RNA–Protein interactions for RNA: ENST00000398452.6

SKA1-202, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA1, Length 979 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-202ENST00000398452 FBXO10Q9UK96 956 aa14.43□□□□□ -0.1
SKA1-202ENST00000398452 NFU1Q9UMS0 254 aa14.43□□□□□ -0.1
SKA1-202ENST00000398452 OR51B4Q9Y5P0 310 aa14.43□□□□□ -0.1
SKA1-202ENST00000398452 NUP205Q92621 2012 aa14.42□□□□□ -0.1
SKA1-202ENST00000398452 MYO10Q9HD67 2058 aa14.42□□□□□ -0.1
SKA1-202ENST00000398452 F5H423 210 aaPredicted RBP14.42□□□□□ -0.1
SKA1-202ENST00000398452 METTL18O95568 372 aa14.42□□□□□ -0.1
SKA1-202ENST00000398452 SRPRAP08240 638 aaKnown RBP14.42□□□□□ -0.1
SKA1-202ENST00000398452 SERPINF2P08697 491 aa14.42□□□□□ -0.1
SKA1-202ENST00000398452 TPSB2P20231 275 aa14.42□□□□□ -0.1
SKA1-202ENST00000398452 GRIA2P42262 883 aa14.42□□□□□ -0.1
SKA1-202ENST00000398452 CARSP49589 748 aaKnown RBP14.42□□□□□ -0.1
SKA1-202ENST00000398452 SNRPD1P62314 119 aaKnown RBP14.42□□□□□ -0.1
SKA1-202ENST00000398452 VSNL1P62760 191 aa14.42□□□□□ -0.1
SKA1-202ENST00000398452 MPP3Q13368 585 aa14.42□□□□□ -0.1
SKA1-202ENST00000398452 SEMA5AQ13591 1074 aa14.42□□□□□ -0.1
SKA1-202ENST00000398452 DSG2Q14126 1118 aa14.42□□□□□ -0.1
SKA1-202ENST00000398452 TPSAB1Q15661 275 aa14.42□□□□□ -0.1
SKA1-202ENST00000398452 RALGPS1Q5JS13 557 aa14.42□□□□□ -0.1
SKA1-202ENST00000398452 NAPEPLDQ6IQ20 393 aa14.42□□□□□ -0.1
SKA1-202ENST00000398452 CCNI2Q6ZMN8 369 aaPredicted RBP14.42□□□□□ -0.1
SKA1-202ENST00000398452 LINC00523Q86TU6 105 aa14.42□□□□□ -0.1
SKA1-202ENST00000398452 ETFBKMTQ8IXQ9 262 aa14.42□□□□□ -0.1
SKA1-202ENST00000398452 PDIK1LQ8N165 341 aa14.42□□□□□ -0.1
SKA1-202ENST00000398452 SLC44A3Q8N4M1 653 aa14.42□□□□□ -0.1
SKA1-202ENST00000398452 TTC17Q96AE7 1141 aa14.42□□□□□ -0.1
SKA1-202ENST00000398452 ALG14Q96F25 216 aa14.42□□□□□ -0.1
SKA1-202ENST00000398452 P2RY13Q9BPV8 354 aa14.42□□□□□ -0.1
SKA1-202ENST00000398452 CEP44Q9C0F1 390 aa14.42□□□□□ -0.1
SKA1-202ENST00000398452 LRRC40Q9H9A6 602 aa14.42□□□□□ -0.1
SKA1-202ENST00000398452 TRPV5Q9NQA5 729 aa14.42□□□□□ -0.1
SKA1-202ENST00000398452 EIF2B3Q9NR50 452 aaKnown RBP14.42□□□□□ -0.1
SKA1-202ENST00000398452 VPS45Q9NRW7 570 aa14.42□□□□□ -0.1
SKA1-202ENST00000398452 ELOVL2Q9NXB9 296 aa14.42□□□□□ -0.1
SKA1-202ENST00000398452 FAM153AQ9UHL3 310 aa14.42□□□□□ -0.1
SKA1-202ENST00000398452 RAB21Q9UL25 225 aa14.42□□□□□ -0.1
SKA1-202ENST00000398452 ATP8A1Q9Y2Q0 1164 aa14.42□□□□□ -0.1
SKA1-202ENST00000398452 DOCK8Q8NF50 2099 aa14.42□□□□□ -0.1
SKA1-202ENST00000398452 CCDC151A5D8V7 595 aa14.41□□□□□ -0.1
SKA1-202ENST00000398452 ZMPSTE24O75844 475 aa14.41□□□□□ -0.1
SKA1-202ENST00000398452 PEX11BO96011 259 aa14.41□□□□□ -0.1
SKA1-202ENST00000398452 DLDP09622 509 aaKnown RBP14.41□□□□□ -0.1
SKA1-202ENST00000398452 CISD3P0C7P0 127 aa14.41□□□□□ -0.1
SKA1-202ENST00000398452 SLC6A11P48066 632 aa14.41□□□□□ -0.1
SKA1-202ENST00000398452 SCNN1BP51168 640 aa14.41□□□□□ -0.1
SKA1-202ENST00000398452 ARL4CP56559 192 aa14.41□□□□□ -0.1
SKA1-202ENST00000398452 MAXP61244 160 aa14.41□□□□□ -0.1
SKA1-202ENST00000398452 TDGQ13569 410 aa14.41□□□□□ -0.1
SKA1-202ENST00000398452 GEN1Q17RS7 908 aa14.41□□□□□ -0.1
SKA1-202ENST00000398452 FNDC3BQ53EP0 1204 aaKnown RBP14.41□□□□□ -0.1
SKA1-202ENST00000398452 RNASEH2BQ5TBB1 312 aaKnown RBP14.41□□□□□ -0.1
SKA1-202ENST00000398452 HIBCHQ6NVY1 386 aaPredicted RBP14.41□□□□□ -0.1
SKA1-202ENST00000398452 CENPUQ71F23 418 aa14.41□□□□□ -0.1
SKA1-202ENST00000398452 CCDC25Q86WR0 208 aa14.41□□□□□ -0.1
SKA1-202ENST00000398452 C12orf40Q86WS4 652 aa14.41□□□□□ -0.1
SKA1-202ENST00000398452 RALGPS2Q86X27 583 aaPredicted RBP14.41□□□□□ -0.1
SKA1-202ENST00000398452 CNTD1Q8N815 330 aa14.41□□□□□ -0.1
SKA1-202ENST00000398452 DNAAF3Q8N9W5 541 aa14.41□□□□□ -0.1
SKA1-202ENST00000398452 TERB1Q8NA31 727 aa14.41□□□□□ -0.1
SKA1-202ENST00000398452 CPT1BQ92523 772 aa14.41□□□□□ -0.1
SKA1-202ENST00000398452 EDAQ92838 391 aa14.41□□□□□ -0.1
SKA1-202ENST00000398452 ART4Q93070 314 aa14.41□□□□□ -0.1
SKA1-202ENST00000398452 IFT43Q96FT9 208 aa14.41□□□□□ -0.1
SKA1-202ENST00000398452 MSANTD3Q96H12 275 aa14.41□□□□□ -0.1
SKA1-202ENST00000398452 LMLNQ96KR4 655 aa14.41□□□□□ -0.1
SKA1-202ENST00000398452 RPL10LQ96L21 214 aaKnown RBP14.41□□□□□ -0.1
SKA1-202ENST00000398452 GDAP1L1Q96MZ0 367 aa14.41□□□□□ -0.1
SKA1-202ENST00000398452 SEMA3CQ99985 751 aa14.41□□□□□ -0.1
SKA1-202ENST00000398452 XAB2Q9HCS7 855 aaKnown RBP14.41□□□□□ -0.1
SKA1-202ENST00000398452 INTS6Q9UL03 887 aaKnown RBP14.41□□□□□ -0.1
SKA1-202ENST00000398452 ERVW-1Q9UQF0 538 aa14.41□□□□□ -0.1
SKA1-202ENST00000398452 HS3ST2Q9Y278 367 aa14.41□□□□□ -0.1
SKA1-202ENST00000398452 FCF1Q9Y324 198 aaKnown RBP14.41□□□□□ -0.1
SKA1-202ENST00000398452 TMEM221A6NGB7 291 aa14.4□□□□□ -0.1
SKA1-202ENST00000398452 M0R296 226 aa14.4□□□□□ -0.1
SKA1-202ENST00000398452 INSIG1O15503 277 aa14.4□□□□□ -0.1
SKA1-202ENST00000398452 BNIP3LO60238 219 aa14.4□□□□□ -0.1
SKA1-202ENST00000398452 KAT7O95251 611 aa14.4□□□□□ -0.1
SKA1-202ENST00000398452 AP2A1O95782 977 aa14.4□□□□□ -0.1
SKA1-202ENST00000398452 ASGR2P07307 311 aa14.4□□□□□ -0.1
SKA1-202ENST00000398452 SRCP12931 536 aa14.4□□□□□ -0.1
SKA1-202ENST00000398452 CD68P34810 354 aaPredicted RBP14.4□□□□□ -0.1
SKA1-202ENST00000398452 CD86P42081 329 aa14.4□□□□□ -0.1
SKA1-202ENST00000398452 AP1S1P61966 158 aa14.4□□□□□ -0.1
SKA1-202ENST00000398452 ZXDAP98168 799 aa14.4□□□□□ -0.1
SKA1-202ENST00000398452 NSUN2Q08J23 767 aaKnown RBP eCLIP14.4□□□□□ -0.1
SKA1-202ENST00000398452 KCNJ11Q14654 390 aa14.4□□□□□ -0.1
SKA1-202ENST00000398452 SLMAPQ14BN4 828 aa14.4□□□□□ -0.1
SKA1-202ENST00000398452 CYTH1Q15438 398 aa14.4□□□□□ -0.1
SKA1-202ENST00000398452 KCTD19Q17RG1 926 aaPredicted RBP14.4□□□□□ -0.1
SKA1-202ENST00000398452 DNAJC21Q5F1R6 531 aaKnown RBP14.4□□□□□ -0.1
SKA1-202ENST00000398452 CFAP58Q5T655 872 aa14.4□□□□□ -0.1
SKA1-202ENST00000398452 EMBQ6PCB8 327 aa14.4□□□□□ -0.1
SKA1-202ENST00000398452 TRIM67Q6ZTA4 783 aa14.4□□□□□ -0.1
SKA1-202ENST00000398452 KIAA0907Q7Z7F0 614 aaPredicted RBP14.4□□□□□ -0.1
SKA1-202ENST00000398452 ADIPOR2Q86V24 386 aa14.4□□□□□ -0.1
SKA1-202ENST00000398452 SH2D3CQ8N5H7 860 aa14.4□□□□□ -0.1
SKA1-202ENST00000398452 PCDH20Q8N6Y1 951 aaKnown RBP14.4□□□□□ -0.1
SKA1-202ENST00000398452 NAT8LQ8N9F0 302 aa14.4□□□□□ -0.1
SKA1-202ENST00000398452 TSEN2Q8NCE0 465 aaKnown RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms