RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 DIAPH1O60610 1272 aaKnown RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 HNRNPCL1O60812 293 aaKnown RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 VPS4BO75351 444 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 PMPCBO75439 489 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 DAB1O75553 588 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 GJB3O75712 270 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 RBBP9O75884 186 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 STAM2O75886 525 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 FAM155BO75949 473 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 UFL1O94874 794 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 TOXO94900 526 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 SGPL1O95470 568 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 VNN1O95497 513 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 NPTXRO95502 500 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 DUS4LO95620 317 aaKnown RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 ECDO95905 644 aaPredicted RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 BCL10O95999 233 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 CLPTM1O96005 669 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 IGHV4-39P01824 125 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 IGKV1-16P04430 117 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 LCKP06239 509 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 SLC3A2P08195 630 aaKnown RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 HMBSP08397 361 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 ATXN1LP0C7T5 689 aaKnown RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 SUPT20HL2P0C7V6 817 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF286BP0CG31 522 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 HNRNPCL4P0DMR1 293 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 PSG2P11465 335 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 ODC1P11926 461 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 PABPC1P11940 636 aaKnown RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 CDH1P12830 882 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 IFI30P13284 250 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 RNH1P13489 461 aaKnown RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 CREB1P16220 341 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 LGALS3P17931 250 aaKnown RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 CELP19835 753 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 LPOP22079 712 aaPredicted RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 GPX3P22352 226 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 JAK1P23458 1154 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 PTPN3P26045 913 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 MAPK1P28482 360 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 SSTR2P30874 369 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 FMO4P31512 558 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 TNFSF8P32971 234 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 CSTF2P33240 577 aaKnown RBP eCLIP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 CYP2C19P33261 490 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 HSPA4P34932 840 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 IDUAP35475 653 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 IGFALSP35858 605 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 ITGAEP38570 1179 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 THPOP40225 353 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 USP8P40818 1118 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 HALP42357 657 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 MAGEB1P43366 347 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 PTPN9P43378 593 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 LEPRP48357 1165 aaKnown RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 SOX2P48431 317 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 RXRGP48443 463 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 GIPRP48546 466 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 LHX1P48742 406 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 LMAN1P49257 510 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 VPS41P49754 854 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 MTHFSP49914 203 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 MECP2P51608 486 aaKnown RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF135P52742 658 aaPredicted RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 HAP1P54257 671 aaPredicted RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 EPHB1P54762 984 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 CASP7P55210 303 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 EIF6P56537 245 aaKnown RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 GPC5P78333 572 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 SRPK2P78362 688 aaKnown RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 KCNJ10P78508 379 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 TXNL4AP83876 142 aaKnown RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 SATB1Q01826 763 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 OCRLQ01968 901 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 SSRP1Q08945 709 aaKnown RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 FCHO2Q0JRZ9 810 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 PMPCAQ10713 525 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 FOXO1Q12778 655 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 PSMD2Q13200 908 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 PABPC4Q13310 644 aaKnown RBP eCLIP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 MOBPQ13875 183 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 PRKG1Q13976 671 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 CAMK1Q14012 370 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 PTK2BQ14289 1009 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 LRRC32Q14392 662 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 FASTKD3Q14CZ7 662 aaKnown RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 NECTIN1Q15223 517 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 NEUROD2Q15784 382 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF74Q16587 644 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 TAZQ16635 292 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 PTPROQ16827 1216 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 Q1RN00 199 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF284Q2VY69 593 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 SLC10A6Q3KNW5 377 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 GLE1Q53GS7 698 aaKnown RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 KRTCAP3Q53RY4 240 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 TMEM177Q53S58 311 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 DCAF6Q58WW2 860 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 SPIN3Q5JUX0 258 aa-0.3□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms