RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 ENDOD1O94919 500 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 MT-CO1P00395 513 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 PNMA6AP0CW24 399 aaPredicted RBP7.92□□□□□ -1.14
VPS50-204ENST00000438395 DESP17661 470 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 ACTN2P35609 894 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 SERPINH1P50454 418 aaKnown RBP7.92□□□□□ -1.14
VPS50-204ENST00000438395 DUSP3P51452 185 aaPredicted RBP7.92□□□□□ -1.14
VPS50-204ENST00000438395 CLDN6P56747 220 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 HNRNPKP61978 463 aaKnown RBP eCLIP7.92□□□□□ -1.14
VPS50-204ENST00000438395 RPS21P63220 83 aaKnown RBP7.92□□□□□ -1.14
VPS50-204ENST00000438395 SLC20A2Q08357 652 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 KCNMA1Q12791 1236 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 BNIP3Q12983 259 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 SGCGQ13326 291 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 EIF4EBP2Q13542 120 aaPredicted RBP7.92□□□□□ -1.14
VPS50-204ENST00000438395 DRAP1Q14919 205 aaPredicted RBP7.92□□□□□ -1.14
VPS50-204ENST00000438395 POLD3Q15054 466 aaPredicted RBP7.92□□□□□ -1.14
VPS50-204ENST00000438395 VWA3BQ502W6 1294 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 ALFQ53S48 1182 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 PIP5KL1Q5T9C9 394 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 RWDD4Q6NW29 188 aaKnown RBP7.92□□□□□ -1.14
VPS50-204ENST00000438395 ZNF783Q6ZMS7 281 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 C14orf80Q86SX3 495 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 ZSCAN30Q86W11 494 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 FAM131BQ86XD5 332 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 ZNF354CQ86Y25 554 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 DCP2Q8IU60 420 aaKnown RBP7.92□□□□□ -1.14
VPS50-204ENST00000438395 PCDH20Q8N6Y1 951 aaKnown RBP7.92□□□□□ -1.14
VPS50-204ENST00000438395 OR52K2Q8NGK3 314 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 OR2A12Q8NGT7 310 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 OR4C6Q8NH72 309 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 FAM131CQ96AQ9 280 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 ALG14Q96F25 216 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 TBCBQ99426 244 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 NPY6RQ99463 290 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 TUBGCP2Q9BSJ2 902 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 HDAC8Q9BY41 377 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 ZYG11BQ9C0D3 744 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 CEP44Q9C0F1 390 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 NRSN2Q9GZP1 204 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 ZDHHC6Q9H6R6 413 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 FZD3Q9NPG1 666 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 ARHGEF38Q9NXL2 777 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 MPP6Q9NZW5 540 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 HPCAL4Q9UM19 191 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 CA5BQ9Y2D0 317 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 OR51B4Q9Y5P0 310 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 A0A0D9SEW6 157 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 FAM170AA1A519 330 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 ANKRD62A6NC57 917 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 SMAD6O43541 496 aaKnown RBP7.91□□□□□ -1.14
VPS50-204ENST00000438395 LEFTY1O75610 366 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 CYP11B1P15538 503 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 DGKAP23743 735 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 ACP1P24666 158 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 ITGB7P26010 798 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 SDC4P31431 198 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 ATP11AP98196 1134 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 GNA12Q03113 381 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 SYCP1Q15431 976 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 ZNF284Q2VY69 593 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 C5orf22Q49AR2 442 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 SOWAHCQ53LP3 525 aaPredicted RBP7.91□□□□□ -1.14
VPS50-204ENST00000438395 HSP90AA4PQ58FG1 418 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 FKBP15Q5T1M5 1219 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 NAA35Q5VZE5 725 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 KIAA1161Q6NSJ0 714 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 KDM7AQ6ZMT4 941 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 DPY19L3Q6ZPD9 716 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 TMC6Q7Z403 805 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 XYLT1Q86Y38 959 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 TMEM145Q8NBT3 493 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 CHST14Q8NCH0 376 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 OR13H1Q8NG92 308 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 OR7D4Q8NG98 312 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 FGF11Q92914 225 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 ARHGEF26Q96DR7 871 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 PGAP3Q96FM1 320 aaPredicted RBP7.91□□□□□ -1.14
VPS50-204ENST00000438395 FEM1CQ96JP0 617 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 C1orf74Q96LT6 269 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 CFAP57Q96MR6 1250 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 DEPDC7Q96QD5 511 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 UBL7Q96S82 380 aaPredicted RBP7.91□□□□□ -1.14
VPS50-204ENST00000438395 HAPLN3Q96S86 360 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 PSMB7Q99436 277 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 LGMNQ99538 433 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 HEPHQ9BQS7 1158 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 DUSP23Q9BVJ7 150 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 C1QTNF7Q9BXJ2 289 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 TM6SF2Q9BZW4 377 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 USP29Q9HBJ7 922 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 SIX2Q9NPC8 291 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 NCKIPSDQ9NZQ3 722 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 ARHGAP20Q9P2F6 1191 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 SNX10Q9Y5X0 201 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 FHOD1Q9Y613 1164 aa7.91□□□□□ -1.14
VPS50-204ENST00000438395 PTPRQQ9UMZ3 2332 aa7.9□□□□□ -1.14
VPS50-204ENST00000438395 DRGXA6NNA5 263 aa7.9□□□□□ -1.14
VPS50-204ENST00000438395 F8VZ95 297 aa7.9□□□□□ -1.14
VPS50-204ENST00000438395 KRIT1O00522 736 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms