RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 IFITM3Q01628 133 aa15.16■□□□□ 0.02
CTNS-202ENST00000381870 PRKCEQ02156 737 aa15.16■□□□□ 0.02
CTNS-202ENST00000381870 CAMK2BQ13554 666 aa15.16■□□□□ 0.02
CTNS-202ENST00000381870 TRAPPC3LQ5T215 181 aa15.16■□□□□ 0.02
CTNS-202ENST00000381870 HEATR6Q6AI08 1181 aaKnown RBP15.16■□□□□ 0.02
CTNS-202ENST00000381870 OR6B2Q6IFH4 312 aa15.16■□□□□ 0.02
CTNS-202ENST00000381870 ZYG11AQ6WRX3 759 aa15.16■□□□□ 0.02
CTNS-202ENST00000381870 PIGZQ86VD9 579 aa15.16■□□□□ 0.02
CTNS-202ENST00000381870 BRSK2Q8IWQ3 736 aa15.16■□□□□ 0.02
CTNS-202ENST00000381870 ZC3H15Q8WU90 426 aaKnown RBP15.16■□□□□ 0.02
CTNS-202ENST00000381870 SEPT8Q92599 483 aa15.16■□□□□ 0.02
CTNS-202ENST00000381870 SH3YL1Q96HL8 342 aaPredicted RBP15.16■□□□□ 0.02
CTNS-202ENST00000381870 ZNF347Q96SE7 839 aa15.16■□□□□ 0.02
CTNS-202ENST00000381870 XYLT2Q9H1B5 865 aa15.16■□□□□ 0.02
CTNS-202ENST00000381870 ADAMTS10Q9H324 1103 aa15.16■□□□□ 0.02
CTNS-202ENST00000381870 SMARCAD1Q9H4L7 1026 aa15.16■□□□□ 0.02
CTNS-202ENST00000381870 PSME2Q9UL46 239 aa15.16■□□□□ 0.02
CTNS-202ENST00000381870 AP4E1Q9UPM8 1137 aa15.16■□□□□ 0.02
CTNS-202ENST00000381870 G3V3G9 751 aa15.16■□□□□ 0.02
CTNS-202ENST00000381870 SDHDO14521 159 aa15.16■□□□□ 0.02
CTNS-202ENST00000381870 ICAM1P05362 532 aa15.16■□□□□ 0.02
CTNS-202ENST00000381870 SAT1P21673 171 aa15.16■□□□□ 0.02
CTNS-202ENST00000381870 SLC7A2P52569 658 aa15.16■□□□□ 0.02
CTNS-202ENST00000381870 SELENBP1Q13228 472 aa15.16■□□□□ 0.02
CTNS-202ENST00000381870 PPIL2Q13356 520 aa15.16■□□□□ 0.02
CTNS-202ENST00000381870 EMC2Q15006 297 aa15.16■□□□□ 0.02
CTNS-202ENST00000381870 AGKQ53H12 422 aa15.16■□□□□ 0.02
CTNS-202ENST00000381870 DCAF8Q5TAQ9 597 aa15.16■□□□□ 0.02
CTNS-202ENST00000381870 CCDC60Q8IWA6 550 aaPredicted RBP15.16■□□□□ 0.02
CTNS-202ENST00000381870 COLGALT1Q8NBJ5 622 aa15.16■□□□□ 0.02
CTNS-202ENST00000381870 GLIS2Q9BZE0 524 aaPredicted RBP15.16■□□□□ 0.02
CTNS-202ENST00000381870 IL22Q9GZX6 179 aa15.16■□□□□ 0.02
CTNS-202ENST00000381870 UPF3AQ9H1J1 476 aaKnown RBP15.16■□□□□ 0.02
CTNS-202ENST00000381870 DBNDD1Q9H9R9 158 aa15.16■□□□□ 0.02
CTNS-202ENST00000381870 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.16■□□□□ 0.02
CTNS-202ENST00000381870 IFT80Q9P2H3 777 aaPredicted RBP15.16■□□□□ 0.02
CTNS-202ENST00000381870 KLHL3Q9UH77 587 aa15.16■□□□□ 0.02
CTNS-202ENST00000381870 SARDHQ9UL12 918 aa15.16■□□□□ 0.02
CTNS-202ENST00000381870 EI24O14681 340 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 CPNE6O95741 557 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 PIGRP01833 764 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 MPOP05164 745 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 POLBP06746 335 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 RAD23AP54725 363 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 CSE1LP55060 971 aaKnown RBP15.15■□□□□ 0.02
CTNS-202ENST00000381870 STX5Q13190 355 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 INAVAQ3KP66 663 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 TIGD2Q4W5G0 525 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 FAM219BQ5XKK7 198 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 FAM183BPQ6ZVS7 135 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 VASH1Q7L8A9 365 aaPredicted RBP15.15■□□□□ 0.02
CTNS-202ENST00000381870 Q8N9G6 341 aaPredicted RBP15.15■□□□□ 0.02
CTNS-202ENST00000381870 KDM1BQ8NB78 822 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 SHCBP1Q8NEM2 672 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 USP33Q8TEY7 942 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 QKIQ96PU8 341 aaKnown RBP eCLIP15.15■□□□□ 0.02
CTNS-202ENST00000381870 TSPAN18Q96SJ8 248 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 TMEM181Q9P2C4 612 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 ADAM28Q9UKQ2 775 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 PSME4Q14997 1843 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 CLDN25C9JDP6 229 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 PPEF1O14829 653 aaPredicted RBP15.15■□□□□ 0.02
CTNS-202ENST00000381870 EEF1B2P24534 225 aaKnown RBP15.15■□□□□ 0.02
CTNS-202ENST00000381870 CA8P35219 290 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 GPD2P43304 727 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 HLCSP50747 726 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 TPTEP56180 551 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 SPCS2Q15005 226 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 ATP6AP1Q15904 470 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 DUOXA2Q1HG44 320 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 SMUG1Q53HV7 270 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 BOLA3Q53S33 107 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 AGAP7PQ5VUJ5 663 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 FRA10AC1Q70Z53 315 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 SPPL2CQ8IUH8 684 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 PELI3Q8N2H9 469 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 CCNYL1Q8N7R7 359 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 SCYL1Q96KG9 808 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 ZMAT2Q96NC0 199 aaKnown RBP15.15■□□□□ 0.02
CTNS-202ENST00000381870 LGMNQ99538 433 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 TUBA1CQ9BQE3 449 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 LHPPQ9H008 270 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 RAD21L1Q9H4I0 556 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 AGPAT4Q9NRZ5 378 aa15.15■□□□□ 0.02
CTNS-202ENST00000381870 CCM2LQ9NUG4 571 aaPredicted RBP15.15■□□□□ 0.02
CTNS-202ENST00000381870 A6NL46 340 aa15.14■□□□□ 0.01
CTNS-202ENST00000381870 SLCO1B7G3V0H7 640 aa15.14■□□□□ 0.01
CTNS-202ENST00000381870 MRASO14807 208 aa15.14■□□□□ 0.01
CTNS-202ENST00000381870 ACOX3O15254 700 aa15.14■□□□□ 0.01
CTNS-202ENST00000381870 SEC14L2O76054 403 aa15.14■□□□□ 0.01
CTNS-202ENST00000381870 ZBTB7AO95365 584 aa15.14■□□□□ 0.01
CTNS-202ENST00000381870 NCAM1P13591 858 aa15.14■□□□□ 0.01
CTNS-202ENST00000381870 ELK4P28324 431 aa15.14■□□□□ 0.01
CTNS-202ENST00000381870 HK2P52789 917 aa15.14■□□□□ 0.01
CTNS-202ENST00000381870 ZBTB17Q13105 803 aa15.14■□□□□ 0.01
CTNS-202ENST00000381870 FASTKQ14296 549 aaKnown RBP15.14■□□□□ 0.01
CTNS-202ENST00000381870 CYBRD1Q53TN4 286 aa15.14■□□□□ 0.01
CTNS-202ENST00000381870 SLC27A3Q5K4L6 730 aa15.14■□□□□ 0.01
CTNS-202ENST00000381870 SAMD4BQ5PRF9 694 aaKnown RBP15.14■□□□□ 0.01
CTNS-202ENST00000381870 FAM160B2Q86V87 743 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms