RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 UBDO15205 165 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 SRP72O76094 671 aaKnown RBP11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 RCVRNP35243 200 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 ARL4AP40617 200 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 TMEM110Q86TL2 294 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 IGFN1Q86VF2 1251 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 KCNMB4Q86W47 210 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 LSMEM2Q8N112 164 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 CCDC185Q8N715 623 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 GABPB2Q8TAK5 448 aaPredicted RBP11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 ZC3H15Q8WU90 426 aaKnown RBP11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 GPRASP2Q96D09 838 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 CPB2Q96IY4 423 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 ADNPQ9H2P0 1102 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 LRRC40Q9H9A6 602 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 FANCEQ9HB96 536 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 SLC38A10Q9HBR0 1119 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 PCDH12Q9NPG4 1184 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 GPRC5DQ9NZD1 345 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 CPSF3Q9UKF6 684 aaKnown RBP11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 VANGL2Q9ULK5 521 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 ERGIC3Q9Y282 383 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 TLL2Q9Y6L7 1015 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 SIPA1L1O43166 1804 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 EI24O14681 340 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 DLX3O60479 287 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 MLNP12872 115 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 CYP3A5P20815 502 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 ATP6V1B2P21281 511 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 IL10P22301 178 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 RFTN1Q14699 578 aaPredicted RBP11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 PGS1Q32NB8 556 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 SPANXN3Q5MJ09 141 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 DCLRE1AQ6PJP8 1040 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 ABRAXAS1Q6UWZ7 409 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 ZYG11AQ6WRX3 759 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 PIGZQ86VD9 579 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 SLC41A1Q8IVJ1 513 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 C1orf127Q8N9H9 656 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 SCAIQ8N9R8 606 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 C17orf50Q8WW18 174 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 LRCH3Q96II8 777 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 KCTD15Q96SI1 283 aaPredicted RBP11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 NAT9Q9BTE0 207 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 MRIQ9BWK5 157 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 DEFB129Q9H1M3 183 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 RPF1Q9H9Y2 349 aaKnown RBP11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 GIN1Q9NXP7 522 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 PKD2L2Q9NZM6 624 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 NCKIPSDQ9NZQ3 722 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 SIX4Q9UIU6 781 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 GNPTGQ9UJJ9 305 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 SOBPA7XYQ1 873 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 MFSD11O43934 449 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 CILPO75339 1184 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 H2AFYO75367 372 aaKnown RBP11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 SULT1C4O75897 302 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 VDRP11473 427 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 LCP1P13796 627 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 OTUD3Q5T2D3 398 aaPredicted RBP11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 NCBP2-AS2Q69YL0 99 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 OR2T34Q8NGX1 318 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 OR2T3Q8NH03 318 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 NXNL1Q96CM4 212 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 ATG4CQ96DT6 458 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 LPIN3Q9BQK8 851 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 TUBA8Q9NY65 449 aaPredicted RBP11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 MID2Q9UJV3 735 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 CDH7Q9ULB5 785 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 SLC27A5Q9Y2P5 690 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 SLCO1B7G3V0H7 640 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 SDHDO14521 159 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 MSCO60682 206 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 PLA2G6O60733 806 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 SNRPB2P08579 225 aaKnown RBP11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 FASP25445 335 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 DCKP27707 260 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 RAD23AP54725 363 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 RAB15P59190 212 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 DNASE1L3Q13609 305 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 HERC3Q15034 1050 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 ANO4Q32M45 955 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 SAMD4BQ5PRF9 694 aaKnown RBP11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 EEF1DP3Q658K8 133 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 SNRNP48Q6IEG0 339 aaKnown RBP11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 ERMP1Q7Z2K6 904 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 ZNF567Q8N184 647 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 DHRSXQ8N5I4 330 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 C1orf50Q9BV19 199 aa11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 EIF2AQ9BY44 585 aaKnown RBP11.68□□□□□ -0.54
HMGCS1-202ENST00000433297 TCRBV3S1A0A5B6 114 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 DHRS12A0PJE2 317 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 KPNA4O00629 521 aaPredicted RBP11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 NDUFB5O43674 189 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 NPM3O75607 178 aaKnown RBP11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 CABYRO75952 493 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 ASNSP08243 561 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 NPR1P16066 1061 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 MYF6P23409 242 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 ELK4P28324 431 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms