RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 RIT2Q99578 217 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 ZBED2Q9BTP6 218 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 LIN7BQ9HAP6 207 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 NOD2Q9HC29 1040 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 IGKV6D-41A0A0C4DH26 115 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 RAB19A4D1S5 217 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 ARGFXA6NJG6 315 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 GABRDO14764 452 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 SEMA3DO95025 777 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 MYBL1P10243 752 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 DRD4P21917 467 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 PDHA2P29803 388 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 GSSP48637 474 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 FMO5P49326 533 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 GTF2IP78347 998 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 GABPAQ06546 454 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 XRCC4Q13426 336 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 ZNF783Q6ZMS7 281 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 C16orf59Q7L2K0 433 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 EPM2AIP1Q7L775 607 aaPredicted RBP6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 ADAT2Q7Z6V5 191 aaKnown RBP6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 TPRA1Q86W33 373 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 C1orf216Q8TAB5 229 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 ZNF461Q8TAF7 563 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 HEXDCQ8WVB3 486 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 CCM2Q9BSQ5 444 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 OSBPL7Q9BZF2 842 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 WNT8AQ9H1J5 351 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 ITM2CQ9NQX7 267 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 STX18Q9P2W9 335 aaKnown RBP6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 KLHL3Q9UH77 587 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 HCN2Q9UL51 889 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 ENTPD4Q9Y227 616 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 SNX24Q9Y343 169 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 A0A1W2PPH5 198 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 TMEM120BA0PK00 339 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 PIK3CDO00329 1044 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 PROM1O43490 865 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 PI15O43692 258 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 PLA2G6O60733 806 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 LRG1P02750 347 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 PSAPP07602 524 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 RPS17P08708 135 aaKnown RBP6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 SLC15A1P46059 708 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 PLS1Q14651 629 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 DUPD1Q68J44 220 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 PDZD4Q76G19 769 aaPredicted RBP6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 MIER3Q7Z3K6 550 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 FBXO11Q86XK2 927 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 MIB1Q86YT6 1006 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 CCDC105Q8IYK2 499 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 REM2Q8IYK8 340 aaPredicted RBP6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 GPC2Q8N158 579 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 ZNF671Q8TAW3 534 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 SLC5A11Q8WWX8 675 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 IFT43Q96FT9 208 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 HHIPL1Q96JK4 782 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 MBOAT7Q96N66 472 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 OR51B5Q9H339 312 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 SUV39H2Q9H5I1 410 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 NRBP2Q9NSY0 501 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 APEX2Q9UBZ4 518 aa6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 CNOT8Q9UFF9 292 aaKnown RBP6.68□□□□□ -1.34
TM9SF4-202ENST00000398022 A0A1W2PPL8 197 aa6.67□□□□□ -1.34
TM9SF4-202ENST00000398022 A6NLC8 198 aa6.67□□□□□ -1.34
TM9SF4-202ENST00000398022 YDJCA8MPS7 323 aa6.67□□□□□ -1.34
TM9SF4-202ENST00000398022 BACH1O14867 736 aa6.67□□□□□ -1.34
TM9SF4-202ENST00000398022 EDIL3O43854 480 aa6.67□□□□□ -1.34
TM9SF4-202ENST00000398022 EXOC3O60645 756 aa6.67□□□□□ -1.34
TM9SF4-202ENST00000398022 PPP1R11O60927 126 aaPredicted RBP6.67□□□□□ -1.34
TM9SF4-202ENST00000398022 KRT16P08779 473 aa6.67□□□□□ -1.34
TM9SF4-202ENST00000398022 CYP3A5P20815 502 aa6.67□□□□□ -1.34
TM9SF4-202ENST00000398022 OSBPP22059 807 aa6.67□□□□□ -1.34
TM9SF4-202ENST00000398022 GSTM2P28161 218 aa6.67□□□□□ -1.34
TM9SF4-202ENST00000398022 SHMT1P34896 483 aa6.67□□□□□ -1.34
TM9SF4-202ENST00000398022 SLC9A3P48764 834 aa6.67□□□□□ -1.34
TM9SF4-202ENST00000398022 CASP4P49662 377 aa6.67□□□□□ -1.34
TM9SF4-202ENST00000398022 RAP1GDS1P52306 607 aa6.67□□□□□ -1.34
TM9SF4-202ENST00000398022 PTPN5P54829 565 aa6.67□□□□□ -1.34
TM9SF4-202ENST00000398022 QPCTQ16769 361 aa6.67□□□□□ -1.34
TM9SF4-202ENST00000398022 CCDC58Q4VC31 144 aa6.67□□□□□ -1.34
TM9SF4-202ENST00000398022 PERM1Q5SV97 790 aa6.67□□□□□ -1.34
TM9SF4-202ENST00000398022 PTRHD1Q6GMV3 140 aaKnown RBP6.67□□□□□ -1.34
TM9SF4-202ENST00000398022 CLEC10AQ8IUN9 316 aa6.67□□□□□ -1.34
TM9SF4-202ENST00000398022 MCEMP1Q8IX19 187 aa6.67□□□□□ -1.34
TM9SF4-202ENST00000398022 SLC43A2Q8N370 569 aa6.67□□□□□ -1.34
TM9SF4-202ENST00000398022 DPP10Q8N608 796 aa6.67□□□□□ -1.34
TM9SF4-202ENST00000398022 LHX5Q9H2C1 402 aa6.67□□□□□ -1.34
TM9SF4-202ENST00000398022 GINS2Q9Y248 185 aa6.67□□□□□ -1.34
TM9SF4-202ENST00000398022 MSRB2Q9Y3D2 182 aa6.67□□□□□ -1.34
TM9SF4-202ENST00000398022 PCDHGA10Q9Y5H3 936 aa6.67□□□□□ -1.34
TM9SF4-202ENST00000398022 ASTN1O14525 1302 aa6.67□□□□□ -1.34
TM9SF4-202ENST00000398022 K7ERQ8 282 aa6.67□□□□□ -1.34
TM9SF4-202ENST00000398022 RIMBP2O15034 1052 aa6.67□□□□□ -1.34
TM9SF4-202ENST00000398022 ZBTB24O43167 697 aaPredicted RBP6.67□□□□□ -1.34
TM9SF4-202ENST00000398022 CBR3O75828 277 aa6.67□□□□□ -1.34
TM9SF4-202ENST00000398022 SUN1O94901 812 aa6.67□□□□□ -1.34
TM9SF4-202ENST00000398022 ATP6V1G2O95670 118 aa6.67□□□□□ -1.34
TM9SF4-202ENST00000398022 PRPS2P11908 318 aa6.67□□□□□ -1.34
TM9SF4-202ENST00000398022 SP100P23497 879 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms