RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 CHST12Q9NRB3 414 aa16.83■□□□□ 0.29
PKP4-204ENST00000421462 SDHDO14521 159 aa16.83■□□□□ 0.28
PKP4-204ENST00000421462 B4GALT4O60513 344 aa16.83■□□□□ 0.28
PKP4-204ENST00000421462 GABBR2O75899 941 aa16.83■□□□□ 0.28
PKP4-204ENST00000421462 MLNP12872 115 aa16.83■□□□□ 0.28
PKP4-204ENST00000421462 ATP6V1B2P21281 511 aa16.83■□□□□ 0.28
PKP4-204ENST00000421462 YWHAQP27348 245 aa16.83■□□□□ 0.28
PKP4-204ENST00000421462 GRM5P41594 1212 aa16.83■□□□□ 0.28
PKP4-204ENST00000421462 CAPRIN1Q14444 709 aaKnown RBP16.83■□□□□ 0.28
PKP4-204ENST00000421462 ZNF829Q3KNS6 432 aaPredicted RBP16.83■□□□□ 0.28
PKP4-204ENST00000421462 ZIK1Q3SY52 487 aaPredicted RBP16.83■□□□□ 0.28
PKP4-204ENST00000421462 CNSTQ6PJW8 725 aa16.83■□□□□ 0.28
PKP4-204ENST00000421462 ZYG11AQ6WRX3 759 aa16.83■□□□□ 0.28
PKP4-204ENST00000421462 DENND6AQ8IWF6 608 aa16.83■□□□□ 0.28
PKP4-204ENST00000421462 OR6B3Q8NGW1 331 aa16.83■□□□□ 0.28
PKP4-204ENST00000421462 USP33Q8TEY7 942 aa16.83■□□□□ 0.28
PKP4-204ENST00000421462 NPLQ9BXD5 320 aaPredicted RBP16.83■□□□□ 0.28
PKP4-204ENST00000421462 ANKRD60Q9BZ19 345 aa16.83■□□□□ 0.28
PKP4-204ENST00000421462 UNC93B1Q9H1C4 597 aa16.83■□□□□ 0.28
PKP4-204ENST00000421462 VPS28Q9UK41 221 aa16.83■□□□□ 0.28
PKP4-204ENST00000421462 DGKBQ9Y6T7 804 aa16.83■□□□□ 0.28
PKP4-204ENST00000421462 BMP10O95393 424 aa16.83■□□□□ 0.28
PKP4-204ENST00000421462 GABRB3P28472 473 aa16.83■□□□□ 0.28
PKP4-204ENST00000421462 SLC7A1P30825 629 aa16.83■□□□□ 0.28
PKP4-204ENST00000421462 STXBP2Q15833 593 aa16.83■□□□□ 0.28
PKP4-204ENST00000421462 LY6KQ17RY6 165 aa16.83■□□□□ 0.28
PKP4-204ENST00000421462 PDCD4Q53EL6 469 aaKnown RBP16.83■□□□□ 0.28
PKP4-204ENST00000421462 CCDC92Q53HC0 331 aaPredicted RBP16.83■□□□□ 0.28
PKP4-204ENST00000421462 MAGEE2Q8TD90 523 aaPredicted RBP16.83■□□□□ 0.28
PKP4-204ENST00000421462 TFAP2CQ92754 450 aa16.83■□□□□ 0.28
PKP4-204ENST00000421462 CORO1BQ9BR76 489 aa16.83■□□□□ 0.28
PKP4-204ENST00000421462 MRPL45Q9BRJ2 306 aaKnown RBP16.83■□□□□ 0.28
PKP4-204ENST00000421462 POMKQ9H5K3 350 aa16.83■□□□□ 0.28
PKP4-204ENST00000421462 MAP3K20Q9NYL2 800 aaKnown RBP16.83■□□□□ 0.28
PKP4-204ENST00000421462 GIMAP2Q9UG22 337 aa16.83■□□□□ 0.28
PKP4-204ENST00000421462 OAZ3Q9UMX2 235 aa16.83■□□□□ 0.28
PKP4-204ENST00000421462 MGAMO43451 1857 aa16.82■□□□□ 0.28
PKP4-204ENST00000421462 UBDO15205 165 aa16.82■□□□□ 0.28
PKP4-204ENST00000421462 SPTLC1O15269 473 aa16.82■□□□□ 0.28
PKP4-204ENST00000421462 IQCF3P0C7M6 154 aa16.82■□□□□ 0.28
PKP4-204ENST00000421462 NR2C2P49116 596 aa16.82■□□□□ 0.28
PKP4-204ENST00000421462 MPP1Q00013 466 aa16.82■□□□□ 0.28
PKP4-204ENST00000421462 DPYSL2Q16555 572 aa16.82■□□□□ 0.28
PKP4-204ENST00000421462 CLEC6AQ6EIG7 209 aa16.82■□□□□ 0.28
PKP4-204ENST00000421462 LCLAT1Q6UWP7 414 aa16.82■□□□□ 0.28
PKP4-204ENST00000421462 CYS1Q717R9 158 aa16.82■□□□□ 0.28
PKP4-204ENST00000421462 FAM35AQ86V20 835 aa16.82■□□□□ 0.28
PKP4-204ENST00000421462 PIGZQ86VD9 579 aa16.82■□□□□ 0.28
PKP4-204ENST00000421462 HM13Q8TCT9 377 aa16.82■□□□□ 0.28
PKP4-204ENST00000421462 HEPHQ9BQS7 1158 aa16.82■□□□□ 0.28
PKP4-204ENST00000421462 NAT9Q9BTE0 207 aa16.82■□□□□ 0.28
PKP4-204ENST00000421462 TNFRSF12AQ9NP84 129 aa16.82■□□□□ 0.28
PKP4-204ENST00000421462 ZNF277Q9NRM2 450 aaPredicted RBP16.82■□□□□ 0.28
PKP4-204ENST00000421462 GINS2Q9Y248 185 aa16.82■□□□□ 0.28
PKP4-204ENST00000421462 CITO14578 2027 aa16.82■□□□□ 0.28
PKP4-204ENST00000421462 SRP72O76094 671 aaKnown RBP16.82■□□□□ 0.28
PKP4-204ENST00000421462 UBA1P22314 1058 aaKnown RBP16.82■□□□□ 0.28
PKP4-204ENST00000421462 FKBP1AP62942 108 aaKnown RBP16.82■□□□□ 0.28
PKP4-204ENST00000421462 TUBA4AP68366 448 aa16.82■□□□□ 0.28
PKP4-204ENST00000421462 STX5Q13190 355 aa16.82■□□□□ 0.28
PKP4-204ENST00000421462 TMEM132BQ14DG7 1078 aa16.82■□□□□ 0.28
PKP4-204ENST00000421462 MAMDC4Q6UXC1 1216 aa16.82■□□□□ 0.28
PKP4-204ENST00000421462 IFNLR1Q8IU57 520 aaPredicted RBP16.82■□□□□ 0.28
PKP4-204ENST00000421462 SULF1Q8IWU6 871 aa16.82■□□□□ 0.28
PKP4-204ENST00000421462 KDM1BQ8NB78 822 aa16.82■□□□□ 0.28
PKP4-204ENST00000421462 CXorf38Q8TB03 319 aa16.82■□□□□ 0.28
PKP4-204ENST00000421462 TCF12Q99081 682 aa16.82■□□□□ 0.28
PKP4-204ENST00000421462 FTHL17Q9BXU8 183 aa16.82■□□□□ 0.28
PKP4-204ENST00000421462 ZFYVE28Q9HCC9 887 aa16.82■□□□□ 0.28
PKP4-204ENST00000421462 SACM1LQ9NTJ5 587 aa16.82■□□□□ 0.28
PKP4-204ENST00000421462 CROTQ9UKG9 612 aa16.82■□□□□ 0.28
PKP4-204ENST00000421462 TRPC5Q9UL62 973 aaPredicted RBP16.82■□□□□ 0.28
PKP4-204ENST00000421462 ZCWPW2A0A1B0GU75 182 aa16.81■□□□□ 0.28
PKP4-204ENST00000421462 GJA9P57773 515 aa16.81■□□□□ 0.28
PKP4-204ENST00000421462 NSUN2Q08J23 767 aaKnown RBP eCLIP16.81■□□□□ 0.28
PKP4-204ENST00000421462 MERTKQ12866 999 aa16.81■□□□□ 0.28
PKP4-204ENST00000421462 BFSP2Q13515 415 aa16.81■□□□□ 0.28
PKP4-204ENST00000421462 KIF19Q2TAC6 998 aa16.81■□□□□ 0.28
PKP4-204ENST00000421462 NLGN1Q8N2Q7 840 aa16.81■□□□□ 0.28
PKP4-204ENST00000421462 CPSF7Q8N684 471 aaKnown RBP16.81■□□□□ 0.28
PKP4-204ENST00000421462 ZNF280CQ8ND82 737 aa16.81■□□□□ 0.28
PKP4-204ENST00000421462 EXT2Q93063 718 aa16.81■□□□□ 0.28
PKP4-204ENST00000421462 NEURL2Q9BR09 285 aa16.81■□□□□ 0.28
PKP4-204ENST00000421462 DPEP3Q9H4B8 488 aa16.81■□□□□ 0.28
PKP4-204ENST00000421462 SUCOQ9UBS9 1254 aaKnown RBP16.81■□□□□ 0.28
PKP4-204ENST00000421462 ZNHIT2Q9UHR6 403 aa16.81■□□□□ 0.28
PKP4-204ENST00000421462 CNOT11Q9UKZ1 510 aaKnown RBP16.81■□□□□ 0.28
PKP4-204ENST00000421462 RBM47A0AV96 593 aaKnown RBP16.81■□□□□ 0.28
PKP4-204ENST00000421462 HTR3EA5X5Y0 456 aa16.81■□□□□ 0.28
PKP4-204ENST00000421462 MAFO75444 373 aaPredicted RBP16.81■□□□□ 0.28
PKP4-204ENST00000421462 C8BP07358 591 aa16.81■□□□□ 0.28
PKP4-204ENST00000421462 C1QTNF8P60827 252 aa16.81■□□□□ 0.28
PKP4-204ENST00000421462 SEPT6Q14141 434 aa16.81■□□□□ 0.28
PKP4-204ENST00000421462 GEN1Q17RS7 908 aa16.81■□□□□ 0.28
PKP4-204ENST00000421462 TRIM16LQ309B1 348 aa16.81■□□□□ 0.28
PKP4-204ENST00000421462 OTUD3Q5T2D3 398 aaPredicted RBP16.81■□□□□ 0.28
PKP4-204ENST00000421462 DHRS4L2Q6PKH6 230 aa16.81■□□□□ 0.28
PKP4-204ENST00000421462 CLEC14AQ86T13 490 aa16.81■□□□□ 0.28
PKP4-204ENST00000421462 SLC7A5P1Q8MH63 180 aa16.81■□□□□ 0.28
PKP4-204ENST00000421462 SHCBP1Q8NEM2 672 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms