RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 IPO11Q9UI26 975 aaKnown RBP16.85■□□□□ 0.29
VARS-216ENST00000428445 TMEM59LQ9UK28 342 aa16.85■□□□□ 0.29
VARS-216ENST00000428445 SETXQ7Z333 2677 aaKnown RBP16.85■□□□□ 0.29
VARS-216ENST00000428445 SPTY2D1-AS1A0A0U1RR47 76 aa16.84■□□□□ 0.29
VARS-216ENST00000428445 NEMP2A6NFY4 417 aa16.84■□□□□ 0.29
VARS-216ENST00000428445 FAM72CH0Y354 149 aa16.84■□□□□ 0.29
VARS-216ENST00000428445 CSF2P04141 144 aa16.84■□□□□ 0.29
VARS-216ENST00000428445 MMEP08473 750 aa16.84■□□□□ 0.29
VARS-216ENST00000428445 KRT10P13645 584 aa16.84■□□□□ 0.29
VARS-216ENST00000428445 PLA2G2AP14555 144 aa16.84■□□□□ 0.29
VARS-216ENST00000428445 JUNDP17535 347 aa16.84■□□□□ 0.29
VARS-216ENST00000428445 ITGB7P26010 798 aa16.84■□□□□ 0.29
VARS-216ENST00000428445 HNRNPKP61978 463 aaKnown RBP eCLIP16.84■□□□□ 0.29
VARS-216ENST00000428445 EIF2B5Q13144 721 aaKnown RBP16.84■□□□□ 0.29
VARS-216ENST00000428445 MAN2A1Q16706 1144 aa16.84■□□□□ 0.29
VARS-216ENST00000428445 CDO1Q16878 200 aa16.84■□□□□ 0.29
VARS-216ENST00000428445 TPD52L1Q16890 204 aaPredicted RBP16.84■□□□□ 0.29
VARS-216ENST00000428445 C15orf59Q2T9L4 293 aaPredicted RBP16.84■□□□□ 0.29
VARS-216ENST00000428445 VWA3BQ502W6 1294 aa16.84■□□□□ 0.29
VARS-216ENST00000428445 C3orf38Q5JPI3 329 aa16.84■□□□□ 0.29
VARS-216ENST00000428445 PERM1Q5SV97 790 aa16.84■□□□□ 0.29
VARS-216ENST00000428445 FAM72AQ5TYM5 149 aa16.84■□□□□ 0.29
VARS-216ENST00000428445 NAA35Q5VZE5 725 aa16.84■□□□□ 0.29
VARS-216ENST00000428445 FAM72DQ6L9T8 149 aa16.84■□□□□ 0.29
VARS-216ENST00000428445 RETSATQ6NUM9 610 aa16.84■□□□□ 0.29
VARS-216ENST00000428445 KYAT3Q6YP21 454 aaKnown RBP16.84■□□□□ 0.29
VARS-216ENST00000428445 EFL1Q7Z2Z2 1120 aaKnown RBP16.84■□□□□ 0.29
VARS-216ENST00000428445 BNIPLQ7Z465 357 aa16.84■□□□□ 0.29
VARS-216ENST00000428445 FAM72BQ86X60 149 aa16.84■□□□□ 0.29
VARS-216ENST00000428445 PCDH20Q8N6Y1 951 aaKnown RBP16.84■□□□□ 0.29
VARS-216ENST00000428445 FAM181AQ8N9Y4 354 aa16.84■□□□□ 0.29
VARS-216ENST00000428445 ZNF248Q8NDW4 579 aa16.84■□□□□ 0.29
VARS-216ENST00000428445 ATXN7L3BQ96GX2 97 aa16.84■□□□□ 0.29
VARS-216ENST00000428445 PPP1R16AQ96I34 528 aa16.84■□□□□ 0.29
VARS-216ENST00000428445 ZNF578Q96N58 590 aaPredicted RBP16.84■□□□□ 0.29
VARS-216ENST00000428445 HAPLN3Q96S86 360 aa16.84■□□□□ 0.29
VARS-216ENST00000428445 NDST4Q9H3R1 872 aa16.84■□□□□ 0.29
VARS-216ENST00000428445 DNAI1Q9UI46 699 aa16.84■□□□□ 0.29
VARS-216ENST00000428445 SATB2Q9UPW6 733 aa16.84■□□□□ 0.29
VARS-216ENST00000428445 TEX51A0A1B0GUA7 166 aa16.83■□□□□ 0.28
VARS-216ENST00000428445 C16orf96A6NNT2 1141 aa16.83■□□□□ 0.28
VARS-216ENST00000428445 KLK10O43240 276 aa16.83■□□□□ 0.28
VARS-216ENST00000428445 GCATO75600 419 aa16.83■□□□□ 0.28
VARS-216ENST00000428445 NME1P15531 152 aaKnown RBP16.83■□□□□ 0.28
VARS-216ENST00000428445 LSSP48449 732 aa16.83■□□□□ 0.28
VARS-216ENST00000428445 PCBP4P57723 403 aaKnown RBP16.83■□□□□ 0.28
VARS-216ENST00000428445 BPIFB4P59827 614 aa16.83■□□□□ 0.28
VARS-216ENST00000428445 SGCGQ13326 291 aa16.83■□□□□ 0.28
VARS-216ENST00000428445 TCEA2Q15560 299 aa16.83■□□□□ 0.28
VARS-216ENST00000428445 ISXQ2M1V0 245 aa16.83■□□□□ 0.28
VARS-216ENST00000428445 KLHDC7AQ5VTJ3 777 aa16.83■□□□□ 0.28
VARS-216ENST00000428445 KIAA1161Q6NSJ0 714 aa16.83■□□□□ 0.28
VARS-216ENST00000428445 FOXR1Q6PIV2 292 aa16.83■□□□□ 0.28
VARS-216ENST00000428445 NYAP1Q6ZVC0 841 aa16.83■□□□□ 0.28
VARS-216ENST00000428445 ZNF605Q86T29 641 aa16.83■□□□□ 0.28
VARS-216ENST00000428445 IFT43Q96FT9 208 aa16.83■□□□□ 0.28
VARS-216ENST00000428445 C1QTNF2Q9BXJ5 285 aa16.83■□□□□ 0.28
VARS-216ENST00000428445 SEMA4CQ9C0C4 833 aa16.83■□□□□ 0.28
VARS-216ENST00000428445 CEP44Q9C0F1 390 aa16.83■□□□□ 0.28
VARS-216ENST00000428445 POLR1BQ9H9Y6 1135 aa16.83■□□□□ 0.28
VARS-216ENST00000428445 ASCL3Q9NQ33 180 aa16.83■□□□□ 0.28
VARS-216ENST00000428445 METTL5Q9NRN9 209 aaKnown RBP16.83■□□□□ 0.28
VARS-216ENST00000428445 CHD5Q8TDI0 1954 aa16.82■□□□□ 0.28
VARS-216ENST00000428445 CFAP46Q8IYW2 2715 aa16.82■□□□□ 0.28
VARS-216ENST00000428445 KRIT1O00522 736 aa16.82■□□□□ 0.28
VARS-216ENST00000428445 FPGTO14772 594 aa16.82■□□□□ 0.28
VARS-216ENST00000428445 AQP9O43315 295 aa16.82■□□□□ 0.28
VARS-216ENST00000428445 GP1BAP07359 652 aa16.82■□□□□ 0.28
VARS-216ENST00000428445 DUSP3P51452 185 aaPredicted RBP16.82■□□□□ 0.28
VARS-216ENST00000428445 CFHR1Q03591 330 aa16.82■□□□□ 0.28
VARS-216ENST00000428445 C1QBPQ07021 282 aaKnown RBP16.82■□□□□ 0.28
VARS-216ENST00000428445 SLC20A2Q08357 652 aa16.82■□□□□ 0.28
VARS-216ENST00000428445 TAF1BQ53T94 588 aaPredicted RBP16.82■□□□□ 0.28
VARS-216ENST00000428445 ATXN7L2Q5T6C5 722 aaPredicted RBP16.82■□□□□ 0.28
VARS-216ENST00000428445 RWDD4Q6NW29 188 aaKnown RBP16.82■□□□□ 0.28
VARS-216ENST00000428445 PARGQ86W56 976 aa16.82■□□□□ 0.28
VARS-216ENST00000428445 DCP2Q8IU60 420 aaKnown RBP16.82■□□□□ 0.28
VARS-216ENST00000428445 MLKLQ8NB16 471 aa16.82■□□□□ 0.28
VARS-216ENST00000428445 SLC20A1Q8WUM9 679 aa16.82■□□□□ 0.28
VARS-216ENST00000428445 ARHGEF2Q92974 986 aaKnown RBP16.82■□□□□ 0.28
VARS-216ENST00000428445 VCPIP1Q96JH7 1222 aa16.82■□□□□ 0.28
VARS-216ENST00000428445 KLHL32Q96NJ5 620 aa16.82■□□□□ 0.28
VARS-216ENST00000428445 TUBGCP2Q9BSJ2 902 aa16.82■□□□□ 0.28
VARS-216ENST00000428445 DUSP23Q9BVJ7 150 aa16.82■□□□□ 0.28
VARS-216ENST00000428445 NAA15Q9BXJ9 866 aaKnown RBP16.82■□□□□ 0.28
VARS-216ENST00000428445 PAXBP1Q9Y5B6 917 aa16.82■□□□□ 0.28
VARS-216ENST00000428445 ENTPD2Q9Y5L3 495 aa16.82■□□□□ 0.28
VARS-216ENST00000428445 GTF3C3Q9Y5Q9 886 aa16.82■□□□□ 0.28
VARS-216ENST00000428445 PYCARD-AS1I3L0S3 204 aa16.81■□□□□ 0.28
VARS-216ENST00000428445 PES1O00541 588 aaKnown RBP16.81■□□□□ 0.28
VARS-216ENST00000428445 NEMP1O14524 444 aa16.81■□□□□ 0.28
VARS-216ENST00000428445 MUSKO15146 869 aa16.81■□□□□ 0.28
VARS-216ENST00000428445 AP1G1O43747 822 aa16.81■□□□□ 0.28
VARS-216ENST00000428445 MMP20O60882 483 aa16.81■□□□□ 0.28
VARS-216ENST00000428445 UGT2B4P06133 528 aa16.81■□□□□ 0.28
VARS-216ENST00000428445 CELA2BP08218 269 aaPredicted RBP16.81■□□□□ 0.28
VARS-216ENST00000428445 RABIFP47224 123 aa16.81■□□□□ 0.28
VARS-216ENST00000428445 ADKP55263 362 aaKnown RBP16.81■□□□□ 0.28
VARS-216ENST00000428445 PFN3P60673 137 aa16.81■□□□□ 0.28
VARS-216ENST00000428445 UBE2HP62256 183 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms