RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 GPD2P43304 727 aa7.91□□□□□ -1.14
LSM5-202ENST00000409292 CSRP3P50461 194 aa7.91□□□□□ -1.14
LSM5-202ENST00000409292 BLKP51451 505 aa7.91□□□□□ -1.14
LSM5-202ENST00000409292 DNA2P51530 1060 aa7.91□□□□□ -1.14
LSM5-202ENST00000409292 GEMIN4P57678 1058 aaKnown RBP7.91□□□□□ -1.14
LSM5-202ENST00000409292 NME3Q13232 169 aa7.91□□□□□ -1.14
LSM5-202ENST00000409292 AUHQ13825 339 aaKnown RBP7.91□□□□□ -1.14
LSM5-202ENST00000409292 CDKN3Q16667 212 aa7.91□□□□□ -1.14
LSM5-202ENST00000409292 ZNF284Q2VY69 593 aa7.91□□□□□ -1.14
LSM5-202ENST00000409292 COBLL1Q53SF7 1204 aa7.91□□□□□ -1.14
LSM5-202ENST00000409292 PIP5KL1Q5T9C9 394 aa7.91□□□□□ -1.14
LSM5-202ENST00000409292 ANKRD40Q6AI12 368 aa7.91□□□□□ -1.14
LSM5-202ENST00000409292 FBXL22Q6P050 247 aa7.91□□□□□ -1.14
LSM5-202ENST00000409292 INO80CQ6PI98 192 aaPredicted RBP7.91□□□□□ -1.14
LSM5-202ENST00000409292 RRAGAQ7L523 313 aa7.91□□□□□ -1.14
LSM5-202ENST00000409292 ABI3BPQ7Z7G0 1075 aa7.91□□□□□ -1.14
LSM5-202ENST00000409292 TMEM110Q86TL2 294 aa7.91□□□□□ -1.14
LSM5-202ENST00000409292 SETD3Q86TU7 594 aaPredicted RBP7.91□□□□□ -1.14
LSM5-202ENST00000409292 JAMLQ86YT9 394 aa7.91□□□□□ -1.14
LSM5-202ENST00000409292 SMYD4Q8IYR2 804 aaPredicted RBP7.91□□□□□ -1.14
LSM5-202ENST00000409292 DEFB106AQ8N104 65 aa7.91□□□□□ -1.14
LSM5-202ENST00000409292 UBR7Q8N806 425 aa7.91□□□□□ -1.14
LSM5-202ENST00000409292 DCAF4L2Q8NA75 395 aa7.91□□□□□ -1.14
LSM5-202ENST00000409292 ZNF548Q8NEK5 533 aaPredicted RBP7.91□□□□□ -1.14
LSM5-202ENST00000409292 GRIN3AQ8TCU5 1115 aa7.91□□□□□ -1.14
LSM5-202ENST00000409292 SNRNP27Q8WVK2 155 aaKnown RBP7.91□□□□□ -1.14
LSM5-202ENST00000409292 RAB7BQ96AH8 199 aa7.91□□□□□ -1.14
LSM5-202ENST00000409292 DHTKD1Q96HY7 919 aaPredicted RBP7.91□□□□□ -1.14
LSM5-202ENST00000409292 SLC46A1Q96NT5 459 aa7.91□□□□□ -1.14
LSM5-202ENST00000409292 CCNL2Q96S94 520 aaPredicted RBP7.91□□□□□ -1.14
LSM5-202ENST00000409292 HDAC8Q9BY41 377 aa7.91□□□□□ -1.14
LSM5-202ENST00000409292 SLC17A9Q9BYT1 436 aa7.91□□□□□ -1.14
LSM5-202ENST00000409292 SLC13A1Q9BZW2 595 aa7.91□□□□□ -1.14
LSM5-202ENST00000409292 CEP44Q9C0F1 390 aa7.91□□□□□ -1.14
LSM5-202ENST00000409292 SIK2Q9H0K1 926 aa7.91□□□□□ -1.14
LSM5-202ENST00000409292 PDCL3Q9H2J4 239 aa7.91□□□□□ -1.14
LSM5-202ENST00000409292 WDCPQ9H6R7 721 aa7.91□□□□□ -1.14
LSM5-202ENST00000409292 SARDHQ9UL12 918 aa7.91□□□□□ -1.14
LSM5-202ENST00000409292 CA5BQ9Y2D0 317 aa7.91□□□□□ -1.14
LSM5-202ENST00000409292 PCDHB11Q9Y5F2 797 aa7.91□□□□□ -1.14
LSM5-202ENST00000409292 ARID1BQ8NFD5 2236 aaPredicted RBP7.91□□□□□ -1.14
LSM5-202ENST00000409292 FREM2Q5SZK8 3169 aa7.9□□□□□ -1.14
LSM5-202ENST00000409292 SPTY2D1-AS1A0A0U1RR47 76 aa7.9□□□□□ -1.14
LSM5-202ENST00000409292 EME2A4GXA9 379 aaPredicted RBP7.9□□□□□ -1.14
LSM5-202ENST00000409292 E5RJQ4 531 aa7.9□□□□□ -1.14
LSM5-202ENST00000409292 TOR1BO14657 336 aa7.9□□□□□ -1.14
LSM5-202ENST00000409292 ZW10O43264 779 aa7.9□□□□□ -1.14
LSM5-202ENST00000409292 LZTS3O60299 673 aaPredicted RBP7.9□□□□□ -1.14
LSM5-202ENST00000409292 LILRA1O75019 489 aa7.9□□□□□ -1.14
LSM5-202ENST00000409292 TNFSF15O95150 251 aa7.9□□□□□ -1.14
LSM5-202ENST00000409292 ADCY5O95622 1261 aa7.9□□□□□ -1.14
LSM5-202ENST00000409292 ITGA2BP08514 1039 aa7.9□□□□□ -1.14
LSM5-202ENST00000409292 SRCP12931 536 aa7.9□□□□□ -1.14
LSM5-202ENST00000409292 OR1E1P30953 314 aa7.9□□□□□ -1.14
LSM5-202ENST00000409292 NOS2P35228 1153 aa7.9□□□□□ -1.14
LSM5-202ENST00000409292 RPL34P49207 117 aaKnown RBP7.9□□□□□ -1.14
LSM5-202ENST00000409292 NUMBP49757 651 aa7.9□□□□□ -1.14
LSM5-202ENST00000409292 CLDN2P57739 230 aa7.9□□□□□ -1.14
LSM5-202ENST00000409292 CENPCQ03188 943 aa7.9□□□□□ -1.14
LSM5-202ENST00000409292 PDCLQ13371 301 aa7.9□□□□□ -1.14
LSM5-202ENST00000409292 PDE1CQ14123 709 aaPredicted RBP7.9□□□□□ -1.14
LSM5-202ENST00000409292 POLD3Q15054 466 aaPredicted RBP7.9□□□□□ -1.14
LSM5-202ENST00000409292 ZNF542PQ5EBM4 170 aa7.9□□□□□ -1.14
LSM5-202ENST00000409292 BRMS1LQ5PSV4 323 aa7.9□□□□□ -1.14
LSM5-202ENST00000409292 OR6B2Q6IFH4 312 aa7.9□□□□□ -1.14
LSM5-202ENST00000409292 CXorf57Q6NSI4 855 aaKnown RBP7.9□□□□□ -1.14
LSM5-202ENST00000409292 DENND1BQ6P3S1 775 aa7.9□□□□□ -1.14
LSM5-202ENST00000409292 ATG14Q6ZNE5 492 aa7.9□□□□□ -1.14
LSM5-202ENST00000409292 C11orf57Q6ZUT1 292 aaPredicted RBP7.9□□□□□ -1.14
LSM5-202ENST00000409292 CIR1Q86X95 450 aaPredicted RBP7.9□□□□□ -1.14
LSM5-202ENST00000409292 ZDHHC17Q8IUH5 632 aa7.9□□□□□ -1.14
LSM5-202ENST00000409292 RYBPQ8N488 228 aaPredicted RBP7.9□□□□□ -1.14
LSM5-202ENST00000409292 PCDH20Q8N6Y1 951 aaKnown RBP7.9□□□□□ -1.14
LSM5-202ENST00000409292 MSANTD4Q8NCY6 345 aa7.9□□□□□ -1.14
LSM5-202ENST00000409292 DENND6BQ8NEG7 585 aa7.9□□□□□ -1.14
LSM5-202ENST00000409292 OR6C4Q8NGE1 309 aa7.9□□□□□ -1.14
LSM5-202ENST00000409292 ATL2Q8NHH9 583 aa7.9□□□□□ -1.14
LSM5-202ENST00000409292 NANOS1Q8WY41 292 aaKnown RBP7.9□□□□□ -1.14
LSM5-202ENST00000409292 ARRDC3Q96B67 414 aa7.9□□□□□ -1.14
LSM5-202ENST00000409292 MYEOVQ96EZ4 313 aa7.9□□□□□ -1.14
LSM5-202ENST00000409292 ATXN7L3BQ96GX2 97 aa7.9□□□□□ -1.14
LSM5-202ENST00000409292 PPP1R13BQ96KQ4 1090 aa7.9□□□□□ -1.14
LSM5-202ENST00000409292 TMEM74Q96NL1 305 aa7.9□□□□□ -1.14
LSM5-202ENST00000409292 INSM2Q96T92 566 aaPredicted RBP7.9□□□□□ -1.14
LSM5-202ENST00000409292 PRMT1Q99873 361 aaKnown RBP7.9□□□□□ -1.14
LSM5-202ENST00000409292 HEPHQ9BQS7 1158 aa7.9□□□□□ -1.14
LSM5-202ENST00000409292 SPON2Q9BUD6 331 aa7.9□□□□□ -1.14
LSM5-202ENST00000409292 UBE2TQ9NPD8 197 aaPredicted RBP7.9□□□□□ -1.14
LSM5-202ENST00000409292 FZD3Q9NPG1 666 aa7.9□□□□□ -1.14
LSM5-202ENST00000409292 ASCL3Q9NQ33 180 aa7.9□□□□□ -1.14
LSM5-202ENST00000409292 AKAP7Q9P0M2 348 aaPredicted RBP7.9□□□□□ -1.14
LSM5-202ENST00000409292 XPO7Q9UIA9 1087 aaKnown RBP7.9□□□□□ -1.14
LSM5-202ENST00000409292 HPCAL4Q9UM19 191 aa7.9□□□□□ -1.14
LSM5-202ENST00000409292 TBC1D30Q9Y2I9 924 aa7.9□□□□□ -1.14
LSM5-202ENST00000409292 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.9□□□□□ -1.14
LSM5-202ENST00000409292 SETXQ7Z333 2677 aaKnown RBP7.9□□□□□ -1.15
LSM5-202ENST00000409292 SPTA1P02549 2419 aa7.9□□□□□ -1.15
LSM5-202ENST00000409292 RNF225M0QZC1 329 aaPredicted RBP7.89□□□□□ -1.15
LSM5-202ENST00000409292 MUSKO15146 869 aa7.89□□□□□ -1.15
LSM5-202ENST00000409292 AP1G1O43747 822 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms