RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 SMARCB1Q12824 385 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 CSTF3Q12996 717 aaKnown RBP2.97□□□□□ -1.93
PMS1-209ENST00000424059 ERV3-1Q14264 604 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 STAT4Q14765 748 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 WDR43Q15061 677 aaKnown RBP eCLIP2.97□□□□□ -1.93
PMS1-209ENST00000424059 PTPRRQ15256 657 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 PFKFB3Q16875 520 aaPredicted RBP2.97□□□□□ -1.93
PMS1-209ENST00000424059 ZNF674Q2M3X9 581 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 LEXMQ3ZCV2 418 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 MDH1BQ5I0G3 518 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 EFHC1Q5JVL4 640 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 CYB5D1Q6P9G0 228 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 VWA1Q6PCB0 445 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 C1QL2Q7Z5L3 287 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 SRGAP1Q7Z6B7 1085 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 COMTD1Q86VU5 262 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 PALB2Q86YC2 1186 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 TMTC1Q8IUR5 882 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 HACE1Q8IYU2 909 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 FAM71DQ8N9W8 422 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 PCYOX1LQ8NBM8 494 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 NSUN7Q8NE18 718 aaKnown RBP2.97□□□□□ -1.93
PMS1-209ENST00000424059 DENND6BQ8NEG7 585 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 SLC30A5Q8TAD4 765 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 ENKURQ8TC29 256 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 FAM216AQ8WUB2 273 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 SEPT1Q8WYJ6 367 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 STARD8Q92502 1023 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 SLC22A18Q96BI1 424 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 TMA16Q96EY4 203 aaKnown RBP2.97□□□□□ -1.93
PMS1-209ENST00000424059 HES6Q96HZ4 224 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 PGBD1Q96JS3 809 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 DACH2Q96NX9 599 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 LENG8Q96PV6 779 aaPredicted RBP2.97□□□□□ -1.93
PMS1-209ENST00000424059 SLC2A13Q96QE2 648 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 TREX2Q9BQ50 279 aaPredicted RBP2.97□□□□□ -1.93
PMS1-209ENST00000424059 SDF4Q9BRK5 362 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 CDK19Q9BWU1 502 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 GHITMQ9H3K2 345 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 STN1Q9H668 368 aaKnown RBP2.97□□□□□ -1.93
PMS1-209ENST00000424059 AGO4Q9HCK5 861 aaKnown RBP2.97□□□□□ -1.93
PMS1-209ENST00000424059 RPRD1BQ9NQG5 326 aaKnown RBP2.97□□□□□ -1.93
PMS1-209ENST00000424059 DDX4Q9NQI0 724 aaKnown RBP2.97□□□□□ -1.93
PMS1-209ENST00000424059 POLE3Q9NRF9 147 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 RXFP3Q9NSD7 469 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 PAQR5Q9NXK6 330 aaPredicted RBP2.97□□□□□ -1.93
PMS1-209ENST00000424059 TAS2R7Q9NYW3 318 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 OR6C2Q9NZP2 312 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 HMG20BQ9P0W2 317 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 TBC1D29Q9UFV1 150 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 ERVK-19Q9WJR5 959 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 CBY1Q9Y3M2 126 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 ASB3Q9Y575 518 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 SH3TC1Q8TE82 1336 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 C15orf38-AP3S2A0A0A6YYH1 394 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 C1orf232A0A0U1RR37 186 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 KRT87PA6NCN2 255 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 LRRC14BA6NHZ5 514 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 ERVV-2B6SEH9 535 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 H0YIV9 168 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 MGST3O14880 152 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 PRPSAP2O60256 369 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 KERAO60938 352 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 SEC22BO75396 215 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 IDH1O75874 414 aaKnown RBP2.97□□□□□ -1.93
PMS1-209ENST00000424059 TSPAN9O75954 239 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 HAUS5O94927 633 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 RB1P06400 928 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 ANXA8P13928 327 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 GPD1P21695 349 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 SLC6A2P23975 617 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 LONP1P36776 959 aaKnown RBP2.97□□□□□ -1.93
PMS1-209ENST00000424059 HSPA13P48723 471 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 MTNR1BP49286 362 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 AARSP49588 968 aaKnown RBP eCLIP2.97□□□□□ -1.93
PMS1-209ENST00000424059 SLC12A3P55017 1021 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 DRG2P55039 364 aaKnown RBP2.97□□□□□ -1.93
PMS1-209ENST00000424059 GPX6P59796 221 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 PRKCZQ05513 592 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 ENPEPQ07075 957 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 KLC1Q07866 573 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 COTL1Q14019 142 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 NOMO1Q15155 1222 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 DPYSL2Q16555 572 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 AANATQ16613 207 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 PTPN21Q16825 1174 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 HADHQ16836 314 aaKnown RBP2.97□□□□□ -1.93
PMS1-209ENST00000424059 AAK1Q2M2I8 961 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 ARL13BQ3SXY8 428 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 CDONQ4KMG0 1287 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 HSP90AA4PQ58FG1 418 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 TOR2AQ5JU69 321 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 C1orf185Q5T7R7 199 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 VWA5B1Q5TIE3 1220 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 ANXA8L1Q5VT79 327 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 IL23RQ5VWK5 629 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 SHEQ5VZ18 495 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 CATSPERGQ6ZRH7 1159 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 CLNKQ7Z7G1 428 aa2.97□□□□□ -1.93
PMS1-209ENST00000424059 AKAP14Q86UN6 197 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms