RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 HSFY1Q96LI6 401 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 SPOCK3Q9BQ16 436 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 EBF4Q9BQW3 602 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 CUEDC1Q9NWM3 386 aaPredicted RBP8.53□□□□□ -1.04
NDE1-202ENST00000396355 SLC24A2Q9UI40 661 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 PTBP2Q9UKA9 531 aaKnown RBP8.53□□□□□ -1.04
NDE1-202ENST00000396355 YARS2Q9Y2Z4 477 aaKnown RBP8.53□□□□□ -1.04
NDE1-202ENST00000396355 PCDHGA10Q9Y5H3 936 aa8.53□□□□□ -1.04
NDE1-202ENST00000396355 CYB561D2O14569 222 aa8.52□□□□□ -1.04
NDE1-202ENST00000396355 CRCPO75575 148 aa8.52□□□□□ -1.04
NDE1-202ENST00000396355 IFNA16P05015 189 aa8.52□□□□□ -1.04
NDE1-202ENST00000396355 HLA-DPA1P20036 260 aa8.52□□□□□ -1.04
NDE1-202ENST00000396355 ME2P23368 584 aa8.52□□□□□ -1.04
NDE1-202ENST00000396355 GJA5P36382 358 aa8.52□□□□□ -1.04
NDE1-202ENST00000396355 OR2B6P58173 313 aa8.52□□□□□ -1.04
NDE1-202ENST00000396355 GPX6P59796 221 aa8.52□□□□□ -1.04
NDE1-202ENST00000396355 CA9Q16790 459 aa8.52□□□□□ -1.04
NDE1-202ENST00000396355 SPDYAQ5MJ70 313 aa8.52□□□□□ -1.04
NDE1-202ENST00000396355 ODR4Q5SWX8 454 aa8.52□□□□□ -1.04
NDE1-202ENST00000396355 CGB2Q6NT52 195 aa8.52□□□□□ -1.04
NDE1-202ENST00000396355 RWDD4Q6NW29 188 aaKnown RBP8.52□□□□□ -1.04
NDE1-202ENST00000396355 CYP2U1Q7Z449 544 aa8.52□□□□□ -1.04
NDE1-202ENST00000396355 RBM23Q86U06 439 aaKnown RBP8.52□□□□□ -1.04
NDE1-202ENST00000396355 RASGEF1CQ8N431 466 aa8.52□□□□□ -1.04
NDE1-202ENST00000396355 PJA1Q8NG27 643 aa8.52□□□□□ -1.04
NDE1-202ENST00000396355 ANKRD49Q8WVL7 239 aa8.52□□□□□ -1.04
NDE1-202ENST00000396355 FAM151AQ8WW52 585 aa8.52□□□□□ -1.04
NDE1-202ENST00000396355 ATP6V1E2Q96A05 226 aa8.52□□□□□ -1.04
NDE1-202ENST00000396355 IFT43Q96FT9 208 aa8.52□□□□□ -1.04
NDE1-202ENST00000396355 DCLK3Q9C098 648 aa8.52□□□□□ -1.04
NDE1-202ENST00000396355 NUAK2Q9H093 628 aa8.52□□□□□ -1.04
NDE1-202ENST00000396355 KLC2Q9H0B6 622 aa8.52□□□□□ -1.04
NDE1-202ENST00000396355 UNC93B1Q9H1C4 597 aa8.52□□□□□ -1.04
NDE1-202ENST00000396355 C17orf75Q9HAS0 396 aa8.52□□□□□ -1.04
NDE1-202ENST00000396355 KLHL3Q9UH77 587 aa8.52□□□□□ -1.04
NDE1-202ENST00000396355 COG5Q9UP83 839 aa8.52□□□□□ -1.04
NDE1-202ENST00000396355 GTPBP10A4D1E9 387 aaKnown RBP8.52□□□□□ -1.05
NDE1-202ENST00000396355 CENPBD1B2RD01 187 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 F8W810 466 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 M0QX08 132 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 INHAP05111 366 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 ETS1P14921 441 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 TTKP33981 857 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 GPD2P43304 727 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 FMO5P49326 533 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 OLR1P78380 273 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 ACAP2Q15057 778 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 ZDHHC24Q6UX98 284 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 DGLUCYQ7Z3D6 616 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 HAUS6Q7Z4H7 955 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 LUZP2Q86TE4 346 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 ARMC8Q8IUR7 673 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 BCL7CQ8WUZ0 217 aaPredicted RBP8.52□□□□□ -1.05
NDE1-202ENST00000396355 LRTOMTQ8WZ04 291 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 RIT1Q92963 219 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 HDAC11Q96DB2 347 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 MMP19Q99542 508 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 ZSWIM1Q9BR11 485 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 SLC4A5Q9BY07 1137 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 WDR12Q9GZL7 423 aaKnown RBP8.52□□□□□ -1.05
NDE1-202ENST00000396355 NAA50Q9GZZ1 169 aaKnown RBP8.52□□□□□ -1.05
NDE1-202ENST00000396355 GPAMQ9HCL2 828 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 EHD3Q9NZN3 535 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 RAB26Q9ULW5 256 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 HSPB11Q9Y547 144 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 PCDHGA7Q9Y5G6 932 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 ORC6Q9Y5N6 252 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 CEPT1Q9Y6K0 416 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 TMEM191CA6NGB0 347 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 ATE1O95260 518 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 GJB1P08034 283 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 ARP10275 920 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 HMGCS2P54868 508 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 ABCE1P61221 599 aaKnown RBP8.52□□□□□ -1.05
NDE1-202ENST00000396355 MYL7Q01449 175 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 FAAP100Q0VG06 881 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 EPS8Q12929 822 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 CMPK2Q5EBM0 449 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 COLEC12Q5KU26 742 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 SPANXN2Q5MJ10 180 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 UGT3A1Q6NUS8 523 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 FAM122CQ6P4D5 195 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 RASSF6Q6ZTQ3 369 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 DEFB123Q8N688 67 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 FBXO36Q8NEA4 188 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 MCFD2Q8NI22 146 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 LMO3Q8TAP4 145 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 JPH3Q8WXH2 748 aaPredicted RBP8.52□□□□□ -1.05
NDE1-202ENST00000396355 ARMC5Q96C12 935 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 NECTIN4Q96NY8 510 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 KIFC3Q9BVG8 833 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 ASPSCR1Q9BZE9 553 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 MCCC2Q9HCC0 563 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 SLC38A7Q9NVC3 462 aa8.52□□□□□ -1.05
NDE1-202ENST00000396355 A0A0G2JPF8 293 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 ISPDA4D126 451 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 HNRNPCL3B7ZW38 293 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 DDX3YO15523 660 aaKnown RBP8.51□□□□□ -1.05
NDE1-202ENST00000396355 MED26O95402 600 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 FOSP01100 380 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms