RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 NCF4Q15080 339 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 CYP2A13Q16696 494 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 BHLHE22Q8NFJ8 381 aaPredicted RBP18.36■□□□□ 0.53
COL18A1-204ENST00000400337 RMND5BQ96G75 393 aaPredicted RBP18.36■□□□□ 0.53
COL18A1-204ENST00000400337 KLHL5Q96PQ7 755 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 RABGEF1Q9UJ41 708 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 KLHL20Q9Y2M5 609 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 CAB39Q9Y376 341 aaPredicted RBP18.36■□□□□ 0.53
COL18A1-204ENST00000400337 ZNF541Q9H0D2 1346 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 PEX1O43933 1283 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 PAGE1O75459 146 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 FSBPO95073 299 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 COX7A2P14406 83 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 PSMB9P28065 219 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 ARL2P36404 184 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 MAPK8P45983 427 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 DEFB115Q30KQ5 88 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 ALFQ53S48 1182 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 ARCQ7LC44 396 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 TTC7BQ86TV6 843 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 MON1AQ86VX9 555 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 MAN1C1Q9NR34 630 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 SNX15Q9NRS6 342 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 STK39Q9UEW8 545 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 GTF2A1LQ9UNN4 478 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 COG5Q9UP83 839 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 C1orf232A0A0U1RR37 186 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 UNC5CO95185 931 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 TNNI3P19429 210 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 GRK4P32298 578 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 TMED10P49755 219 aaKnown RBP18.36■□□□□ 0.53
COL18A1-204ENST00000400337 PREPLQ4J6C6 727 aaPredicted RBP18.36■□□□□ 0.53
COL18A1-204ENST00000400337 RNF43Q68DV7 783 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 STRADAQ7RTN6 431 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 PRRG3Q9BZD7 231 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 ADPRHL2Q9NX46 363 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 LINC00854A0A1B0GVQ3 168 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 SLC9A3R1O14745 358 aaPredicted RBP18.36■□□□□ 0.53
COL18A1-204ENST00000400337 SP100P23497 879 aaPredicted RBP18.36■□□□□ 0.53
COL18A1-204ENST00000400337 CDK18Q07002 472 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 TARBP2Q15633 366 aaKnown RBP18.36■□□□□ 0.53
COL18A1-204ENST00000400337 ATAD3BQ5T9A4 648 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 CHADLQ6NUI6 762 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 ACTRT2Q8TDY3 377 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 TSPAN18Q96SJ8 248 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 TMPRSS4Q9NRS4 437 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 DUSP12Q9UNI6 340 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 SORCS3Q9UPU3 1222 aa18.36■□□□□ 0.53
COL18A1-204ENST00000400337 MSI1O43347 362 aaKnown RBP18.35■□□□□ 0.53
COL18A1-204ENST00000400337 PSMG1O95456 288 aa18.35■□□□□ 0.53
COL18A1-204ENST00000400337 HPCAL1P37235 193 aa18.35■□□□□ 0.53
COL18A1-204ENST00000400337 C1orf127Q8N9H9 656 aa18.35■□□□□ 0.53
COL18A1-204ENST00000400337 OR52K2Q8NGK3 314 aa18.35■□□□□ 0.53
COL18A1-204ENST00000400337 HDAC10Q969S8 669 aa18.35■□□□□ 0.53
COL18A1-204ENST00000400337 MRPL57Q9BQC6 102 aaKnown RBP18.35■□□□□ 0.53
COL18A1-204ENST00000400337 DHX33Q9H6R0 707 aaKnown RBP18.35■□□□□ 0.53
COL18A1-204ENST00000400337 XPR1Q9UBH6 696 aa18.35■□□□□ 0.53
COL18A1-204ENST00000400337 TREHO43280 583 aa18.35■□□□□ 0.53
COL18A1-204ENST00000400337 FAM20BO75063 409 aa18.35■□□□□ 0.53
COL18A1-204ENST00000400337 KRT20P35900 424 aa18.35■□□□□ 0.53
COL18A1-204ENST00000400337 WNT3AP56704 352 aa18.35■□□□□ 0.53
COL18A1-204ENST00000400337 NOMO1Q15155 1222 aa18.35■□□□□ 0.53
COL18A1-204ENST00000400337 BRMS1LQ5PSV4 323 aa18.35■□□□□ 0.53
COL18A1-204ENST00000400337 BNIPLQ7Z465 357 aa18.35■□□□□ 0.53
COL18A1-204ENST00000400337 CSGALNACT1Q8TDX6 532 aa18.35■□□□□ 0.53
COL18A1-204ENST00000400337 CLEC4DQ8WXI8 215 aa18.35■□□□□ 0.53
COL18A1-204ENST00000400337 NDRG1Q92597 394 aaKnown RBP18.35■□□□□ 0.53
COL18A1-204ENST00000400337 PPP1R16AQ96I34 528 aa18.35■□□□□ 0.53
COL18A1-204ENST00000400337 ANKRD27Q96NW4 1050 aa18.35■□□□□ 0.53
COL18A1-204ENST00000400337 EPS8L2Q9H6S3 715 aa18.35■□□□□ 0.53
COL18A1-204ENST00000400337 NCKAP1Q9Y2A7 1128 aa18.35■□□□□ 0.53
COL18A1-204ENST00000400337 C15orf41Q9Y2V0 281 aa18.35■□□□□ 0.53
COL18A1-204ENST00000400337 FFAR3O14843 346 aa18.35■□□□□ 0.53
COL18A1-204ENST00000400337 GPR42O15529 346 aa18.35■□□□□ 0.53
COL18A1-204ENST00000400337 DLGAP3O95886 979 aa18.35■□□□□ 0.53
COL18A1-204ENST00000400337 DRD4P21917 467 aa18.35■□□□□ 0.53
COL18A1-204ENST00000400337 INSCQ1MX18 579 aa18.35■□□□□ 0.53
COL18A1-204ENST00000400337 HJURPQ8NCD3 748 aaPredicted RBP18.35■□□□□ 0.53
COL18A1-204ENST00000400337 PDZD7Q9H5P4 517 aa18.35■□□□□ 0.53
COL18A1-204ENST00000400337 PACSIN3Q9UKS6 424 aa18.35■□□□□ 0.53
COL18A1-204ENST00000400337 AGO1Q9UL18 857 aaKnown RBP18.35■□□□□ 0.53
COL18A1-204ENST00000400337 PAIP2BQ9ULR5 123 aaKnown RBP18.35■□□□□ 0.53
COL18A1-204ENST00000400337 MAFBQ9Y5Q3 323 aaPredicted RBP18.35■□□□□ 0.53
COL18A1-204ENST00000400337 CTPS1P17812 591 aa18.35■□□□□ 0.53
COL18A1-204ENST00000400337 ADRA1BP35368 520 aa18.35■□□□□ 0.53
COL18A1-204ENST00000400337 ARHGAP17Q68EM7 881 aa18.35■□□□□ 0.53
COL18A1-204ENST00000400337 PACS1Q6VY07 963 aa18.35■□□□□ 0.53
COL18A1-204ENST00000400337 CSPG4P5Q96PW8 444 aa18.35■□□□□ 0.53
COL18A1-204ENST00000400337 RICTORQ6R327 1708 aa18.35■□□□□ 0.53
COL18A1-204ENST00000400337 CARNS1A5YM72 827 aa18.34■□□□□ 0.53
COL18A1-204ENST00000400337 OR1D2P34982 312 aa18.34■□□□□ 0.53
COL18A1-204ENST00000400337 PAGE2BQ5JRK9 111 aa18.34■□□□□ 0.53
COL18A1-204ENST00000400337 MON1BQ7L1V2 547 aa18.34■□□□□ 0.53
COL18A1-204ENST00000400337 TRABD2AQ86V40 505 aa18.34■□□□□ 0.53
COL18A1-204ENST00000400337 MRPS23Q9Y3D9 190 aaKnown RBP18.34■□□□□ 0.53
COL18A1-204ENST00000400337 FGD3Q5JSP0 725 aa18.34■□□□□ 0.53
COL18A1-204ENST00000400337 CMC1Q7Z7K0 106 aa18.34■□□□□ 0.53
COL18A1-204ENST00000400337 CCDC103Q8IW40 242 aa18.34■□□□□ 0.53
COL18A1-204ENST00000400337 MECRQ9BV79 373 aa18.34■□□□□ 0.53
COL18A1-204ENST00000400337 ST6GALNAC4Q9H4F1 302 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms