RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 MAB21L3Q8N8X9 362 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 SLC43A3Q8NBI5 491 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 ZNF75CPQ92670 426 aaPredicted RBP5.79□□□□□ -1.48
HERC4-206ENST00000427635 TBATAQ96M53 351 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 SLC4A5Q9BY07 1137 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 RHOBTB2Q9BYZ6 727 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 EPS8L2Q9H6S3 715 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 ZFP14Q9HCL3 533 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 CHMP1AQ9HD42 196 aaPredicted RBP5.79□□□□□ -1.48
HERC4-206ENST00000427635 VANGL2Q9ULK5 521 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 ERCC6L2Q5T890 1561 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 PTPRJQ12913 1337 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 A0A0B4J203 849 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 A0A0B4J269 797 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 ABHD14A-ACY1A0A1B0GW23 586 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 ERI2A8K979 691 aaKnown RBP5.79□□□□□ -1.48
HERC4-206ENST00000427635 C9IYK1 514 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 STX11O75558 287 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 RPA1P27694 616 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 CMPK1P30085 196 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 SELENOVP59797 346 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 OC90Q02509 493 aaPredicted RBP5.79□□□□□ -1.48
HERC4-206ENST00000427635 DCTN2Q13561 401 aaKnown RBP5.79□□□□□ -1.48
HERC4-206ENST00000427635 TFDP3Q5H9I0 405 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 FIP1L1Q6UN15 594 aaKnown RBP5.79□□□□□ -1.48
HERC4-206ENST00000427635 TMC8Q8IU68 726 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 FBXO39Q8N4B4 442 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 ZNF671Q8TAW3 534 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 DENND1AQ8TEH3 1009 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 KIAA1683Q9H0B3 1180 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 ZCCHC17Q9NP64 241 aaKnown RBP5.79□□□□□ -1.48
HERC4-206ENST00000427635 A1CFQ9NQ94 594 aaKnown RBP5.79□□□□□ -1.48
HERC4-206ENST00000427635 SLC35C2Q9NQQ7 365 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 TRHDEQ9UKU6 1024 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 CDH9Q9ULB4 789 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 CORO2BQ9UQ03 480 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 SLCO1B7G3V0H7 640 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 SIN3BO75182 1162 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 TSPAN9O75954 239 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 UBXN7O94888 489 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 S100A6P06703 90 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 PRG2P13727 222 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 CTSOP43234 321 aaPredicted RBP5.79□□□□□ -1.48
HERC4-206ENST00000427635 ATXN1P54253 815 aaKnown RBP5.79□□□□□ -1.48
HERC4-206ENST00000427635 GJA9P57773 515 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 Q4G0T1 1027 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 IKBIPQ70UQ0 350 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 STRA8Q7Z7C7 330 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 EXOC3L1Q86VI1 746 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 FAM81AQ8TBF8 368 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 TMEM125Q96AQ2 219 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 ACAT2Q9BWD1 397 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 TMEM120AQ9BXJ8 343 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 NUSAP1Q9BXS6 441 aaKnown RBP5.79□□□□□ -1.48
HERC4-206ENST00000427635 CYP4F12Q9HCS2 524 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 COQ3Q9NZJ6 369 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 GLS2Q9UI32 602 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 TMX2Q9Y320 296 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 ADGRL2O95490 1459 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 CPED1A4D0V7 1026 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 H0YGN5 161 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 H3BN98 237 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 NCK2O43639 380 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 TGDSO95455 350 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 MMP3P08254 477 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 CXCL8P10145 99 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 EPORP19235 508 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 ATP6V1B2P21281 511 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 CYP2F1P24903 491 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 RBMS1P29558 406 aaKnown RBP5.79□□□□□ -1.48
HERC4-206ENST00000427635 FMO4P31512 558 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 NPTX2P47972 431 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 SERPINH1P50454 418 aaKnown RBP5.79□□□□□ -1.48
HERC4-206ENST00000427635 CAPZA1P52907 286 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 PKN1Q16512 942 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 PRAMEF19Q5SWL8 479 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 METTL21CQ5VZV1 264 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 CHRDL2Q6WN34 429 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 OAFQ86UD1 273 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 PROSER1Q86XN7 944 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 SGCDQ92629 289 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 AKT1S1Q96B36 256 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 ARMC5Q96C12 935 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 LMLNQ96KR4 655 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 YIPF4Q9BSR8 244 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 SPATA6Q9NWH7 488 aaPredicted RBP5.79□□□□□ -1.48
HERC4-206ENST00000427635 SIRPGQ9P1W8 387 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 FAM153AQ9UHL3 310 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 BTBD3Q9Y2F9 522 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 A0A087X1B8 175 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 DDX3XO00571 662 aaKnown RBP eCLIP5.79□□□□□ -1.48
HERC4-206ENST00000427635 MYL12BO14950 172 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 GMFGO60234 142 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 LSM8O95777 96 aaKnown RBP5.79□□□□□ -1.48
HERC4-206ENST00000427635 IDSP22304 550 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 CRABP2P29373 138 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 CSTF2P33240 577 aaKnown RBP eCLIP5.79□□□□□ -1.481e-6■■■□□ 19.1
HERC4-206ENST00000427635 ARL3P36405 182 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 HSPA13P48723 471 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 CCR3P51677 355 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms