RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 ITPKCQ96DU7 683 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 TRMT2BQ96GJ1 504 aaKnown RBP3.81□□□□□ -1.8
SHPRH-205ENST00000433355 SLC45A3Q96JT2 553 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 FCRL5Q96RD9 977 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 WDR41Q9HAD4 459 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 TMEM260Q9NX78 707 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 PTTG2Q9NZH5 202 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 SEPT10Q9P0V9 454 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 SUCOQ9UBS9 1254 aaKnown RBP3.81□□□□□ -1.8
SHPRH-205ENST00000433355 PSMD13Q9UNM6 376 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 PCDHB5Q9Y5E4 795 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 NFS1Q9Y697 457 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 ZNF263O14978 683 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 SCN2BO60939 215 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 AGR2O95994 175 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 ABL1P00519 1130 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 ADSSP30520 456 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 CCT8P50990 548 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 CBWD6Q4V339 395 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 CBWD3Q5JTY5 395 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 CBWD5Q5RIA9 395 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 ALG1LQ6GMV1 187 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 NEPROQ6NW34 567 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 EFCAB12Q6NXP0 572 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 IKBIPQ70UQ0 350 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 CPNE9Q8IYJ1 553 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 RBFAQ8N0V3 343 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 CCNYQ8ND76 341 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 OR6B3Q8NGW1 331 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 ACE2Q9BYF1 805 aaPredicted RBP3.81□□□□□ -1.8
SHPRH-205ENST00000433355 GIMAP4Q9NUV9 329 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 TMEM161AQ9NX61 479 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 GNPTGQ9UJJ9 305 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 SNX9Q9Y5X1 595 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 LTA4HP09960 611 aaKnown RBP3.81□□□□□ -1.8
SHPRH-205ENST00000433355 ALOX15P16050 662 aaPredicted RBP3.81□□□□□ -1.8
SHPRH-205ENST00000433355 XPAP23025 273 aaPredicted RBP3.81□□□□□ -1.8
SHPRH-205ENST00000433355 EPHX2P34913 555 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 TEX44Q53QW1 395 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 LIMS2Q7Z4I7 341 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 CLEC4DQ8WXI8 215 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 ITFG2Q969R8 447 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 PPWD1Q96BP3 646 aaKnown RBP3.81□□□□□ -1.8
SHPRH-205ENST00000433355 PAWRQ96IZ0 340 aaKnown RBP3.81□□□□□ -1.8
SHPRH-205ENST00000433355 CLPBQ9H078 707 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 ARHGEF4Q9NR80 690 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 ZIM2Q9NZV7 527 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 NXF1Q9UBU9 619 aaKnown RBP3.81□□□□□ -1.8
SHPRH-205ENST00000433355 PHTF1Q9UMS5 762 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 PTPN22Q9Y2R2 807 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 NR2E3Q9Y5X4 410 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 A0A1B0GVM2 712 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 TCAF2A6NFQ2 919 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 GLTPD2A6NH11 291 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 H0Y626 953 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 CCNT2O60583 730 aaKnown RBP3.81□□□□□ -1.8
SHPRH-205ENST00000433355 WDR47O94967 919 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 TRIM16O95361 564 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 SYF2O95926 243 aaKnown RBP3.81□□□□□ -1.8
SHPRH-205ENST00000433355 FGFR1P11362 822 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 PIK3R1P27986 724 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 ADRA1BP35368 520 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 HPCAL1P37235 193 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 GRIA2P42262 883 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 CUL3Q13618 768 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 PAFAH1B3Q15102 231 aaKnown RBP3.81□□□□□ -1.8
SHPRH-205ENST00000433355 FSCN1Q16658 493 aaKnown RBP3.81□□□□□ -1.8
SHPRH-205ENST00000433355 KCTD21Q4G0X4 260 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 STX19Q8N4C7 294 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 GPR150Q8NGU9 434 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 WFIKKN2Q8TEU8 576 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 OLFM1Q99784 485 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 COQ7Q99807 217 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 CDT1Q9H211 546 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 OR12D3Q9UGF7 316 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 EIF3LQ9Y262 564 aaKnown RBP3.81□□□□□ -1.8
SHPRH-205ENST00000433355 AP5Z1O43299 807 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 DHRS4L1P0CG22 281 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 ACO1P21399 889 aaKnown RBP3.81□□□□□ -1.8
SHPRH-205ENST00000433355 MIPP30301 263 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 MAGEA3P43357 314 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 VASPP50552 380 aaPredicted RBP3.81□□□□□ -1.8
SHPRH-205ENST00000433355 CYTH1Q15438 398 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 INO80DQ53TQ3 878 aaPredicted RBP3.81□□□□□ -1.8
SHPRH-205ENST00000433355 C9orf57Q5W0N0 161 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 DENND1BQ6P3S1 775 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 AHI1Q8N157 1196 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 KBTBD8Q8NFY9 601 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 HSPH1Q92598 858 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 WDR6Q9NNW5 1121 aaKnown RBP3.81□□□□□ -1.8
SHPRH-205ENST00000433355 SAE1Q9UBE0 346 aaPredicted RBP3.81□□□□□ -1.8
SHPRH-205ENST00000433355 TLR6Q9Y2C9 796 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 SPACA6W5XKT8 324 aa3.81□□□□□ -1.8
SHPRH-205ENST00000433355 SLC16A5O15375 505 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 PPP1R11O60927 126 aaPredicted RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 CYP11A1P05108 521 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 GRK3P35626 688 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 CXCR3P49682 368 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 OCA2Q04671 838 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 IL10RBQ08334 325 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms