RNA–Protein interactions for RNA: ENST00000414142.5

SNHG17-202, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,102 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-202ENST00000414142 WBP2Q969T9 261 aa13.89□□□□□ -0.19
SNHG17-202ENST00000414142 PRICKLE1Q96MT3 831 aaPredicted RBP13.89□□□□□ -0.19
SNHG17-202ENST00000414142 PRKAG2Q9UGJ0 569 aa13.89□□□□□ -0.19
SNHG17-202ENST00000414142 TCAF1Q9Y4C2 921 aa13.89□□□□□ -0.19
SNHG17-202ENST00000414142 MYLKQ15746 1914 aa13.89□□□□□ -0.19
SNHG17-202ENST00000414142 TGM5O43548 720 aa13.88□□□□□ -0.19
SNHG17-202ENST00000414142 RHOCP08134 193 aa13.88□□□□□ -0.19
SNHG17-202ENST00000414142 MMP2P08253 660 aa13.88□□□□□ -0.19
SNHG17-202ENST00000414142 BGNP21810 368 aa13.88□□□□□ -0.19
SNHG17-202ENST00000414142 SGSHP51688 502 aa13.88□□□□□ -0.19
SNHG17-202ENST00000414142 SMAD3P84022 425 aaKnown RBP13.88□□□□□ -0.19
SNHG17-202ENST00000414142 TNK2Q07912 1038 aa13.88□□□□□ -0.19
SNHG17-202ENST00000414142 PPIGQ13427 754 aaKnown RBP eCLIP13.88□□□□□ -0.194e-7■■■□□ 18
SNHG17-202ENST00000414142 SETDB1Q15047 1291 aa13.88□□□□□ -0.19
SNHG17-202ENST00000414142 ESRP1Q6NXG1 681 aaKnown RBP13.88□□□□□ -0.19
SNHG17-202ENST00000414142 CYB5D1Q6P9G0 228 aa13.88□□□□□ -0.19
SNHG17-202ENST00000414142 TMC7Q7Z402 723 aa13.88□□□□□ -0.19
SNHG17-202ENST00000414142 BBS5Q8N3I7 341 aa13.88□□□□□ -0.19
SNHG17-202ENST00000414142 DCLK2Q8N568 766 aa13.88□□□□□ -0.19
SNHG17-202ENST00000414142 KLHL23Q8NBE8 558 aa13.88□□□□□ -0.19
SNHG17-202ENST00000414142 OR52K2Q8NGK3 314 aa13.88□□□□□ -0.19
SNHG17-202ENST00000414142 PTCD2Q8WV60 388 aaKnown RBP13.88□□□□□ -0.19
SNHG17-202ENST00000414142 SEMA3CQ99985 751 aa13.88□□□□□ -0.19
SNHG17-202ENST00000414142 POLR1EQ9GZS1 481 aaKnown RBP13.88□□□□□ -0.19
SNHG17-202ENST00000414142 YY1AP1Q9H869 796 aa13.88□□□□□ -0.19
SNHG17-202ENST00000414142 CHD5Q8TDI0 1954 aa13.88□□□□□ -0.19
SNHG17-202ENST00000414142 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.88□□□□□ -0.19
SNHG17-202ENST00000414142 H3BNC9 293 aa13.88□□□□□ -0.19
SNHG17-202ENST00000414142 VAPBO95292 243 aa13.88□□□□□ -0.19
SNHG17-202ENST00000414142 HDCP19113 662 aa13.88□□□□□ -0.19
SNHG17-202ENST00000414142 SKIV2L2P42285 1042 aaKnown RBP13.88□□□□□ -0.19
SNHG17-202ENST00000414142 SERPINH1P50454 418 aaKnown RBP13.88□□□□□ -0.19
SNHG17-202ENST00000414142 LIMK2P53671 638 aa13.88□□□□□ -0.19
SNHG17-202ENST00000414142 OXCT1P55809 520 aa13.88□□□□□ -0.19
SNHG17-202ENST00000414142 PDE1CQ14123 709 aaPredicted RBP13.88□□□□□ -0.19
SNHG17-202ENST00000414142 FYB2Q5VWT5 728 aa13.88□□□□□ -0.19
SNHG17-202ENST00000414142 TXNDC8Q6A555 127 aa13.88□□□□□ -0.19
SNHG17-202ENST00000414142 OTOAQ7RTW8 1153 aa13.88□□□□□ -0.19
SNHG17-202ENST00000414142 ARL14EPQ8N8R7 260 aaPredicted RBP13.88□□□□□ -0.19
SNHG17-202ENST00000414142 TTC16Q8NEE8 873 aa13.88□□□□□ -0.19
SNHG17-202ENST00000414142 ARRDC2Q8TBH0 407 aa13.88□□□□□ -0.19
SNHG17-202ENST00000414142 PTPRN2Q92932 1015 aa13.88□□□□□ -0.19
SNHG17-202ENST00000414142 ZNF599Q96NL3 588 aa13.88□□□□□ -0.19
SNHG17-202ENST00000414142 ECT2Q9H8V3 914 aa13.88□□□□□ -0.19
SNHG17-202ENST00000414142 ARNT2Q9HBZ2 717 aa13.88□□□□□ -0.19
SNHG17-202ENST00000414142 MRM3Q9HC36 420 aaKnown RBP13.88□□□□□ -0.19
SNHG17-202ENST00000414142 NSMCE4AQ9NXX6 385 aa13.88□□□□□ -0.19
SNHG17-202ENST00000414142 DCDC2Q9UHG0 476 aa13.88□□□□□ -0.19
SNHG17-202ENST00000414142 GGT7Q9UJ14 662 aa13.88□□□□□ -0.19
SNHG17-202ENST00000414142 INSL6Q9Y581 213 aa13.88□□□□□ -0.19
SNHG17-202ENST00000414142 A0A1B0GVM2 712 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 TCAF2A6NFQ2 919 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 SCAMP3O14828 347 aaKnown RBP13.87□□□□□ -0.19
SNHG17-202ENST00000414142 GLRA3O75311 464 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 DCTN3O75935 186 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 CSPG5O95196 566 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 TOP3BO95985 862 aaKnown RBP13.87□□□□□ -0.19
SNHG17-202ENST00000414142 LRG1P02750 347 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 PAMP19021 973 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 HOXD9P28356 352 aaPredicted RBP13.87□□□□□ -0.19
SNHG17-202ENST00000414142 GABRR2P28476 465 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 ABCG1P45844 678 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 SERPINB8P50452 374 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 CSE1LP55060 971 aaKnown RBP13.87□□□□□ -0.19
SNHG17-202ENST00000414142 IRX4P78413 519 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 HTRA4P83105 476 aaPredicted RBP13.87□□□□□ -0.19
SNHG17-202ENST00000414142 FSTL4Q6MZW2 842 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 CHST9Q7L1S5 443 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 TRIM42Q8IWZ5 723 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 ZNF398Q8TD17 642 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 BADQ92934 168 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 RMDN2Q96LZ7 410 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 SLC22A12Q96S37 553 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 TSSK1BQ9BXA7 367 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 PDFQ9HBH1 243 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 ATP13A1Q9HD20 1204 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 SNX15Q9NRS6 342 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 SLC2A6Q9UGQ3 507 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 MTO1Q9Y2Z2 717 aaKnown RBP13.87□□□□□ -0.19
SNHG17-202ENST00000414142 ASB3Q9Y575 518 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 ILVBLA1L0T0 632 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 HEATR9A2RTY3 570 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 TIMM44O43615 452 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 KDELR3O43731 214 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 ATP5HO75947 161 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 FPGSQ05932 587 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 THOC5Q13769 683 aaKnown RBP13.87□□□□□ -0.19
SNHG17-202ENST00000414142 IHHQ14623 411 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 CNGA3Q16281 694 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 PPM1JQ5JR12 505 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 C16orf46Q6P387 395 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 KYAT3Q6YP21 454 aaKnown RBP13.87□□□□□ -0.19
SNHG17-202ENST00000414142 NUDCD3Q8IVD9 361 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 PARP9Q8IXQ6 854 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 IFT43Q96FT9 208 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 MECRQ9BV79 373 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 PRKD2Q9BZL6 878 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 IL21Q9HBE4 155 aa13.87□□□□□ -0.19
SNHG17-202ENST00000414142 UBA2Q9UBT2 640 aaPredicted RBP13.87□□□□□ -0.19
SNHG17-202ENST00000414142 ACTL7AQ9Y615 435 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms