RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 BRI3BPQ8WY22 251 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 ATP6V1E2Q96A05 226 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 PKP2Q99959 881 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 RBM22Q9NW64 420 aaKnown RBP eCLIP12.05□□□□□ -0.48
LIMK1-202ENST00000418310 FNDC3AQ9Y2H6 1198 aaKnown RBP12.05□□□□□ -0.48
LIMK1-202ENST00000418310 COPG1Q9Y678 874 aaKnown RBP12.05□□□□□ -0.48
LIMK1-202ENST00000418310 hCG_2014768A0A024R1R8 64 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 GLDCP23378 1020 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 EPHX2P34913 555 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 PPARGP37231 505 aaPredicted RBP12.04□□□□□ -0.48
LIMK1-202ENST00000418310 NAB1Q13506 487 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 KCTD11Q693B1 232 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 CLEC14AQ86T13 490 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 KBTBD6Q86V97 674 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 LSMEM2Q8N112 164 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 OR6P1Q8NGX9 317 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 HEXDCQ8WVB3 486 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 JADE3Q92613 823 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 NT5C3BQ969T7 300 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 PRPF18Q99633 342 aaKnown RBP12.04□□□□□ -0.48
LIMK1-202ENST00000418310 TBL1YQ9BQ87 522 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 SPATA16Q9BXB7 569 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 TRIM8Q9BZR9 551 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 VCX3BQ9H321 246 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 RHOJQ9H4E5 214 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 FAM96AQ9H5X1 160 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 TRPC7Q9HCX4 862 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 DOCK3Q8IZD9 2030 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 ANKRD12Q6UB98 2062 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 WARSP23381 471 aaKnown RBP12.04□□□□□ -0.48
LIMK1-202ENST00000418310 ETFBP38117 255 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 PSEN2P49810 448 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 CDK18Q07002 472 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 ZYG11AQ6WRX3 759 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 LILRA2Q8N149 483 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 DQX1Q8TE96 717 aaKnown RBP12.04□□□□□ -0.48
LIMK1-202ENST00000418310 PABPC5Q96DU9 382 aaKnown RBP12.04□□□□□ -0.48
LIMK1-202ENST00000418310 DRC3Q9H069 523 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 TMLHEQ9NVH6 421 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 ADAM28Q9UKQ2 775 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 LAMA2P24043 3122 aaKnown RBP12.04□□□□□ -0.48
LIMK1-202ENST00000418310 PIRTP0C851 137 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 MYL4P12829 197 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 ALOX15P16050 662 aaPredicted RBP12.04□□□□□ -0.48
LIMK1-202ENST00000418310 CDH13P55290 713 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 PDAP1Q13442 181 aaKnown RBP12.04□□□□□ -0.48
LIMK1-202ENST00000418310 SLC12A1Q13621 1099 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 PTK2BQ14289 1009 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 TIGD5Q53EQ6 642 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 GPR152Q8TDT2 470 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 HDAC11Q96DB2 347 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 KLHL32Q96NJ5 620 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 TRAPPC9Q96Q05 1148 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 GPR22Q99680 433 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 DNAI2Q9GZS0 605 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 FBRSL1Q9HCM7 1045 aaKnown RBP12.04□□□□□ -0.48
LIMK1-202ENST00000418310 DDX18Q9NVP1 670 aaKnown RBP12.04□□□□□ -0.48
LIMK1-202ENST00000418310 UBAP1Q9NZ09 502 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 FLRT1Q9NZU1 646 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 GTF2IRD1Q9UHL9 959 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 AP4B1Q9Y6B7 739 aa12.04□□□□□ -0.48
LIMK1-202ENST00000418310 TPST1O60507 370 aa12.03□□□□□ -0.48
LIMK1-202ENST00000418310 PTPRCAPQ14761 206 aa12.03□□□□□ -0.48
LIMK1-202ENST00000418310 AGKQ53H12 422 aa12.03□□□□□ -0.48
LIMK1-202ENST00000418310 TRIM67Q6ZTA4 783 aa12.03□□□□□ -0.48
LIMK1-202ENST00000418310 AMIGO2Q86SJ2 522 aa12.03□□□□□ -0.48
LIMK1-202ENST00000418310 TOP6BLQ8N6T0 577 aa12.03□□□□□ -0.48
LIMK1-202ENST00000418310 SHCBP1Q8NEM2 672 aa12.03□□□□□ -0.48
LIMK1-202ENST00000418310 PHF12Q96QT6 1004 aa12.03□□□□□ -0.48
LIMK1-202ENST00000418310 SERPINI1Q99574 410 aa12.03□□□□□ -0.48
LIMK1-202ENST00000418310 C1QTNF1Q9BXJ1 281 aa12.03□□□□□ -0.48
LIMK1-202ENST00000418310 SLC39A8Q9C0K1 460 aa12.03□□□□□ -0.48
LIMK1-202ENST00000418310 STK39Q9UEW8 545 aa12.03□□□□□ -0.48
LIMK1-202ENST00000418310 CRYL1Q9Y2S2 319 aa12.03□□□□□ -0.48
LIMK1-202ENST00000418310 PTGDR2Q9Y5Y4 395 aa12.03□□□□□ -0.48
LIMK1-202ENST00000418310 SMIM35A0A1B0GVV1 85 aa12.03□□□□□ -0.48
LIMK1-202ENST00000418310 F2P00734 622 aa12.03□□□□□ -0.48
LIMK1-202ENST00000418310 HLA-DQB2P05538 268 aa12.03□□□□□ -0.48
LIMK1-202ENST00000418310 THP07101 528 aa12.03□□□□□ -0.48
LIMK1-202ENST00000418310 YWHAQP27348 245 aa12.03□□□□□ -0.48
LIMK1-202ENST00000418310 SCNN1AP37088 669 aa12.03□□□□□ -0.48
LIMK1-202ENST00000418310 RAB27AP51159 221 aa12.03□□□□□ -0.48
LIMK1-202ENST00000418310 CHN2P52757 468 aa12.03□□□□□ -0.48
LIMK1-202ENST00000418310 RAB10P61026 200 aa12.03□□□□□ -0.48
LIMK1-202ENST00000418310 GALNT2Q10471 571 aa12.03□□□□□ -0.48
LIMK1-202ENST00000418310 PRKAA1Q13131 559 aa12.03□□□□□ -0.48
LIMK1-202ENST00000418310 TSTD2Q5T7W7 516 aa12.03□□□□□ -0.48
LIMK1-202ENST00000418310 C16orf89Q6UX73 402 aa12.03□□□□□ -0.48
LIMK1-202ENST00000418310 SH3RF2Q8TEC5 729 aa12.03□□□□□ -0.48
LIMK1-202ENST00000418310 DIS3LQ8TF46 1054 aaKnown RBP12.03□□□□□ -0.48
LIMK1-202ENST00000418310 OCEL1Q9H607 264 aa12.03□□□□□ -0.48
LIMK1-202ENST00000418310 ARHGEF38Q9NXL2 777 aa12.03□□□□□ -0.48
LIMK1-202ENST00000418310 PSMD13Q9UNM6 376 aa12.03□□□□□ -0.48
LIMK1-202ENST00000418310 SLC4A7Q9Y6M7 1214 aa12.03□□□□□ -0.48
LIMK1-202ENST00000418310 LOC285556D6RIA3 1793 aa12.03□□□□□ -0.48
LIMK1-202ENST00000418310 GJB3O75712 270 aa12.02□□□□□ -0.48
LIMK1-202ENST00000418310 FBXO21O94952 628 aa12.02□□□□□ -0.48
LIMK1-202ENST00000418310 CRTAMO95727 393 aa12.02□□□□□ -0.48
LIMK1-202ENST00000418310 ATP5BP06576 529 aaKnown RBP12.02□□□□□ -0.48
LIMK1-202ENST00000418310 HMBSP08397 361 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms