RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 ZNF354CQ86Y25 554 aa18■□□□□ 0.47
LSM5-204ENST00000409909 RYBPQ8N488 228 aaPredicted RBP18■□□□□ 0.47
LSM5-204ENST00000409909 MFSD2AQ8NA29 543 aa18■□□□□ 0.47
LSM5-204ENST00000409909 OR2AP1Q8NGE2 309 aa18■□□□□ 0.47
LSM5-204ENST00000409909 RHBDD1Q8TEB9 315 aa18■□□□□ 0.47
LSM5-204ENST00000409909 SKA1Q96BD8 255 aa18■□□□□ 0.47
LSM5-204ENST00000409909 PPP1R16AQ96I34 528 aa18■□□□□ 0.47
LSM5-204ENST00000409909 ELF4Q99607 663 aaPredicted RBP18■□□□□ 0.47
LSM5-204ENST00000409909 SCNM1Q9BWG6 230 aa18■□□□□ 0.47
LSM5-204ENST00000409909 LRRC19Q9H756 370 aa18■□□□□ 0.47
LSM5-204ENST00000409909 LUC7L2Q9Y383 392 aaKnown RBP18■□□□□ 0.47
LSM5-204ENST00000409909 ZZEF1O43149 2961 aa18■□□□□ 0.47
LSM5-204ENST00000409909 A0A087X0T9 212 aa17.99■□□□□ 0.47
LSM5-204ENST00000409909 PRAMEF26H0Y7S4 382 aa17.99■□□□□ 0.47
LSM5-204ENST00000409909 EEF2KO00418 725 aaKnown RBP17.99■□□□□ 0.47
LSM5-204ENST00000409909 KRIT1O00522 736 aa17.99■□□□□ 0.47
LSM5-204ENST00000409909 SLC31A1O15431 190 aa17.99■□□□□ 0.47
LSM5-204ENST00000409909 PRPSAP2O60256 369 aa17.99■□□□□ 0.47
LSM5-204ENST00000409909 DFNA5O60443 496 aa17.99■□□□□ 0.47
LSM5-204ENST00000409909 PCDH8O95206 1070 aa17.99■□□□□ 0.47
LSM5-204ENST00000409909 POP4O95707 220 aaKnown RBP17.99■□□□□ 0.47
LSM5-204ENST00000409909 FTH1P19P0C7X4 201 aa17.99■□□□□ 0.47
LSM5-204ENST00000409909 FAM228BP0C875 321 aa17.99■□□□□ 0.47
LSM5-204ENST00000409909 TCF4P15884 667 aa17.99■□□□□ 0.47
LSM5-204ENST00000409909 CASP14P31944 242 aa17.99■□□□□ 0.47
LSM5-204ENST00000409909 NEK3P51956 506 aa17.99■□□□□ 0.47
LSM5-204ENST00000409909 SNRPD1P62314 119 aaKnown RBP17.99■□□□□ 0.47
LSM5-204ENST00000409909 TMEM259Q4ZIN3 620 aa17.99■□□□□ 0.47
LSM5-204ENST00000409909 INO80DQ53TQ3 878 aaPredicted RBP17.99■□□□□ 0.47
LSM5-204ENST00000409909 SEL1L3Q68CR1 1132 aa17.99■□□□□ 0.47
LSM5-204ENST00000409909 SLCO6A1Q86UG4 719 aa17.99■□□□□ 0.47
LSM5-204ENST00000409909 PNPLA1Q8N8W4 532 aa17.99■□□□□ 0.47
LSM5-204ENST00000409909 TMEM145Q8NBT3 493 aa17.99■□□□□ 0.47
LSM5-204ENST00000409909 IQCDQ96DY2 449 aa17.99■□□□□ 0.47
LSM5-204ENST00000409909 CELF6Q96J87 481 aaKnown RBP17.99■□□□□ 0.47
LSM5-204ENST00000409909 THAP2Q9H0W7 228 aa17.99■□□□□ 0.47
LSM5-204ENST00000409909 MRPL47Q9HD33 250 aaKnown RBP17.99■□□□□ 0.47
LSM5-204ENST00000409909 GDF3Q9NR23 364 aa17.99■□□□□ 0.47
LSM5-204ENST00000409909 FADS3Q9Y5Q0 445 aa17.99■□□□□ 0.47
LSM5-204ENST00000409909 IGF2RP11717 2491 aa17.99■□□□□ 0.47
LSM5-204ENST00000409909 TRPM6Q9BX84 2022 aa17.99■□□□□ 0.47
LSM5-204ENST00000409909 FREM2Q5SZK8 3169 aa17.99■□□□□ 0.47
LSM5-204ENST00000409909 C16orf96A6NNT2 1141 aa17.98■□□□□ 0.47
LSM5-204ENST00000409909 EIF3CLB5ME19 914 aaKnown RBP17.98■□□□□ 0.47
LSM5-204ENST00000409909 J3KR12 359 aa17.98■□□□□ 0.47
LSM5-204ENST00000409909 IL1R2P27930 398 aa17.98■□□□□ 0.47
LSM5-204ENST00000409909 NDST2P52849 883 aa17.98■□□□□ 0.47
LSM5-204ENST00000409909 STAT4Q14765 748 aa17.98■□□□□ 0.47
LSM5-204ENST00000409909 CYTH1Q15438 398 aa17.98■□□□□ 0.47
LSM5-204ENST00000409909 SLC45A4Q5BKX6 768 aa17.98■□□□□ 0.47
LSM5-204ENST00000409909 ZNF805Q5CZA5 627 aa17.98■□□□□ 0.47
LSM5-204ENST00000409909 PPP6R3Q5H9R7 873 aaPredicted RBP17.98■□□□□ 0.47
LSM5-204ENST00000409909 FBXL19Q6PCT2 694 aa17.98■□□□□ 0.47
LSM5-204ENST00000409909 RFX8Q6ZV50 586 aa17.98■□□□□ 0.47
LSM5-204ENST00000409909 RAB44Q7Z6P3 723 aaPredicted RBP17.98■□□□□ 0.47
LSM5-204ENST00000409909 IQCHQ86VS3 1027 aa17.98■□□□□ 0.47
LSM5-204ENST00000409909 GATAD2AQ86YP4 633 aa17.98■□□□□ 0.47
LSM5-204ENST00000409909 CHCHD4Q8N4Q1 142 aa17.98■□□□□ 0.47
LSM5-204ENST00000409909 CASKIN2Q8WXE0 1202 aa17.98■□□□□ 0.47
LSM5-204ENST00000409909 LRIG1Q96JA1 1093 aa17.98■□□□□ 0.47
LSM5-204ENST00000409909 EIF3CQ99613 913 aaKnown RBP17.98■□□□□ 0.47
LSM5-204ENST00000409909 MYOCQ99972 504 aa17.98■□□□□ 0.47
LSM5-204ENST00000409909 SLC39A8Q9C0K1 460 aa17.98■□□□□ 0.47
LSM5-204ENST00000409909 FZD3Q9NPG1 666 aa17.98■□□□□ 0.47
LSM5-204ENST00000409909 TOR4AQ9NXH8 423 aa17.98■□□□□ 0.47
LSM5-204ENST00000409909 DMXL2Q8TDJ6 3036 aa17.97■□□□□ 0.47
LSM5-204ENST00000409909 SPINT1O43278 529 aa17.97■□□□□ 0.47
LSM5-204ENST00000409909 AP1G1O43747 822 aa17.97■□□□□ 0.47
LSM5-204ENST00000409909 TRIM16O95361 564 aa17.97■□□□□ 0.47
LSM5-204ENST00000409909 UGT2B4P06133 528 aa17.97■□□□□ 0.47
LSM5-204ENST00000409909 ATXN1LP0C7T5 689 aaKnown RBP17.97■□□□□ 0.47
LSM5-204ENST00000409909 ERCC2P18074 760 aa17.97■□□□□ 0.47
LSM5-204ENST00000409909 PCK1P35558 622 aa17.97■□□□□ 0.47
LSM5-204ENST00000409909 ABL2P42684 1182 aa17.97■□□□□ 0.47
LSM5-204ENST00000409909 GRK6P43250 576 aa17.97■□□□□ 0.47
LSM5-204ENST00000409909 PAPOLAP51003 745 aaKnown RBP17.97■□□□□ 0.47
LSM5-204ENST00000409909 FGL2Q14314 439 aa17.97■□□□□ 0.47
LSM5-204ENST00000409909 NFKBIBQ15653 356 aa17.97■□□□□ 0.47
LSM5-204ENST00000409909 AFMIDQ63HM1 303 aa17.97■□□□□ 0.47
LSM5-204ENST00000409909 VPS36Q86VN1 386 aa17.97■□□□□ 0.47
LSM5-204ENST00000409909 PSTKQ8IV42 348 aaKnown RBP17.97■□□□□ 0.47
LSM5-204ENST00000409909 SAP25Q8TEE9 199 aa17.97■□□□□ 0.47
LSM5-204ENST00000409909 BTBD6Q96KE9 485 aa17.97■□□□□ 0.47
LSM5-204ENST00000409909 KLHL32Q96NJ5 620 aa17.97■□□□□ 0.47
LSM5-204ENST00000409909 CDC6Q99741 560 aa17.97■□□□□ 0.47
LSM5-204ENST00000409909 ERVMER34-1Q9H9K5 563 aa17.97■□□□□ 0.47
LSM5-204ENST00000409909 PDFQ9HBH1 243 aa17.97■□□□□ 0.47
LSM5-204ENST00000409909 CWC15Q9P013 229 aaKnown RBP17.97■□□□□ 0.47
LSM5-204ENST00000409909 LHX3Q9UBR4 397 aa17.97■□□□□ 0.47
LSM5-204ENST00000409909 KLK13Q9UKR3 277 aa17.97■□□□□ 0.47
LSM5-204ENST00000409909 NENFQ9UMX5 172 aa17.97■□□□□ 0.47
LSM5-204ENST00000409909 INSIG1O15503 277 aa17.96■□□□□ 0.47
LSM5-204ENST00000409909 PRAMEF11O60813 436 aa17.96■□□□□ 0.47
LSM5-204ENST00000409909 CYP1A2P05177 515 aa17.96■□□□□ 0.47
LSM5-204ENST00000409909 HNRNPH3P31942 346 aaKnown RBP17.96■□□□□ 0.47
LSM5-204ENST00000409909 RXRGP48443 463 aa17.96■□□□□ 0.47
LSM5-204ENST00000409909 HCAR3P49019 387 aa17.96■□□□□ 0.47
LSM5-204ENST00000409909 RHOAP61586 193 aa17.96■□□□□ 0.47
LSM5-204ENST00000409909 OVGP1Q12889 678 aa17.96■□□□□ 0.47
LSM5-204ENST00000409909 BNIP3Q12983 259 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms