RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 TIMM44O43615 452 aa10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 RNASEH1O60930 286 aaKnown RBP10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 VAPBO95292 243 aa10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 PIGNO95427 931 aa10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 PGK1P00558 417 aa10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 LHX1P48742 406 aa10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 INHBCP55103 352 aa10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 CDH17Q12864 832 aa10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 LSM12Q3MHD2 195 aaKnown RBP10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 ARTNQ5T4W7 220 aa10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 DENND5AQ6IQ26 1287 aa10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 DHDDSQ86SQ9 333 aa10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 LSMEM2Q8N112 164 aa10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 FSTL5Q8N475 847 aaPredicted RBP10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 TUBGCP5Q96RT8 1024 aa10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 SPATA16Q9BXB7 569 aa10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 RUVBL2Q9Y230 463 aaKnown RBP10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 MYLKQ15746 1914 aa10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 MATN2O00339 956 aa10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 AIM2O14862 343 aa10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 LSM1O15116 133 aaKnown RBP10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 GRID2O43424 1007 aa10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 POMCP01189 267 aa10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 MYL4P12829 197 aa10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 CHRNA4P43681 627 aa10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 NPY2RP49146 381 aa10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 PURAQ00577 322 aaKnown RBP10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 MAP2K5Q13163 448 aa10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 ITPRIPL1Q6GPH6 555 aa10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 SMARCD1Q96GM5 515 aa10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 NR1H4Q96RI1 486 aaPredicted RBP10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 SYT17Q9BSW7 474 aa10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 KIFC1Q9BW19 673 aa10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 AGO3Q9H9G7 860 aaKnown RBP10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 SPATA7Q9P0W8 599 aa10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 SFMBT1Q9UHJ3 866 aa10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 FAF1Q9UNN5 650 aaPredicted RBP10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 ZNF510Q9Y2H8 683 aa10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 ERI2A8K979 691 aaKnown RBP10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 E2F6O75461 281 aa10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 LYNP07948 512 aa10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 SPATA31D3P0C874 917 aa10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 CSE1LP55060 971 aaKnown RBP10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 MSLNQ13421 630 aaPredicted RBP10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 ANO4Q32M45 955 aa10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 SPATA31D4Q6ZUB0 917 aa10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 OR10T2Q8NGX3 314 aa10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 SGF29Q96ES7 293 aa10.55□□□□□ -0.72
CLSTN1-203ENST00000435891 TARM1B6A8C7 271 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 H3BNX3 289 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 FKBP6O75344 327 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 ITGB1P05556 798 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 TFEBP19484 476 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 HOXC8P31273 242 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 SERPINB6P35237 376 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 NUMBP49757 651 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 AQP4P55087 323 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 FSCN1Q16658 493 aaKnown RBP10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 UPP1Q16831 310 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 TSTD2Q5T7W7 516 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 SPRYD7Q5W111 196 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 SNX32Q86XE0 403 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 FBXW8Q8N3Y1 598 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 RNF148Q8N7C7 305 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 C17orf50Q8WW18 174 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 NXNL1Q96CM4 212 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 SCYL1Q96KG9 808 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 ILKAPQ9H0C8 392 aaPredicted RBP10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 RHOJQ9H4E5 214 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 CSNK1G1Q9HCP0 422 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 XPR1Q9UBH6 696 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 CDH9Q9ULB4 789 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 RAD54BQ9Y620 910 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 ZNF236Q9UL36 1845 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 NEMP2A6NFY4 417 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 DLX3O60479 287 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 CAPN15O75808 1086 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 CHRNA1P02708 482 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 RAG1P15918 1043 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 PIK3R1P27986 724 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 CPT1AP50416 773 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 MTTPP55157 894 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 FRG1Q14331 258 aaKnown RBP10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 CNGA3Q16281 694 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 LIN52Q52LA3 116 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 INTS6LQ5JSJ4 861 aaKnown RBP10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 DCLRE1AQ6PJP8 1040 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 ZYG11AQ6WRX3 759 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 RPS27LQ71UM5 84 aaKnown RBP10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 TSPAN18Q96SJ8 248 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 FICDQ9BVA6 458 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 SLC39A8Q9C0K1 460 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 DRC3Q9H069 523 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 DNAJB4Q9UDY4 337 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 TLK1Q9UKI8 766 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 MAGEB16A2A368 324 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 UNCXA6NJT0 531 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 TMEM114B3SHH9 223 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 MAGEB3O15480 346 aa10.54□□□□□ -0.72
CLSTN1-203ENST00000435891 PMPCBO75439 489 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 150.9 ms