RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 MORF4L1Q9UBU8 362 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 PSMD11O00231 422 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 FARP2O94887 1054 aaPredicted RBP8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 KRT75O95678 551 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 ATP6V1B2P21281 511 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 ZNF143P52747 638 aaPredicted RBP8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 RAD23AP54725 363 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 E2F2Q14209 437 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 MAPRE2Q15555 327 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 MAPRE1Q15691 268 aaKnown RBP8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 Q3C1V9 767 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 SH3PXD2AQ5TCZ1 1133 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 DSG4Q86SJ6 1040 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 PCDH19Q8TAB3 1148 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 MRPL46Q9H2W6 279 aaKnown RBP8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 ATP13A3Q9H7F0 1226 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 ACSS2Q9NR19 701 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 OAZ3Q9UMX2 235 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 CARD8Q9Y2G2 431 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 UBIAD1Q9Y5Z9 338 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 H0YCG3 227 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 ACOX3O15254 700 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 APOA4P06727 396 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 ERVK-10P10266 1014 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 JAK3P52333 1124 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 LIMK2P53671 638 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 PRKAA2P54646 552 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 TCP10Q12799 353 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 MTMR1Q13613 665 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 RAB6CQ53S08 254 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 TMTC4Q5T4D3 741 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 C8orf82Q6P1X6 216 aaPredicted RBP8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 HHIPL2Q6UWX4 724 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 ZYG11AQ6WRX3 759 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 USP43Q70EL4 1123 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 ELMOD1Q8N336 334 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 HMGCLL1Q8TB92 370 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 RDH11Q8TC12 318 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 CALML6Q8TD86 181 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 ZUFSPQ96AP4 578 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 MCRS1Q96EZ8 462 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 CENPNQ96H22 339 aaPredicted RBP8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 ACE2Q9BYF1 805 aaPredicted RBP8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 LHPPQ9H008 270 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 RAB6CQ9H0N0 254 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 MRGBPQ9NV56 204 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 GDAP2Q9NXN4 497 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 SMPD3Q9NY59 655 aaPredicted RBP8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 HES2Q9Y543 173 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 FAM149AA5PLN7 773 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 NOTOA8MTQ0 251 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 PHGDHO43175 533 aaKnown RBP8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 MGAT1P26572 445 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 HOXA10P31260 410 aaPredicted RBP8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 SPRP35270 261 aaPredicted RBP8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 JAG1P78504 1218 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 TRIM32Q13049 653 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 SPCS2Q15005 226 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 SMAD1Q15797 465 aaKnown RBP8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 FSTL4Q6MZW2 842 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 FAM45BPQ6NSW5 357 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 TFAP2DQ7Z6R9 452 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 LSMEM2Q8N112 164 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 ANKRD52Q8NB46 1076 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 PDZD8Q8NEN9 1154 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 FAM45AQ8TCE6 357 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 CERS2Q96G23 380 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 VMP1Q96GC9 406 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 TXNDC15Q96J42 360 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 MAGED4Q96JG8 741 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 CNPY3Q9BT09 278 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 DEFB129Q9H1M3 183 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 DHRS12A0PJE2 317 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 SDHDO14521 159 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 PRPSAP2O60256 369 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 NUAK1O60285 661 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 CCNE2O96020 404 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 NCAM1P13591 858 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 FASP25445 335 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 NAGLUP54802 743 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 SESN2P58004 480 aaPredicted RBP8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 AQP6Q13520 282 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 ATAD3BQ5T9A4 648 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 BROXQ5VW32 411 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 PPP2R2DQ66LE6 453 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 SNX29P2Q8IUI4 249 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 SFRP1Q8N474 314 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 SHCBP1Q8NEM2 672 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 OR7G1Q8NGA0 311 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 CAPSLQ8WWF8 208 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 FKBP10Q96AY3 582 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 CEP170P1Q96L14 293 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 DHX35Q9H5Z1 703 aaKnown RBP8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 COL20A1Q9P218 1284 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 SYNPO2Q9UMS6 1093 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 AURKCQ9UQB9 309 aa8.11□□□□□ -1.11
HMGXB4-202ENST00000418170 SIP14410 1827 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 DYTNA2CJ06 578 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 AQP12BA6NM10 295 aa8.1□□□□□ -1.11
HMGXB4-202ENST00000418170 TK2O00142 265 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms