RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 PRKCBP05771 671 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 CSN2P05814 226 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 MTM1Q13496 603 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 GLRA4Q5JXX5 417 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 FUKQ8N0W3 1084 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 CIDECQ96AQ7 238 aaPredicted RBP13.54□□□□□ -0.24
USP49-203ENST00000394253 PAK6Q9NQU5 681 aaPredicted RBP13.54□□□□□ -0.24
USP49-203ENST00000394253 KCNH4Q9UQ05 1017 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 SASH3O75995 380 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 CCNYL3P0C7X3 344 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 RPL6Q02878 288 aaKnown RBP13.54□□□□□ -0.24
USP49-203ENST00000394253 H3BM21 787 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 CST1P01037 141 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 KCNMB4Q86W47 210 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 TCEAL3Q969E4 200 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 EXOC2Q96KP1 924 aa13.54□□□□□ -0.24
USP49-203ENST00000394253 SENP6Q9GZR1 1112 aaPredicted RBP13.54□□□□□ -0.24
USP49-203ENST00000394253 C5orf51A6NDU8 294 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 UGT2B17O75795 530 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 CYP2C9P11712 490 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 NOTUMQ6P988 496 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 MILR1Q7Z6M3 343 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 POC1BQ8TC44 478 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 FUT8Q9BYC5 575 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 LRMDAQ9H2I8 198 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 OPTCQ9UBM4 332 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 CLCA1A8K7I4 914 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 OR10H3O60404 316 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 TIPRLO75663 272 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 CLPXO76031 633 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 CXCR2P25025 360 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 SPIBQ01892 262 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 RASGEF1BQ0VAM2 473 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 MKRN4PQ13434 485 aaPredicted RBP13.53□□□□□ -0.24
USP49-203ENST00000394253 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.53□□□□□ -0.246e-7■■■■■ 139.2
USP49-203ENST00000394253 MMP19Q99542 508 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 NOTOA8MTQ0 251 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 MTHFD1P11586 935 aaKnown RBP13.53□□□□□ -0.24
USP49-203ENST00000394253 PPP3R1P63098 170 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 FOLH1Q04609 750 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 FAM189A2Q15884 450 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 HSDL1Q3SXM5 330 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 CWF19L1Q69YN2 538 aaKnown RBP13.53□□□□□ -0.24
USP49-203ENST00000394253 OR5J2Q8NH18 312 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 FNDC11Q9BVV2 318 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 MAPKBP1O60336 1514 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 PTCH1Q13635 1447 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 MLYCDO95822 493 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 FESP07332 822 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 AMPD2Q01433 879 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 GPR162Q16538 588 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 CBWD3Q5JTY5 395 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 CBWD5Q5RIA9 395 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 CHST15Q7LFX5 561 aaPredicted RBP13.53□□□□□ -0.24
USP49-203ENST00000394253 HERC6Q8IVU3 1022 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 ATL1Q8WXF7 558 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 AHCYL2Q96HN2 611 aaKnown RBP13.53□□□□□ -0.24
USP49-203ENST00000394253 APOL2Q9BQE5 337 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 TEX14Q8IWB6 1497 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 AP5Z1O43299 807 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 NTRK1P04629 796 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 CES1P23141 567 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 STOML3Q8TAV4 291 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 NELL1Q92832 810 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 MKNK1Q9BUB5 465 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 TNKS2Q9H2K2 1166 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 HERC3Q15034 1050 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 HSD17B12Q53GQ0 312 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 GPSM1Q86YR5 675 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 PNMA5Q96PV4 448 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 CATSPERZQ9NTU4 200 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 C9IYK1 514 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 MTA2O94776 668 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 PSKH1P11801 424 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 GJA9P57773 515 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 RFTN2Q52LD8 501 aaPredicted RBP13.53□□□□□ -0.24
USP49-203ENST00000394253 ARCQ7LC44 396 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 ZNF398Q8TD17 642 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 RIT2Q99578 217 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 EHD4Q9H223 541 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 MTF2Q9Y483 593 aaPredicted RBP13.53□□□□□ -0.24
USP49-203ENST00000394253 CHD5Q8TDI0 1954 aa13.53□□□□□ -0.24
USP49-203ENST00000394253 XKRYO14609 159 aa13.52□□□□□ -0.24
USP49-203ENST00000394253 MAPKAPK3Q16644 382 aa13.52□□□□□ -0.24
USP49-203ENST00000394253 ARHGEF40Q8TER5 1519 aa13.52□□□□□ -0.24
USP49-203ENST00000394253 CENPBD1B2RD01 187 aa13.52□□□□□ -0.24
USP49-203ENST00000394253 L7N2F9 121 aa13.52□□□□□ -0.24
USP49-203ENST00000394253 CD2P06729 351 aa13.52□□□□□ -0.24
USP49-203ENST00000394253 SNRPB2P08579 225 aaKnown RBP13.52□□□□□ -0.24
USP49-203ENST00000394253 IDO1P14902 403 aa13.52□□□□□ -0.24
USP49-203ENST00000394253 VAMP2P63027 116 aa13.52□□□□□ -0.24
USP49-203ENST00000394253 HYIQ5T013 277 aa13.52□□□□□ -0.24
USP49-203ENST00000394253 ATF7IP2Q5U623 682 aa13.52□□□□□ -0.24
USP49-203ENST00000394253 ACAD10Q6JQN1 1059 aa13.52□□□□□ -0.24
USP49-203ENST00000394253 TSEN15Q8WW01 171 aaKnown RBP13.52□□□□□ -0.24
USP49-203ENST00000394253 TAMM41Q96BW9 452 aa13.52□□□□□ -0.24
USP49-203ENST00000394253 PCDH9Q9HC56 1237 aa13.52□□□□□ -0.24
USP49-203ENST00000394253 ACADMP11310 421 aa13.52□□□□□ -0.24
USP49-203ENST00000394253 PRAMEF17Q5VTA0 474 aa13.52□□□□□ -0.24
USP49-203ENST00000394253 TMEM110Q86TL2 294 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms