RNA–Protein interactions for RNA: ENST00000413758.1

COL6A2-205, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-205ENST00000413758 PARVAQ9NVD7 372 aa17.09■□□□□ 0.33
COL6A2-205ENST00000413758 NEU3Q9UQ49 428 aa17.09■□□□□ 0.33
COL6A2-205ENST00000413758 FADS3Q9Y5Q0 445 aa17.09■□□□□ 0.33
COL6A2-205ENST00000413758 AKAP13Q12802 2813 aa17.08■□□□□ 0.33
COL6A2-205ENST00000413758 CXorf51AA0A1B0GTR3 108 aa17.08■□□□□ 0.32
COL6A2-205ENST00000413758 TCRBV5S1A1TA0A578 114 aa17.08■□□□□ 0.32
COL6A2-205ENST00000413758 C16orf96A6NNT2 1141 aa17.08■□□□□ 0.32
COL6A2-205ENST00000413758 RASA4BC9J798 803 aa17.08■□□□□ 0.32
COL6A2-205ENST00000413758 RASA4O43374 803 aa17.08■□□□□ 0.32
COL6A2-205ENST00000413758 TMCC1O94876 653 aa17.08■□□□□ 0.32
COL6A2-205ENST00000413758 AIF1P55008 147 aa17.08■□□□□ 0.32
COL6A2-205ENST00000413758 TPI1P60174 286 aa17.08■□□□□ 0.32
COL6A2-205ENST00000413758 RHOAP61586 193 aa17.08■□□□□ 0.32
COL6A2-205ENST00000413758 TPM4P67936 248 aa17.08■□□□□ 0.32
COL6A2-205ENST00000413758 MYLK3Q32MK0 819 aa17.08■□□□□ 0.32
COL6A2-205ENST00000413758 ZNF805Q5CZA5 627 aa17.08■□□□□ 0.32
COL6A2-205ENST00000413758 PLPP6Q8IY26 295 aa17.08■□□□□ 0.32
COL6A2-205ENST00000413758 TMEM145Q8NBT3 493 aa17.08■□□□□ 0.32
COL6A2-205ENST00000413758 NETO2Q8NC67 525 aa17.08■□□□□ 0.32
COL6A2-205ENST00000413758 OR13H1Q8NG92 308 aa17.08■□□□□ 0.32
COL6A2-205ENST00000413758 HMCESQ96FZ2 354 aa17.08■□□□□ 0.32
COL6A2-205ENST00000413758 LRIG1Q96JA1 1093 aa17.08■□□□□ 0.32
COL6A2-205ENST00000413758 VCPIP1Q96JH7 1222 aa17.08■□□□□ 0.32
COL6A2-205ENST00000413758 GDAP1L1Q96MZ0 367 aa17.08■□□□□ 0.32
COL6A2-205ENST00000413758 HAUS4Q9H6D7 363 aa17.08■□□□□ 0.32
COL6A2-205ENST00000413758 GPATCH2LQ9NWQ4 482 aa17.08■□□□□ 0.32
COL6A2-205ENST00000413758 IPO11Q9UI26 975 aaKnown RBP17.08■□□□□ 0.32
COL6A2-205ENST00000413758 PTPRBP23467 1997 aa17.08■□□□□ 0.32
COL6A2-205ENST00000413758 A6NNZ2 444 aa17.07■□□□□ 0.32
COL6A2-205ENST00000413758 FGF10O15520 208 aaPredicted RBP17.07■□□□□ 0.32
COL6A2-205ENST00000413758 DAPK3O43293 454 aa17.07■□□□□ 0.32
COL6A2-205ENST00000413758 RFPL3O75679 317 aa17.07■□□□□ 0.32
COL6A2-205ENST00000413758 DKK1O94907 266 aa17.07■□□□□ 0.32
COL6A2-205ENST00000413758 IGSF6O95976 241 aa17.07■□□□□ 0.32
COL6A2-205ENST00000413758 PAK4O96013 591 aaPredicted RBP17.07■□□□□ 0.32
COL6A2-205ENST00000413758 YBEYP58557 167 aaPredicted RBP17.07■□□□□ 0.32
COL6A2-205ENST00000413758 OGDHQ02218 1023 aa17.07■□□□□ 0.32
COL6A2-205ENST00000413758 KLHL30Q0D2K2 578 aa17.07■□□□□ 0.32
COL6A2-205ENST00000413758 MAMLD1Q13495 774 aa17.07■□□□□ 0.32
COL6A2-205ENST00000413758 TMEM259Q4ZIN3 620 aa17.07■□□□□ 0.32
COL6A2-205ENST00000413758 PPP1R15BQ5SWA1 713 aa17.07■□□□□ 0.32
COL6A2-205ENST00000413758 Q6ZSR6 202 aa17.07■□□□□ 0.32
COL6A2-205ENST00000413758 MDM1Q8TC05 714 aa17.07■□□□□ 0.32
COL6A2-205ENST00000413758 KLHL32Q96NJ5 620 aa17.07■□□□□ 0.32
COL6A2-205ENST00000413758 NCAPGQ9BPX3 1015 aa17.07■□□□□ 0.32
COL6A2-205ENST00000413758 OSBPL1AQ9BXW6 950 aa17.07■□□□□ 0.32
COL6A2-205ENST00000413758 DHX35Q9H5Z1 703 aaKnown RBP17.07■□□□□ 0.32
COL6A2-205ENST00000413758 KLHL11Q9NVR0 708 aa17.07■□□□□ 0.32
COL6A2-205ENST00000413758 PCSK1NQ9UHG2 260 aa17.07■□□□□ 0.32
COL6A2-205ENST00000413758 IGLON5A6NGN9 336 aa17.06■□□□□ 0.32
COL6A2-205ENST00000413758 FFAR2O15552 330 aa17.06■□□□□ 0.32
COL6A2-205ENST00000413758 TSPAN6O43657 245 aa17.06■□□□□ 0.32
COL6A2-205ENST00000413758 AP1G1O43747 822 aa17.06■□□□□ 0.32
COL6A2-205ENST00000413758 RNF8O76064 485 aa17.06■□□□□ 0.32
COL6A2-205ENST00000413758 FTLP02792 175 aaPredicted RBP17.06■□□□□ 0.32
COL6A2-205ENST00000413758 JUPP14923 745 aa17.06■□□□□ 0.32
COL6A2-205ENST00000413758 XPAP23025 273 aaPredicted RBP17.06■□□□□ 0.32
COL6A2-205ENST00000413758 HNF1BP35680 557 aa17.06■□□□□ 0.32
COL6A2-205ENST00000413758 ABL2P42684 1182 aa17.06■□□□□ 0.32
COL6A2-205ENST00000413758 PARP15Q460N3 678 aa17.06■□□□□ 0.32
COL6A2-205ENST00000413758 GDPD4Q6W3E5 623 aa17.06■□□□□ 0.32
COL6A2-205ENST00000413758 GCNT7Q6ZNI0 430 aa17.06■□□□□ 0.32
COL6A2-205ENST00000413758 TTC7BQ86TV6 843 aa17.06■□□□□ 0.32
COL6A2-205ENST00000413758 DNAAF5Q86Y56 855 aa17.06■□□□□ 0.32
COL6A2-205ENST00000413758 FAM174AQ8TBP5 190 aa17.06■□□□□ 0.32
COL6A2-205ENST00000413758 CASKIN2Q8WXE0 1202 aa17.06■□□□□ 0.32
COL6A2-205ENST00000413758 RAB7BQ96AH8 199 aa17.06■□□□□ 0.32
COL6A2-205ENST00000413758 NAP1L5Q96NT1 182 aaPredicted RBP17.06■□□□□ 0.32
COL6A2-205ENST00000413758 TTYH3Q9C0H2 523 aa17.06■□□□□ 0.32
COL6A2-205ENST00000413758 KLC2Q9H0B6 622 aa17.06■□□□□ 0.32
COL6A2-205ENST00000413758 NOL6Q9H6R4 1146 aaKnown RBP17.06■□□□□ 0.32
COL6A2-205ENST00000413758 DNAJC28Q9NX36 388 aa17.06■□□□□ 0.32
COL6A2-205ENST00000413758 DONSONQ9NYP3 566 aa17.06■□□□□ 0.32
COL6A2-205ENST00000413758 MYO1AQ9UBC5 1043 aa17.06■□□□□ 0.32
COL6A2-205ENST00000413758 AP4E1Q9UPM8 1137 aa17.06■□□□□ 0.32
COL6A2-205ENST00000413758 ITM2BQ9Y287 266 aa17.06■□□□□ 0.32
COL6A2-205ENST00000413758 PCDHGA1Q9Y5H4 931 aa17.06■□□□□ 0.32
COL6A2-205ENST00000413758 HS3ST3A1Q9Y663 406 aa17.06■□□□□ 0.32
COL6A2-205ENST00000413758 IGF2RP11717 2491 aa17.06■□□□□ 0.32
COL6A2-205ENST00000413758 PLXNB3Q9ULL4 1909 aa17.06■□□□□ 0.32
COL6A2-205ENST00000413758 COL5A1P20908 1838 aaPredicted RBP17.05■□□□□ 0.32
COL6A2-205ENST00000413758 TRPM6Q9BX84 2022 aa17.05■□□□□ 0.32
COL6A2-205ENST00000413758 A0A1W2PQC6 194 aa17.05■□□□□ 0.32
COL6A2-205ENST00000413758 EEF2KO00418 725 aaKnown RBP17.05■□□□□ 0.32
COL6A2-205ENST00000413758 FPGTO14772 594 aa17.05■□□□□ 0.32
COL6A2-205ENST00000413758 PRPSAP2O60256 369 aa17.05■□□□□ 0.32
COL6A2-205ENST00000413758 C1SP09871 688 aa17.05■□□□□ 0.32
COL6A2-205ENST00000413758 CDK4P11802 303 aa17.05■□□□□ 0.32
COL6A2-205ENST00000413758 SKILP12757 684 aa17.05■□□□□ 0.32
COL6A2-205ENST00000413758 CKMT2P17540 419 aa17.05■□□□□ 0.32
COL6A2-205ENST00000413758 ACADVLP49748 655 aa17.05■□□□□ 0.32
COL6A2-205ENST00000413758 DAB2P98082 770 aa17.05■□□□□ 0.32
COL6A2-205ENST00000413758 SERINC3Q13530 473 aa17.05■□□□□ 0.32
COL6A2-205ENST00000413758 SMAD1Q15797 465 aaKnown RBP17.05■□□□□ 0.32
COL6A2-205ENST00000413758 ZNF542PQ5EBM4 170 aa17.05■□□□□ 0.32
COL6A2-205ENST00000413758 LRRC73Q5JTD7 316 aa17.05■□□□□ 0.32
COL6A2-205ENST00000413758 ZNF571Q7Z3V5 609 aaPredicted RBP17.05■□□□□ 0.32
COL6A2-205ENST00000413758 ABI3BPQ7Z7G0 1075 aa17.05■□□□□ 0.32
COL6A2-205ENST00000413758 ZSCAN30Q86W11 494 aa17.05■□□□□ 0.32
COL6A2-205ENST00000413758 PROSER1Q86XN7 944 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms