.79
VCP-203ENST00000448530 GKP32189 559 aa20.01■□□□□ 0.79
VCP-203ENST00000448530 PRKCIP41743 596 aa20.01■□□□□ 0.79
VCP-203ENST00000448530 RHOAP61586 193 aa20.01■□□□□ 0.79
VCP-203ENST00000448530 OGDHQ02218 1023 aa20.01■□□□□ 0.79
VCP-203ENST00000448530 BNIP3Q12983 259 aa20.01■□□□□ 0.79
VCP-203ENST00000448530 SGCGQ13326 291 aa20.01■□□□□ 0.79
VCP-203ENST00000448530 IQCB1Q15051 598 aa20.01■□□□□ 0.79
VCP-203ENST00000448530 MYLK3Q32MK0 819 aa20.01■□□□□ 0.79
VCP-203ENST00000448530 TMEM259Q4ZIN3 620 aa20.01■□□□□ 0.79
VCP-203ENST00000448530 PLEKHA7Q6IQ23 1121 aa20.01■□□□□ 0.79
VCP-203ENST00000448530 TMPRSS7Q7RTY8 843 aa20.01■□□□□ 0.79
VCP-203ENST00000448530 ZNF571Q7Z3V5 609 aaPredicted RBP20.01■□□□□ 0.79
VCP-203ENST00000448530 FAM174AQ8TBP5 190 aa20.01■□□□□ 0.79
VCP-203ENST00000448530 ARHGEF26Q96DR7 871 aa20.01■□□□□ 0.79
VCP-203ENST00000448530 TRIM11Q96F44 468 aa20.01■□□□□ 0.79
VCP-203ENST00000448530 CALN1Q9BXU9 219 aa20.01■□□□□ 0.79
VCP-203ENST00000448530 SLC17A9Q9BYT1 436 aa20.01■□□□□ 0.79
VCP-203ENST00000448530 AP4E1Q9UPM8 1137 aa20.01■□□□□ 0.79
VCP-203ENST00000448530 ZFR2Q9UPR6 939 aaKnown RBP20.01■□□□□ 0.79
VCP-203ENST00000448530 FADS3Q9Y5Q0 445 aa20.01■□□□□ 0.79
VCP-203ENST00000448530 SYCE3A1L190 88 aa20■□□□□ 0.79
VCP-203ENST00000448530 WASH4PA8MWX3 477 aa20■□□□□ 0.79
VCP-203ENST00000448530 EIF3CLB5ME19 914 aaKnown RBP20■□□□□ 0.79
VCP-203ENST00000448530 DAPK3O43293 454 aa20■□□□□ 0.79
VCP-203ENST00000448530 TSPAN6O43657 245 aa20■□□□□ 0.79
VCP-203ENST00000448530 DKK1O94907 266 aa20■□□□□ 0.79
VCP-203ENST00000448530 UGT2B4P06133 528 aa20■□□□□ 0.79
VCP-203ENST00000448530 SERINC3Q13530 473 aa20■□□□□ 0.79
VCP-203ENST00000448530 NR1I3Q14994 352 aa20■□□□□ 0.79
VCP-203ENST00000448530 KLHL40Q2TBA0 621 aa20■□□□□ 0.79
VCP-203ENST00000448530 HS1BP3Q53T59 392 aa20■□□□□ 0.79
VCP-203ENST00000448530 INO80DQ53TQ3 878 aaPredicted RBP20■□□□□ 0.79
VCP-203ENST00000448530 ATXN7L2Q5T6C5 722 aaPredicted RBP20■□□□□ 0.79
VCP-203ENST00000448530 UMODL1-AS1Q8N2C9 162 aa20■□□□□ 0.79
VCP-203ENST00000448530 ZNF653Q96CK0 615 aa20■□□□□ 0.79
VCP-203ENST00000448530 HMCESQ96FZ2 354 aa20■□□□□ 0.79
VCP-203ENST00000448530 EIF3CQ99613 913 aaKnown RBP20■□□□□ 0.79
VCP-203ENST00000448530 FUCA2Q9BTY2 467 aa20■□□□□ 0.79
VCP-203ENST00000448530 DHX35Q9H5Z1 703 aaKnown RBP20■□□□□ 0.79
VCP-203ENST00000448530 NOL6Q9H6R4 1146 aaKnown RBP20■□□□□ 0.79
VCP-203ENST00000448530 CNOT8Q9UFF9 292 aaKnown RBP20■□□□□ 0.79
VCP-203ENST00000448530 SCINQ9Y6U3 715 aa20■□□□□ 0.79
VCP-203ENST00000448530 A6NNZ2 444 aa19.99■□□□□ 0.79
VCP-203ENST00000448530 GOLGA6L19H0YKK7 550 aa19.99■□□□□ 0.79
VCP-203ENST00000448530 EEF2KO00418 725 aaKnown RBP19.99■□□□□ 0.79
VCP-203ENST00000448530 PRPSAP2O60256 369 aa19.99■□□□□ 0.79
VCP-203ENST00000448530 CDK4P11802 303 aa19.99■□□□□ 0.79
VCP-203ENST00000448530 CLDN2P57739 230 aa19.99■□□□□ 0.79
VCP-203ENST00000448530 ERMARDQ5T6L9 678 aa19.99■□□□□ 0.79
VCP-203ENST00000448530 GDPD4Q6W3E5 623 aa19.99■□□□□ 0.79
VCP-203ENST00000448530 PTAR1Q7Z6K3 402 aaPredicted RBP19.99■□□□□ 0.79
VCP-203ENST00000448530 DCP2Q8IU60 420 aaKnown RBP19.99■□□□□ 0.79
VCP-203ENST00000448530 OR13H1Q8NG92 308 aa19.99■□□□□ 0.79
VCP-203ENST00000448530 KLHL32Q96NJ5 620 aa19.99■□□□□ 0.79
VCP-203ENST00000448530 NCAPGQ9BPX3 1015 aa19.99■□□□□ 0.79
VCP-203ENST00000448530 TTYH3Q9C0H2 523 aa19.99■□□□□ 0.79
VCP-203ENST00000448530 MRPL47Q9HD33 250 aaKnown RBP19.99■□□□□ 0.79
VCP-203ENST00000448530 KLHL11Q9NVR0 708 aa19.99■□□□□ 0.79
VCP-203ENST00000448530 GPATCH2LQ9NWQ4 482 aa19.99■□□□□ 0.79
VCP-203ENST00000448530 PCSK1NQ9UHG2 260 aa19.99■□□□□ 0.79
VCP-203ENST00000448530 PCDHGA1Q9Y5H4 931 aa19.99■□□□□ 0.79
VCP-203ENST00000448530 PLXNB3Q9ULL4 1909 aa19.99■□□□□ 0.79
VCP-203ENST00000448530 TMEM191CA6NGB0 347 aa19.98■□□□□ 0.79
VCP-203ENST00000448530 DDX3XO00571 662 aaKnown RBP eCLIP19.98■□□□□ 0.792e-14■■■□□ 17.9
VCP-203ENST00000448530 SDC3O75056 442 aa19.98■□□□□ 0.79
VCP-203ENST00000448530 PAK4O96013 591 aaPredicted RBP19.98■□□□□ 0.79
VCP-203ENST00000448530 C1SP09871 688 aa19.98■□□□□ 0.79
VCP-203ENST00000448530 MYBL1P10243 752 aa19.98■□□□□ 0.79
VCP-203ENST00000448530 SKILP12757 684 aa19.98■□□□□ 0.79
VCP-203ENST00000448530 NDST2P52849 883 aa19.98■□□□□ 0.79
VCP-203ENST00000448530 TDRD12Q587J7 1177 aaKnown RBP19.98■□□□□ 0.79
VCP-203ENST00000448530 FIGNQ5HY92 759 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms