RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 CCDC3Q9BQI4 270 aa14.37□□□□□ -0.11
LINC01088-201ENST00000437737 POPDC2Q9HBU9 364 aa14.37□□□□□ -0.11
LINC01088-201ENST00000437737 COX16Q9P0S2 106 aa14.37□□□□□ -0.11
LINC01088-201ENST00000437737 IFNKQ9P0W0 207 aa14.37□□□□□ -0.11
LINC01088-201ENST00000437737 SPASTQ9UBP0 616 aa14.37□□□□□ -0.11
LINC01088-201ENST00000437737 SEPT3Q9UH03 358 aa14.37□□□□□ -0.11
LINC01088-201ENST00000437737 KLF15Q9UIH9 416 aa14.37□□□□□ -0.11
LINC01088-201ENST00000437737 VANGL2Q9ULK5 521 aa14.37□□□□□ -0.11
LINC01088-201ENST00000437737 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.37□□□□□ -0.11
LINC01088-201ENST00000437737 AHCTF1Q8WYP5 2266 aa14.36□□□□□ -0.11
LINC01088-201ENST00000437737 A0A1B0GTH6 734 aa14.36□□□□□ -0.11
LINC01088-201ENST00000437737 GOLGA6L6A8MZA4 724 aa14.36□□□□□ -0.11
LINC01088-201ENST00000437737 FPGTO14772 594 aa14.36□□□□□ -0.11
LINC01088-201ENST00000437737 PLD2O14939 933 aa14.36□□□□□ -0.11
LINC01088-201ENST00000437737 RAD51BO15315 384 aa14.36□□□□□ -0.11
LINC01088-201ENST00000437737 IGLV3-25P01717 112 aa14.36□□□□□ -0.11
LINC01088-201ENST00000437737 AFPP02771 609 aaKnown RBP14.36□□□□□ -0.11
LINC01088-201ENST00000437737 SLC2A3P11169 496 aa14.36□□□□□ -0.11
LINC01088-201ENST00000437737 RECQLP46063 649 aaPredicted RBP14.36□□□□□ -0.11
LINC01088-201ENST00000437737 ZNF75DP51815 510 aa14.36□□□□□ -0.11
LINC01088-201ENST00000437737 NEK3P51956 506 aa14.36□□□□□ -0.11
LINC01088-201ENST00000437737 RPS21P63220 83 aaKnown RBP14.36□□□□□ -0.11
LINC01088-201ENST00000437737 PITX1P78337 314 aaPredicted RBP14.36□□□□□ -0.11
LINC01088-201ENST00000437737 KRT83P78385 493 aa14.36□□□□□ -0.11
LINC01088-201ENST00000437737 NR1I3Q14994 352 aa14.36□□□□□ -0.11
LINC01088-201ENST00000437737 VWA3BQ502W6 1294 aa14.36□□□□□ -0.11
LINC01088-201ENST00000437737 ARSIQ5FYB1 569 aa14.36□□□□□ -0.11
LINC01088-201ENST00000437737 KIAA1161Q6NSJ0 714 aa14.36□□□□□ -0.11
LINC01088-201ENST00000437737 RAB11FIP2Q7L804 512 aa14.36□□□□□ -0.11
LINC01088-201ENST00000437737 TRIM59Q8IWR1 403 aa14.36□□□□□ -0.11
LINC01088-201ENST00000437737 SLC35F3Q8IY50 421 aa14.36□□□□□ -0.11
LINC01088-201ENST00000437737 PPM1KQ8N3J5 372 aa14.36□□□□□ -0.11
LINC01088-201ENST00000437737 CHST14Q8NCH0 376 aa14.36□□□□□ -0.11
LINC01088-201ENST00000437737 BTN2A2Q8WVV5 523 aa14.36□□□□□ -0.11
LINC01088-201ENST00000437737 LIN37Q96GY3 246 aaPredicted RBP14.36□□□□□ -0.11
LINC01088-201ENST00000437737 NT5C1BQ96P26 610 aa14.36□□□□□ -0.11
LINC01088-201ENST00000437737 BOCQ9BWV1 1114 aa14.36□□□□□ -0.11
LINC01088-201ENST00000437737 HDAC8Q9BY41 377 aa14.36□□□□□ -0.11
LINC01088-201ENST00000437737 APOBEC3BQ9UH17 382 aaKnown RBP14.36□□□□□ -0.11
LINC01088-201ENST00000437737 IL36AQ9UHA7 158 aa14.36□□□□□ -0.11
LINC01088-201ENST00000437737 HS3ST2Q9Y278 367 aa14.36□□□□□ -0.11
LINC01088-201ENST00000437737 PCDHGA7Q9Y5G6 932 aa14.36□□□□□ -0.11
LINC01088-201ENST00000437737 K7ERQ8 282 aa14.35□□□□□ -0.11
LINC01088-201ENST00000437737 RNF103O00237 685 aa14.35□□□□□ -0.11
LINC01088-201ENST00000437737 PES1O00541 588 aaKnown RBP14.35□□□□□ -0.11
LINC01088-201ENST00000437737 SNAP91O60641 907 aa14.35□□□□□ -0.11
LINC01088-201ENST00000437737 PPFIA2O75334 1257 aa14.35□□□□□ -0.11
LINC01088-201ENST00000437737 MT-CO1P00395 513 aa14.35□□□□□ -0.11
LINC01088-201ENST00000437737 ANXA6P08133 673 aa14.35□□□□□ -0.11
LINC01088-201ENST00000437737 LIPCP11150 499 aa14.35□□□□□ -0.11
LINC01088-201ENST00000437737 RRM1P23921 792 aa14.35□□□□□ -0.11
LINC01088-201ENST00000437737 CCR1P32246 355 aa14.35□□□□□ -0.11
LINC01088-201ENST00000437737 UGT1A5P35504 534 aa14.35□□□□□ -0.11
LINC01088-201ENST00000437737 GPD2P43304 727 aa14.35□□□□□ -0.11
LINC01088-201ENST00000437737 IRAK1P51617 712 aa14.35□□□□□ -0.11
LINC01088-201ENST00000437737 ADKP55263 362 aaKnown RBP14.35□□□□□ -0.11
LINC01088-201ENST00000437737 YWHAZP63104 245 aaKnown RBP14.35□□□□□ -0.11
LINC01088-201ENST00000437737 TLE1Q04724 770 aa14.35□□□□□ -0.11
LINC01088-201ENST00000437737 EIF3IQ13347 325 aaKnown RBP14.35□□□□□ -0.11
LINC01088-201ENST00000437737 C1orf61Q13536 156 aa14.35□□□□□ -0.11
LINC01088-201ENST00000437737 AUHQ13825 339 aaKnown RBP14.35□□□□□ -0.11
LINC01088-201ENST00000437737 FGL2Q14314 439 aa14.35□□□□□ -0.11
LINC01088-201ENST00000437737 MANEAQ5SRI9 462 aa14.35□□□□□ -0.11
LINC01088-201ENST00000437737 ESRP1Q6NXG1 681 aaKnown RBP14.35□□□□□ -0.11
LINC01088-201ENST00000437737 RBFAQ8N0V3 343 aa14.35□□□□□ -0.11
LINC01088-201ENST00000437737 ZSCAN1Q8NBB4 408 aa14.35□□□□□ -0.11
LINC01088-201ENST00000437737 FEM1CQ96JP0 617 aa14.35□□□□□ -0.11
LINC01088-201ENST00000437737 PPP1R13BQ96KQ4 1090 aa14.35□□□□□ -0.11
LINC01088-201ENST00000437737 C2orf49Q9BVC5 232 aaPredicted RBP14.35□□□□□ -0.11
LINC01088-201ENST00000437737 XPO4Q9C0E2 1151 aaKnown RBP14.35□□□□□ -0.11
LINC01088-201ENST00000437737 STRADBQ9C0K7 418 aa14.35□□□□□ -0.11
LINC01088-201ENST00000437737 VPS16Q9H269 839 aa14.35□□□□□ -0.11
LINC01088-201ENST00000437737 TNKS2Q9H2K2 1166 aa14.35□□□□□ -0.11
LINC01088-201ENST00000437737 NDST4Q9H3R1 872 aa14.35□□□□□ -0.11
LINC01088-201ENST00000437737 RTN4Q9NQC3 1192 aaKnown RBP14.35□□□□□ -0.11
LINC01088-201ENST00000437737 DDIT4Q9NX09 232 aa14.35□□□□□ -0.11
LINC01088-201ENST00000437737 SEPT10Q9P0V9 454 aa14.35□□□□□ -0.11
LINC01088-201ENST00000437737 OR51B4Q9Y5P0 310 aa14.35□□□□□ -0.11
LINC01088-201ENST00000437737 SCN8AQ9UQD0 1980 aa14.34□□□□□ -0.11
LINC01088-201ENST00000437737 LGALS16A8MUM7 142 aa14.34□□□□□ -0.11
LINC01088-201ENST00000437737 E5RJQ4 531 aa14.34□□□□□ -0.11
LINC01088-201ENST00000437737 SPINT1O43278 529 aa14.34□□□□□ -0.11
LINC01088-201ENST00000437737 NOBOXO60393 691 aa14.34□□□□□ -0.11
LINC01088-201ENST00000437737 CLDN11O75508 207 aa14.34□□□□□ -0.11
LINC01088-201ENST00000437737 LEFTY1O75610 366 aa14.34□□□□□ -0.11
LINC01088-201ENST00000437737 RHOCP08134 193 aa14.34□□□□□ -0.11
LINC01088-201ENST00000437737 JMJD7P0C870 316 aa14.34□□□□□ -0.11
LINC01088-201ENST00000437737 ADRB3P13945 408 aa14.34□□□□□ -0.11
LINC01088-201ENST00000437737 HGFP14210 728 aa14.34□□□□□ -0.11
LINC01088-201ENST00000437737 GGCXP38435 758 aa14.34□□□□□ -0.11
LINC01088-201ENST00000437737 RPL34P49207 117 aaKnown RBP14.34□□□□□ -0.11
LINC01088-201ENST00000437737 THOP1P52888 689 aa14.34□□□□□ -0.11
LINC01088-201ENST00000437737 CDK17Q00537 523 aa14.34□□□□□ -0.11
LINC01088-201ENST00000437737 CETN1Q12798 172 aa14.34□□□□□ -0.11
LINC01088-201ENST00000437737 EIF2B5Q13144 721 aaKnown RBP14.34□□□□□ -0.11
LINC01088-201ENST00000437737 SGCGQ13326 291 aa14.34□□□□□ -0.11
LINC01088-201ENST00000437737 PRRT3Q5FWE3 981 aa14.34□□□□□ -0.11
LINC01088-201ENST00000437737 TPRG1LQ5T0D9 272 aa14.34□□□□□ -0.11
LINC01088-201ENST00000437737 C22orf39Q6P5X5 142 aa14.34□□□□□ -0.11
LINC01088-201ENST00000437737 B3GNT8Q7Z7M8 397 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms