RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 LINC00854A0A1B0GVQ3 168 aa10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 PLIN3O60664 434 aa10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 NOL3O60936 208 aaKnown RBP10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 GABBR2O75899 941 aa10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 HOXA11P31270 313 aaPredicted RBP10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 CDH5P33151 784 aaPredicted RBP10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 BRCC3P46736 316 aa10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 PPIL2Q13356 520 aa10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 BFSP2Q13515 415 aa10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 PCLAFQ15004 111 aa10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 NOL9Q5SY16 702 aaKnown RBP10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 SCIMPQ6UWF3 145 aa10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 NANOGNBQ7Z5D8 188 aa10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 TFAP2DQ7Z6R9 452 aa10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 CHSY1Q86X52 802 aa10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 NPLOC4Q8TAT6 608 aa10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 TMEM174Q8WUU8 243 aa10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 KCTD4Q8WVF5 259 aa10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 KHSRPQ92945 711 aaKnown RBP eCLIP10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 FBXL20Q96IG2 436 aa10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 C7orf26Q96N11 449 aa10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 PAAF1Q9BRP4 392 aa10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 WDCPQ9H6R7 721 aa10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 SNX15Q9NRS6 342 aa10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 PSMD13Q9UNM6 376 aa10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 PRG3Q9Y2Y8 225 aaPredicted RBP10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 ST14Q9Y5Y6 855 aa10.07□□□□□ -0.8
CDC42SE1-202ENST00000439374 TTC24A2A3L6 582 aaPredicted RBP10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 PSMD12O00232 456 aaPredicted RBP10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 TPD52L2O43399 206 aaKnown RBP10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 VAPBO95292 243 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 POLBP06746 335 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 OR4Q2P0C623 313 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 ZNF182P17025 639 aaPredicted RBP10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 SLC12A2P55011 1212 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 CTBP1Q13363 440 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 STILQ15468 1287 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 ARL13AQ5H913 290 aaPredicted RBP10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 TMEM214Q6NUQ4 689 aaKnown RBP10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 PACS1Q6VY07 963 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 OSTM1Q86WC4 334 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 PPTC7Q8NI37 304 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 ABHD8Q96I13 439 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 SENP8Q96LD8 212 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 DNAI2Q9GZS0 605 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 DSEQ9UL01 958 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 NUP205Q92621 2012 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 AP3B1O00203 1094 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 MSI1O43347 362 aaKnown RBP10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 KDM1AO60341 852 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 CHRM3P20309 590 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 GRM5P41594 1212 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 GSSP48637 474 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 SLC18A2Q05940 514 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 MFSD10Q14728 455 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 PPP1R3AQ16821 1122 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 TEX44Q53QW1 395 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 MBLAC2Q68D91 279 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 PLEKHH3Q7Z736 793 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 ZNF567Q8N184 647 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 OR6P1Q8NGX9 317 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 PABPC5Q96DU9 382 aaKnown RBP10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 ZNF560Q96MR9 790 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 HAPLN3Q96S86 360 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 GATA5Q9BWX5 397 aaPredicted RBP10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 KLHL25Q9H0H3 589 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 TKTL2Q9H0I9 626 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 PIGVQ9NUD9 493 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 RUVBL2Q9Y230 463 aaKnown RBP10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 A0A0A0MRY4 1105 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 C7orf72A4D263 438 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 H3BNX3 289 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 ZBTB24O43167 697 aaPredicted RBP10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 MT-CYBP00156 380 aaPredicted RBP10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 DHRS4L1P0CG22 281 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 ALOX15P16050 662 aaPredicted RBP10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 YBX3P16989 372 aaKnown RBP eCLIP10.06□□□□□ -0.82e-10■■□□□ 11.7
CDC42SE1-202ENST00000439374 ME2P23368 584 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 EEF1DP29692 281 aaKnown RBP10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 GARSP41250 739 aaKnown RBP10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 GRIA4P48058 902 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 CDH13P55290 713 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 LILRA4P59901 499 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 WASHC5Q12768 1159 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 TAF1CQ15572 869 aaPredicted RBP10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 FGD3Q5JSP0 725 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 EGFLAMQ63HQ2 1017 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 SEL1L3Q68CR1 1132 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 ARRDC4Q8NCT1 418 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 SPATA13Q96N96 652 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 SIRPGQ9P1W8 387 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 COPG2Q9UBF2 871 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 GJD2Q9UKL4 321 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 KIAA1257Q9ULG3 409 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 SH3GLB1Q9Y371 365 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 IPPQ9Y573 584 aa10.06□□□□□ -0.8
CDC42SE1-202ENST00000439374 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 STRNO43815 780 aa10.05□□□□□ -0.8
CDC42SE1-202ENST00000439374 TGDSO95455 350 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms