RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 MYLKQ15746 1914 aa12.3□□□□□ -0.44
ITGB1-202ENST00000396033 TTC24A2A3L6 582 aaPredicted RBP12.29□□□□□ -0.44
ITGB1-202ENST00000396033 IRF1P10914 325 aa12.29□□□□□ -0.44
ITGB1-202ENST00000396033 PAMP19021 973 aa12.29□□□□□ -0.44
ITGB1-202ENST00000396033 VEPH1Q14D04 833 aa12.29□□□□□ -0.44
ITGB1-202ENST00000396033 INSCQ1MX18 579 aa12.29□□□□□ -0.44
ITGB1-202ENST00000396033 RABGAP1LQ5R372 815 aa12.29□□□□□ -0.44
ITGB1-202ENST00000396033 TMCO4Q5TGY1 634 aa12.29□□□□□ -0.44
ITGB1-202ENST00000396033 KLHDC10Q6PID8 442 aa12.29□□□□□ -0.44
ITGB1-202ENST00000396033 ZCCHC23Q6ZST2 131 aa12.29□□□□□ -0.44
ITGB1-202ENST00000396033 PLD4Q96BZ4 506 aa12.29□□□□□ -0.44
ITGB1-202ENST00000396033 HSFX1Q9UBD0 423 aa12.29□□□□□ -0.44
ITGB1-202ENST00000396033 ZFP37Q9Y6Q3 630 aaPredicted RBP12.29□□□□□ -0.44
ITGB1-202ENST00000396033 PRRG1O14668 218 aa12.29□□□□□ -0.44
ITGB1-202ENST00000396033 LAG3P18627 525 aa12.29□□□□□ -0.44
ITGB1-202ENST00000396033 CORO1AP31146 461 aaKnown RBP12.29□□□□□ -0.44
ITGB1-202ENST00000396033 ARFIP2P53365 341 aa12.29□□□□□ -0.44
ITGB1-202ENST00000396033 ZNF235Q14590 738 aa12.29□□□□□ -0.44
ITGB1-202ENST00000396033 PGBD5Q8N414 524 aa12.29□□□□□ -0.44
ITGB1-202ENST00000396033 AUTS2Q8WXX7 1259 aa12.29□□□□□ -0.44
ITGB1-202ENST00000396033 C7orf26Q96N11 449 aa12.29□□□□□ -0.44
ITGB1-202ENST00000396033 A0A096LPK6 155 aa12.29□□□□□ -0.44
ITGB1-202ENST00000396033 PRAMEF11O60813 436 aa12.29□□□□□ -0.44
ITGB1-202ENST00000396033 MPOP05164 745 aa12.29□□□□□ -0.44
ITGB1-202ENST00000396033 MMP2P08253 660 aa12.29□□□□□ -0.44
ITGB1-202ENST00000396033 THOC5Q13769 683 aaKnown RBP12.29□□□□□ -0.44
ITGB1-202ENST00000396033 DLG2Q15700 870 aa12.29□□□□□ -0.44
ITGB1-202ENST00000396033 DBN1Q16643 649 aa12.29□□□□□ -0.44
ITGB1-202ENST00000396033 CES4AQ5XG92 561 aa12.29□□□□□ -0.44
ITGB1-202ENST00000396033 TMEM120AQ9BXJ8 343 aa12.29□□□□□ -0.44
ITGB1-202ENST00000396033 PRKD2Q9BZL6 878 aa12.29□□□□□ -0.44
ITGB1-202ENST00000396033 TMEM216Q9P0N5 145 aa12.29□□□□□ -0.44
ITGB1-202ENST00000396033 SLC39A10Q9ULF5 831 aa12.29□□□□□ -0.44
ITGB1-202ENST00000396033 LTBP2Q14767 1821 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 PROCP04070 461 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 CSF2RAP15509 400 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 KCNA4P22459 653 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 SERPINH1P50454 418 aaKnown RBP12.28□□□□□ -0.44
ITGB1-202ENST00000396033 TWF1Q12792 350 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 STX3Q13277 289 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 GRM3Q14832 879 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 CNGA3Q16281 694 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 C5orf22Q49AR2 442 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 ZNF333Q96JL9 665 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 MYRFLQ96LU7 910 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 ZNF570Q96NI8 536 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 MCMBPQ9BTE3 642 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 RHOJQ9H4E5 214 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 RC3H2Q9HBD1 1191 aaKnown RBP12.28□□□□□ -0.44
ITGB1-202ENST00000396033 GKN1Q9NS71 199 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 ZNF358Q9NW07 568 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 SPG21Q9NZD8 308 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 PCDH10Q9P2E7 1040 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 UXTQ9UBK9 157 aaPredicted RBP12.28□□□□□ -0.44
ITGB1-202ENST00000396033 L3MBTL1Q9Y468 752 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 MIA3Q5JRA6 1907 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 A0A0D9SEW6 157 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 HEATR9A2RTY3 570 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 SAT1P21673 171 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 ARNTP27540 789 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 CDH4P55283 916 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 RPS24P62847 133 aaKnown RBP12.28□□□□□ -0.44
ITGB1-202ENST00000396033 MPP1Q00013 466 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 OCRLQ01968 901 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 TNK2Q07912 1038 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 UGP2Q16851 508 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 LRRC26Q2I0M4 334 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 ZC3HC1Q86WB0 502 aaKnown RBP12.28□□□□□ -0.44
ITGB1-202ENST00000396033 DENND6AQ8IWF6 608 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 CNTN4Q8IWV2 1026 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 ACVR1CQ8NER5 493 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 PRICKLE1Q96MT3 831 aaPredicted RBP12.28□□□□□ -0.44
ITGB1-202ENST00000396033 POLR1EQ9GZS1 481 aaKnown RBP12.28□□□□□ -0.44
ITGB1-202ENST00000396033 ARNT2Q9HBZ2 717 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 ATP13A1Q9HD20 1204 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 TREX1Q9NSU2 369 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 ZFP69BQ9UJL9 534 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 C2orf78A6NCI8 922 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 STC2O76061 302 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 GSRP00390 522 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 ITGB8P26012 769 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 ARCN1P48444 511 aaKnown RBP12.28□□□□□ -0.44
ITGB1-202ENST00000396033 WDR5P61964 334 aaKnown RBP12.28□□□□□ -0.44
ITGB1-202ENST00000396033 ELF3P78545 371 aaPredicted RBP12.28□□□□□ -0.44
ITGB1-202ENST00000396033 IRF9Q00978 393 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 GNA12Q03113 381 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 PCLAFQ15004 111 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 IL31Q6EBC2 164 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 KIAA0930Q6ICG6 404 aaPredicted RBP12.28□□□□□ -0.44
ITGB1-202ENST00000396033 RAPH1Q70E73 1250 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 MTDHQ86UE4 582 aaKnown RBP12.28□□□□□ -0.44
ITGB1-202ENST00000396033 CRLF3Q8IUI8 442 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 OR7D4Q8NG98 312 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 ARRDC2Q8TBH0 407 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 GPR22Q99680 433 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 SEMA3CQ99985 751 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 ZNF395Q9H8N7 513 aaPredicted RBP12.28□□□□□ -0.44
ITGB1-202ENST00000396033 TXLNGQ9NUQ3 528 aa12.28□□□□□ -0.44
ITGB1-202ENST00000396033 SNNO75324 88 aaPredicted RBP12.27□□□□□ -0.44
ITGB1-202ENST00000396033 PRKCGP05129 697 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms