RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 TRIM13O60858 407 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 TBL1XO60907 577 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 SERPINE1P05121 402 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 GSNP06396 782 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 CD48P09326 243 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 CCDC159P0C7I6 412 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 CTPS1P17812 591 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 ERCC2P18074 760 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 PGAM1P18669 254 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 POLR2EP19388 210 aaKnown RBP3.29□□□□□ -1.88
KNL1-202ENST00000399668 GRIA3P42263 894 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 DRG2P55039 364 aaKnown RBP3.29□□□□□ -1.88
KNL1-202ENST00000399668 IL5RAQ01344 420 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 PRKAA1Q13131 559 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 DYNC1I2Q13409 638 aaKnown RBP3.29□□□□□ -1.88
KNL1-202ENST00000399668 SEMA5AQ13591 1074 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 AP5B1Q2VPB7 878 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 ZNF697Q5TEC3 545 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 SNX30Q5VWJ9 437 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 DUPD1Q68J44 220 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 PMF1Q6P1K2 205 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 USP45Q70EL2 814 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 TTC7BQ86TV6 843 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 OR8H2Q8N162 312 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 TMEM86AQ8N2M4 240 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 MAB21L3Q8N8X9 362 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 BHLHE22Q8NFJ8 381 aaPredicted RBP3.29□□□□□ -1.88
KNL1-202ENST00000399668 SPPL2AQ8TCT8 520 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 SH3GL3Q99963 347 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 SEMA3CQ99985 751 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 ZYG11BQ9C0D3 744 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 SNX10Q9Y5X0 201 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 UBIAD1Q9Y5Z9 338 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 SF3B1O75533 1304 aaKnown RBP eCLIP3.29□□□□□ -1.881e-6■■■■■ 71
KNL1-202ENST00000399668 ADGRA3Q8IWK6 1321 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 NLRC5Q86WI3 1866 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 ROBO3Q96MS0 1386 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 ZBTB14O43829 449 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 MAFO75444 373 aaPredicted RBP3.29□□□□□ -1.88
KNL1-202ENST00000399668 FGRP09769 529 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 ELNP15502 786 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 SKIV2L2P42285 1042 aaKnown RBP3.29□□□□□ -1.88
KNL1-202ENST00000399668 MAPK9P45984 424 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 NPY2RP49146 381 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 TUFMP49411 452 aaKnown RBP3.29□□□□□ -1.88
KNL1-202ENST00000399668 SP3Q02447 781 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 RUNX1T1Q06455 604 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 MRPL28Q13084 256 aaKnown RBP3.29□□□□□ -1.88
KNL1-202ENST00000399668 IKBKEQ14164 716 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 FRG1Q14331 258 aaKnown RBP3.29□□□□□ -1.88
KNL1-202ENST00000399668 PSMD5Q16401 504 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 FAM98BQ52LJ0 330 aaKnown RBP3.29□□□□□ -1.88
KNL1-202ENST00000399668 NOMO2Q5JPE7 1267 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 NEPROQ6NW34 567 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 DOK6Q6PKX4 331 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 FAM180AQ6UWF9 173 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 PLPPR4Q7Z2D5 763 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 EFL1Q7Z2Z2 1120 aaKnown RBP3.29□□□□□ -1.88
KNL1-202ENST00000399668 NECAB2Q7Z6G3 386 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 LDB1Q86U70 411 aaPredicted RBP3.29□□□□□ -1.88
KNL1-202ENST00000399668 SAPCD2Q86UD0 394 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 ZDHHC13Q8IUH4 622 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 ATXN2LQ8WWM7 1075 aaKnown RBP3.29□□□□□ -1.88
KNL1-202ENST00000399668 TNFRSF25Q93038 417 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 TMEM159Q96B96 161 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 HIC2Q96JB3 615 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 MLPHQ9BV36 600 aaPredicted RBP3.29□□□□□ -1.88
KNL1-202ENST00000399668 COPS7BQ9H9Q2 264 aaPredicted RBP3.29□□□□□ -1.88
KNL1-202ENST00000399668 RHBDL2Q9NX52 303 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 PLK2Q9NYY3 685 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 KLQ9UEF7 1012 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 STARD13Q9Y3M8 1113 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 RAD54BQ9Y620 910 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 NCKAP5O14513 1909 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 KIAA1551Q9HCM1 1747 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 RGPD3A6NKT7 1758 aaPredicted RBP3.29□□□□□ -1.88
KNL1-202ENST00000399668 RGPD4Q7Z3J3 1758 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 A0A1W2PPM1 405 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 MAGEA13PA6NCF6 341 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 MSI1O43347 362 aaKnown RBP3.29□□□□□ -1.88
KNL1-202ENST00000399668 PAGE1O75459 146 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 RPLP2P05387 115 aaKnown RBP3.29□□□□□ -1.88
KNL1-202ENST00000399668 HNRNPLP14866 589 aaKnown RBP eCLIP3.29□□□□□ -1.88
KNL1-202ENST00000399668 NOS3P29474 1203 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 RRM2P31350 389 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 NOMO3P69849 1222 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 NCF4Q15080 339 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 KCNA10Q16322 511 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 ALFQ53S48 1182 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 FAM182AQ5T1J6 154 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 CERCAMQ5T4B2 595 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 RHBDF2Q6PJF5 856 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 LPCAT2Q7L5N7 544 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 STK32CQ86UX6 486 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 PACS2Q86VP3 889 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 STX19Q8N4C7 294 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 PIK3R5Q8WYR1 880 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 MYLPFQ96A32 169 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 CCDC3Q9BQI4 270 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 DPY30Q9C005 99 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms