RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 TCEA3O75764 348 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 CHRNGP07510 517 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 SLC1A6P48664 564 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 ALDH3A2P51648 485 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 ERVK-21P61565 698 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 MBTD1Q05BQ5 628 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 LY6KQ17RY6 165 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 SPOCD1Q6ZMY3 1216 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 TKTL2Q9H0I9 626 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 HBS1LQ9Y450 684 aaKnown RBP11.31□□□□□ -0.6
SCN4A-201ENST00000435607 A0A096LPK6 155 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 IFNA6P05013 189 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 OGNP20774 298 aaKnown RBP11.31□□□□□ -0.6
SCN4A-201ENST00000435607 ZFP1Q6P2D0 407 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 CHP1Q99653 195 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 RHOBTB2Q9BYZ6 727 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 TMX2Q9Y320 296 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 KCNE2Q9Y6J6 123 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 PDE5AO76074 875 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 SGPL1O95470 568 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 TCF4P15884 667 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 ME2P23368 584 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 AQP5P55064 265 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 MYBPC2Q14324 1141 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 ZNF34Q8IZ26 560 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 AP3S1Q92572 193 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 KAT5Q92993 513 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 TIFAQ96CG3 184 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 CNGB3Q9NQW8 809 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 MICAL2O94851 1124 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 CAMTA2O94983 1202 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 PPP4CP60510 307 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 PUDPQ08623 228 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 TOP3AQ13472 1001 aaPredicted RBP11.3□□□□□ -0.6
SCN4A-201ENST00000435607 C11orf63Q6NUN7 778 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 PHF10Q8WUB8 498 aaKnown RBP11.3□□□□□ -0.6
SCN4A-201ENST00000435607 COQ7Q99807 217 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 NUAK2Q9H093 628 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 THAP2Q9H0W7 228 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 POLMQ9NP87 494 aaPredicted RBP11.3□□□□□ -0.6
SCN4A-201ENST00000435607 LRRC72A6NJI9 287 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 MATN4O95460 622 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 NFATC1O95644 943 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 TAS2R41P59536 307 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 STK4Q13043 487 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 PPIGQ13427 754 aaKnown RBP eCLIP11.3□□□□□ -0.6
SCN4A-201ENST00000435607 AKIRIN2Q53H80 203 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 AFTPHQ6ULP2 937 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 IRX2Q9BZI1 471 aaPredicted RBP11.3□□□□□ -0.6
SCN4A-201ENST00000435607 OTUD3Q5T2D3 398 aaPredicted RBP11.3□□□□□ -0.6
SCN4A-201ENST00000435607 CERCAMQ5T4B2 595 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 JAZF1Q86VZ6 243 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 C12orf50Q8NA57 414 aaPredicted RBP11.3□□□□□ -0.6
SCN4A-201ENST00000435607 TEFMQ96QE5 360 aaKnown RBP11.3□□□□□ -0.6
SCN4A-201ENST00000435607 GPATCH2LQ9NWQ4 482 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 KLQ9UEF7 1012 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 USP42Q9H9J4 1324 aaKnown RBP11.3□□□□□ -0.6
SCN4A-201ENST00000435607 CCDC162PA2VCL2 907 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 H0Y858 1186 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 KPNA4O00629 521 aaPredicted RBP11.3□□□□□ -0.6
SCN4A-201ENST00000435607 VIL1P09327 827 aaKnown RBP11.3□□□□□ -0.6
SCN4A-201ENST00000435607 PAEPP09466 180 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 ALAS2P22557 587 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 TARSP26639 723 aaKnown RBP11.3□□□□□ -0.6
SCN4A-201ENST00000435607 STXBP5Q5T5C0 1151 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 CCDC33Q8N5R6 958 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 KBTBD7Q8WVZ9 684 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 NELL1Q92832 810 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 RNF145Q96MT1 663 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 FNDC11Q9BVV2 318 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 IL22Q9GZX6 179 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 SMURF2Q9HAU4 748 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 AGPAT5Q9NUQ2 364 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 PLGP00747 810 aaPredicted RBP11.3□□□□□ -0.6
SCN4A-201ENST00000435607 RFTN2Q52LD8 501 aaPredicted RBP11.3□□□□□ -0.6
SCN4A-201ENST00000435607 P4HA3Q7Z4N8 544 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 FAM124AQ86V42 546 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 TREML1Q86YW5 311 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 ZCCHC7Q8N3Z6 543 aaKnown RBP11.3□□□□□ -0.6
SCN4A-201ENST00000435607 EFHD2Q96C19 240 aaPredicted RBP11.3□□□□□ -0.6
SCN4A-201ENST00000435607 PAFAH2Q99487 392 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 IQSEC2Q5JU85 1478 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 SPIRE1Q08AE8 756 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 RASA2Q15283 850 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 Q4G0T1 1027 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 PPP1R15BQ5SWA1 713 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 FAM98AQ8NCA5 519 aaKnown RBP11.3□□□□□ -0.6
SCN4A-201ENST00000435607 TAPBPLQ9BX59 468 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 PLEKHA1Q9HB21 404 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 PCDH9Q9HC56 1237 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.3□□□□□ -0.6
SCN4A-201ENST00000435607 CRNNQ9UBG3 495 aaPredicted RBP11.3□□□□□ -0.6
SCN4A-201ENST00000435607 ERVK-11Q9UQG0 969 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 ASF1AQ9Y294 204 aa11.3□□□□□ -0.6
SCN4A-201ENST00000435607 HSD17B3P37058 310 aa11.29□□□□□ -0.6
SCN4A-201ENST00000435607 MRPS6P82932 125 aaKnown RBP11.29□□□□□ -0.6
SCN4A-201ENST00000435607 ANXA8L1Q5VT79 327 aa11.29□□□□□ -0.6
SCN4A-201ENST00000435607 STK32CQ86UX6 486 aa11.29□□□□□ -0.6
SCN4A-201ENST00000435607 C18orf25Q96B23 403 aaPredicted RBP11.29□□□□□ -0.6
SCN4A-201ENST00000435607 MIEF2Q96C03 454 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms